RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C TVP38P36164 337 aa2.88□□□□□ -1.95
LCB4YOR171C LYS12P40495 371 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C SYG1P40528 902 aa2.88□□□□□ -1.95
LCB4YOR171C CFD1P40558 293 aa2.88□□□□□ -1.95
LCB4YOR171C CTK3P46963 296 aaPredicted RBP2.88□□□□□ -1.95
LCB4YOR171C YJL016WP47072 561 aa2.88□□□□□ -1.95
LCB4YOR171C YJR030CP47101 745 aa2.88□□□□□ -1.95
LCB4YOR171C YJR079WP47126 109 aa2.88□□□□□ -1.95
LCB4YOR171C PMT5P52867 743 aa2.88□□□□□ -1.95
LCB4YOR171C MMS2P53152 137 aa2.88□□□□□ -1.95
LCB4YOR171C MKC7P53379 596 aa2.88□□□□□ -1.95
LCB4YOR171C CSN9Q03981 162 aa2.88□□□□□ -1.95
LCB4YOR171C VBA1Q04301 562 aa2.88□□□□□ -1.95
LCB4YOR171C NAT4Q04751 285 aa2.88□□□□□ -1.95
LCB4YOR171C NOC4Q06512 552 aaPredicted RBP2.88□□□□□ -1.95
LCB4YOR171C RRP40Q08285 240 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C SGT1Q08446 395 aa2.88□□□□□ -1.95
LCB4YOR171C TPO4Q12256 659 aa2.88□□□□□ -1.95
LCB4YOR171C TAF2P23255 1407 aa2.88□□□□□ -1.95
LCB4YOR171C SEC22P22214 214 aa2.88□□□□□ -1.95
LCB4YOR171C IFM1P25038 676 aa2.88□□□□□ -1.95
LCB4YOR171C SAC1P32368 623 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C CUE1P38428 203 aa2.88□□□□□ -1.95
LCB4YOR171C RCK2P38623 610 aa2.88□□□□□ -1.95
LCB4YOR171C GRE3P38715 327 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
LCB4YOR171C CIN4P39110 191 aa2.88□□□□□ -1.95
LCB4YOR171C DHH1P39517 506 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C YER079WP40052 210 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C RRG9P40156 214 aa2.88□□□□□ -1.95
LCB4YOR171C PRE6P40303 254 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C MIC26P50087 233 aa2.88□□□□□ -1.95
LCB4YOR171C PEX31P53203 462 aa2.88□□□□□ -1.95
LCB4YOR171C RHO3Q00245 231 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C NUP53Q03790 475 aa2.88□□□□□ -1.95
LCB4YOR171C YMR315WQ04869 349 aaKnown RBP2.88□□□□□ -1.95
LCB4YOR171C LDS2Q08218 356 aa2.88□□□□□ -1.95
LCB4YOR171C SPA2P23201 1466 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C RPL25P04456 142 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C CTA1P15202 515 aa2.87□□□□□ -1.95
LCB4YOR171C MCK1P21965 375 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C PRE7P23724 241 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C SUA7P29055 345 aaPredicted RBP2.87□□□□□ -1.95
LCB4YOR171C PMT2P31382 759 aa2.87□□□□□ -1.95
LCB4YOR171C ATO2P32907 282 aa2.87□□□□□ -1.95
LCB4YOR171C MRPS5P33759 307 aa2.87□□□□□ -1.95
LCB4YOR171C YKL187CP34231 750 aa2.87□□□□□ -1.95
LCB4YOR171C YKR041WP36134 250 aa2.87□□□□□ -1.95
LCB4YOR171C ARP1P38696 384 aa2.87□□□□□ -1.95
LCB4YOR171C EFM1P38732 585 aa2.87□□□□□ -1.95
LCB4YOR171C TDA11P38854 504 aa2.87□□□□□ -1.95
LCB4YOR171C MET30P39014 640 aa2.87□□□□□ -1.95
LCB4YOR171C SMB1P40018 196 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C YER076CP40049 302 aa2.87□□□□□ -1.95
LCB4YOR171C IRC18P47056 224 aa2.87□□□□□ -1.95
LCB4YOR171C YJR011CP47086 261 aaPredicted RBP2.87□□□□□ -1.95
LCB4YOR171C GPI14P47088 403 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C TIS11P47977 285 aa2.87□□□□□ -1.95
LCB4YOR171C POP6P53218 158 aa2.87□□□□□ -1.95
LCB4YOR171C YNL095CP53932 642 aa2.87□□□□□ -1.95
LCB4YOR171C CDC14Q00684 551 aa2.87□□□□□ -1.95
LCB4YOR171C STP1Q00947 519 aa2.87□□□□□ -1.95
LCB4YOR171C MSS11Q03825 758 aa2.87□□□□□ -1.95
LCB4YOR171C GRX8Q05926 109 aa2.87□□□□□ -1.95
LCB4YOR171C SNT309Q06091 175 aaPredicted RBP2.87□□□□□ -1.95
LCB4YOR171C HTZ1Q12692 134 aaKnown RBP2.87□□□□□ -1.95
LCB4YOR171C SLO1Q3E784 85 aa2.87□□□□□ -1.95
LCB4YOR171C RIB3Q99258 208 aa2.87□□□□□ -1.95
LCB4YOR171C STH1P32597 1359 aa2.87□□□□□ -1.95
LCB4YOR171C TPK3P05986 398 aa2.86□□□□□ -1.95
LCB4YOR171C CBP6P07253 162 aaPredicted RBP2.86□□□□□ -1.95
LCB4YOR171C NSP1P14907 823 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C PET9P18239 318 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C SCL1P21243 252 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C RSA4P25382 515 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C TFC1P32367 649 aa2.86□□□□□ -1.95
LCB4YOR171C SPS18P32572 300 aa2.86□□□□□ -1.95
LCB4YOR171C VAM7P32912 316 aa2.86□□□□□ -1.95
LCB4YOR171C NTF2P33331 125 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C SKN1P33336 771 aa2.86□□□□□ -1.95
LCB4YOR171C JEN1P36035 616 aa2.86□□□□□ -1.95
LCB4YOR171C SCO2P38072 301 aa2.86□□□□□ -1.95
LCB4YOR171C TRM7P38238 310 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C POP4P38336 279 aa2.86□□□□□ -1.95
LCB4YOR171C FLO5P38894 1075 aa2.86□□□□□ -1.95
LCB4YOR171C SAS2P40963 338 aa2.86□□□□□ -1.95
LCB4YOR171C ILM1P47155 203 aa2.86□□□□□ -1.95
LCB4YOR171C NUP57P48837 541 aa2.86□□□□□ -1.95
LCB4YOR171C UBP8P50102 471 aa2.86□□□□□ -1.95
LCB4YOR171C UFD1P53044 361 aa2.86□□□□□ -1.95
LCB4YOR171C BRR6P53062 197 aa2.86□□□□□ -1.95
LCB4YOR171C USE1P53146 245 aa2.86□□□□□ -1.95
LCB4YOR171C MPA43P53583 542 aaPredicted RBP2.86□□□□□ -1.95
LCB4YOR171C RPL15BP54780 204 aaPredicted RBP2.86□□□□□ -1.95
LCB4YOR171C YML122CQ03207 126 aa2.86□□□□□ -1.95
LCB4YOR171C HER2Q03557 464 aa2.86□□□□□ -1.95
LCB4YOR171C GAS2Q06135 555 aa2.86□□□□□ -1.95
LCB4YOR171C YOR283WQ12040 230 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C APC9Q12107 265 aa2.86□□□□□ -1.95
LCB4YOR171C YLR050CQ12155 161 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C RGT2Q12300 763 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms