RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ODC2Q99297 307 aa6.77□□□□□ -1.32
RUP1YOR138C SAC7P17121 654 aa6.77□□□□□ -1.33
RUP1YOR138C TIP1P27654 210 aaPredicted RBP6.77□□□□□ -1.33
RUP1YOR138C PMT2P31382 759 aa6.77□□□□□ -1.33
RUP1YOR138C PRO1P32264 428 aa6.77□□□□□ -1.33
RUP1YOR138C OCA5P38738 679 aa6.77□□□□□ -1.33
RUP1YOR138C ANS1P38832 159 aa6.77□□□□□ -1.33
RUP1YOR138C SKN7P38889 622 aa6.77□□□□□ -1.33
RUP1YOR138C YIL060WP40519 144 aa6.77□□□□□ -1.33
RUP1YOR138C SLS1P42900 643 aa6.77□□□□□ -1.33
RUP1YOR138C YGL235WP53071 178 aa6.77□□□□□ -1.33
RUP1YOR138C OKP1P53298 406 aa6.77□□□□□ -1.33
RUP1YOR138C GIM3P53900 129 aa6.77□□□□□ -1.33
RUP1YOR138C NPC2Q12408 173 aa6.77□□□□□ -1.33
RUP1YOR138C TFB5Q3E7C1 72 aaPredicted RBP6.77□□□□□ -1.33
RUP1YOR138C SEC22P22214 214 aa6.76□□□□□ -1.33
RUP1YOR138C ECM25P32525 599 aa6.76□□□□□ -1.33
RUP1YOR138C ISC10P32645 267 aa6.76□□□□□ -1.33
RUP1YOR138C PAN3P36102 679 aaPredicted RBP6.76□□□□□ -1.33
RUP1YOR138C FMP46P36141 133 aaKnown RBP6.76□□□□□ -1.33
RUP1YOR138C SDS24P38314 527 aa6.76□□□□□ -1.33
RUP1YOR138C MNL1P38888 796 aa6.76□□□□□ -1.33
RUP1YOR138C LYS1P38998 373 aaRIP-Chip data6.76□□□□□ -1.33 RIP-Chip
RUP1YOR138C GIP2P40036 548 aa6.76□□□□□ -1.33
RUP1YOR138C OTU1P43558 301 aa6.76□□□□□ -1.33
RUP1YOR138C PHO23P50947 330 aa6.76□□□□□ -1.33
RUP1YOR138C NAM8Q00539 523 aaKnown RBP6.76□□□□□ -1.33
RUP1YOR138C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
RUP1YOR138C CTF19Q02732 369 aa6.76□□□□□ -1.33
RUP1YOR138C RSM28Q03430 361 aa6.76□□□□□ -1.33
RUP1YOR138C YPR127WQ06494 345 aa6.76□□□□□ -1.33
RUP1YOR138C HRT1Q08273 121 aa6.76□□□□□ -1.33
RUP1YOR138C PCC1Q3E833 88 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-DR4O74302 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-AP0CX57 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-PR1P0CX58 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-ORP0CX59 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-PR2P0CX60 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-DR5P0CX65 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-ER2P0CX66 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-GR3P0CX67 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-LR1P0CX68 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-MR2P0CX69 440 aa6.76□□□□□ -1.33
RUP1YOR138C NFS1P25374 497 aa6.76□□□□□ -1.33
RUP1YOR138C EMP24P32803 203 aaKnown RBP6.76□□□□□ -1.33
RUP1YOR138C BET3P36149 193 aa6.76□□□□□ -1.33
RUP1YOR138C VBA2P38358 474 aaKnown RBP6.76□□□□□ -1.33
RUP1YOR138C GCV3P39726 170 aaPredicted RBP6.76□□□□□ -1.33
RUP1YOR138C VPS52P39904 641 aa6.76□□□□□ -1.33
RUP1YOR138C NAS2P40555 220 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-JR2P47099 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-DR1Q03856 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-ML1Q04706 440 aaKnown RBP6.76□□□□□ -1.33
RUP1YOR138C YPR091CQ06833 770 aa6.76□□□□□ -1.33
RUP1YOR138C RTK1Q12100 620 aaPredicted RBP6.76□□□□□ -1.33
RUP1YOR138C TY1A-BRQ12217 440 aa6.76□□□□□ -1.33
RUP1YOR138C YRM1Q12340 786 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-NL2Q12470 440 aa6.76□□□□□ -1.33
RUP1YOR138C TY1A-GR2Q12485 440 aa6.76□□□□□ -1.33
RUP1YOR138C GAL7P08431 366 aa6.75□□□□□ -1.33
RUP1YOR138C PUT1P09368 476 aa6.75□□□□□ -1.33
RUP1YOR138C SSA3P09435 649 aaKnown RBP6.75□□□□□ -1.33
RUP1YOR138C DBF20P32328 564 aa6.75□□□□□ -1.33
RUP1YOR138C PUG1P40100 303 aa6.75□□□□□ -1.33
RUP1YOR138C CIN2P46670 268 aa6.75□□□□□ -1.33
RUP1YOR138C YGL204CP53089 101 aa6.75□□□□□ -1.33
RUP1YOR138C TYW3P53177 273 aa6.75□□□□□ -1.33
RUP1YOR138C YGR026WP53217 278 aa6.75□□□□□ -1.33
RUP1YOR138C YGR250CP53316 781 aaKnown RBP6.75□□□□□ -1.33
RUP1YOR138C SPR28Q04921 423 aa6.75□□□□□ -1.33
RUP1YOR138C YPL272CQ08984 517 aa6.75□□□□□ -1.33
RUP1YOR138C LEU9Q12166 604 aaKnown RBP6.75□□□□□ -1.33
RUP1YOR138C WHI5Q12416 295 aa6.75□□□□□ -1.33
RUP1YOR138C FUR4P05316 633 aaKnown RBP6.74□□□□□ -1.33
RUP1YOR138C RPS14AP06367 137 aaKnown RBP6.74□□□□□ -1.33
RUP1YOR138C GAS1P22146 559 aaKnown RBP6.74□□□□□ -1.33
RUP1YOR138C CWH43P25618 953 aa6.74□□□□□ -1.33
RUP1YOR138C NAB2P32505 525 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RUP1YOR138C NRP1P32770 719 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RUP1YOR138C SPT10P35208 640 aa6.74□□□□□ -1.33
RUP1YOR138C RPP1P38786 293 aa6.74□□□□□ -1.33
RUP1YOR138C RPS14BP39516 138 aaKnown RBP6.74□□□□□ -1.33
RUP1YOR138C SMB1P40018 196 aaKnown RBP6.74□□□□□ -1.33
RUP1YOR138C COQ5P49017 307 aa6.74□□□□□ -1.33
RUP1YOR138C NRK1P53915 240 aa6.74□□□□□ -1.33
RUP1YOR138C YPL113CQ02961 396 aa6.74□□□□□ -1.33
RUP1YOR138C ODC1Q03028 310 aa6.74□□□□□ -1.33
RUP1YOR138C RDR1Q08904 546 aa6.74□□□□□ -1.33
RUP1YOR138C RRI1Q12468 440 aa6.74□□□□□ -1.33
RUP1YOR138C MTC7P32633 139 aa6.74□□□□□ -1.33
RUP1YOR138C FLO10P36170 1169 aa6.74□□□□□ -1.33
RUP1YOR138C TDA7P53882 636 aaPredicted RBP6.74□□□□□ -1.33
RUP1YOR138C NOC4Q06512 552 aaPredicted RBP6.74□□□□□ -1.33
RUP1YOR138C LUC7Q07508 261 aaPredicted RBP6.74□□□□□ -1.33
RUP1YOR138C GLO4Q12320 285 aa6.74□□□□□ -1.33
RUP1YOR138C AHC1Q12433 566 aa6.74□□□□□ -1.33
RUP1YOR138C VMA9Q3E7B6 73 aa6.74□□□□□ -1.33
RUP1YOR138C MEX67Q99257 599 aaKnown RBP6.74□□□□□ -1.33
RUP1YOR138C RPL20AP0CX23 172 aaKnown RBP6.73□□□□□ -1.33
RUP1YOR138C RPL20BP0CX24 172 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms