RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	RAP1	P11938	827 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	PHO81	P17442	1178 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	DBP3	P20447	523 aa	Known RBP	4.07	□□□□□ -1.76
RCL1	YOL010W	CCA1	P21269	546 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	CLB2	P24869	491 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	NPL6	P32832	435 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	STP2	P38704	541 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	RCY1	P39531	840 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	YER137C	P40083	148 aa	Known RBP	4.07	□□□□□ -1.76
RCL1	YOL010W	IMA5	P40884	581 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	CIN5	P40917	295 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	EGT2	P42835	1041 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	MOB2	P43563	287 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	MRPL50	P53724	139 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	DBP6	P53734	629 aa	Known RBP	4.07	□□□□□ -1.76
RCL1	YOL010W	ASI2	P53895	289 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	EOS1	P53938	366 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	SMX3	P54999	86 aa	Predicted RBP	4.07	□□□□□ -1.76
RCL1	YOL010W	SKO1	Q02100	647 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	SWP1	Q02795	286 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	PRM15	Q03262	622 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	PLP1	Q04004	230 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	RIM9	Q04734	239 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	NAT4	Q04751	285 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	YPR202W	Q08993	238 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	SET6	Q12529	373 aa		4.07	□□□□□ -1.76
RCL1	YOL010W	RPS1B	P23248	255 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	CLB3	P24870	427 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	BOS1	P25385	244 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	VMA6	P32366	345 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	NGG1	P32494	702 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	RPT5	P33297	434 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	YKL069W	P36088	180 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	ZTA1	P38230	334 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	NSG1	P38837	291 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	SUR2	P38992	349 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	MNN9	P39107	395 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	GPP2	P40106	250 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	HIS6	P40545	261 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	NIT2	P47016	307 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	DIA3	P52290	468 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	PEF1	P53238	335 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	ARC35	P53731	342 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	RHO5	P53879	331 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	CRZ1	P53968	678 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	SAM50	P53969	484 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	SED1	Q01589	338 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	YPL039W	Q03080	316 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	UGO1	Q03327	502 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	SNX41	Q04053	625 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	VBA4	Q04602	768 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	VPS36	Q06696	566 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	DTD1	Q07648	150 aa	Known RBP	4.06	□□□□□ -1.76
RCL1	YOL010W	ATP16	Q12165	160 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	YOR214C	Q12282	236 aa		4.06	□□□□□ -1.76
RCL1	YOL010W	TPK2	P06245	380 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	YCR016W	P25617	290 aa	Known RBP	4.05	□□□□□ -1.76
RCL1	YOL010W	CSM1	P25651	190 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	RAD14	P28519	371 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	ATP7	P30902	174 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	YPT7	P32939	208 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	SUR1	P33300	382 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	RCK1	P38622	512 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	BIG1	P38813	335 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	ANS1	P38832	159 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	YER121W	P40076	114 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	YNL208W	P40159	199 aa	Known RBP	4.05	□□□□□ -1.76
RCL1	YOL010W	SMK1	P41808	388 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	YFR054C	P43622	192 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	TWF1	P53250	332 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	YAP1802	P53309	568 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	INP1	Q03694	420 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	FMN1	Q03778	218 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	RAD30	Q04049	632 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	MGR3	Q04472	501 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	GIM5	Q04493	163 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	BCP1	Q06338	283 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	MFG1	Q07684	458 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	CSI2	Q08054	341 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	AEP3	Q12089	606 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	BSC1	Q12140	328 aa		4.05	□□□□□ -1.76
RCL1	YOL010W	HTZ1	Q12692	134 aa	Known RBP	4.05	□□□□□ -1.76
RCL1	YOL010W	RPS21B	Q3E754	87 aa	Known RBP	4.05	□□□□□ -1.76
RCL1	YOL010W	THP2	O13539	261 aa	Known RBP	4.04	□□□□□ -1.76
RCL1	YOL010W	ATP6	P00854	259 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	ARG3	P05150	338 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	RHO1	P06780	209 aa	Known RBP	4.04	□□□□□ -1.76
RCL1	YOL010W	ARG80	P07249	177 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	PUT2	P07275	575 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	RPL35A	P0CX84	120 aa	Known RBP	4.04	□□□□□ -1.76
RCL1	YOL010W	RPL35B	P0CX85	120 aa	Known RBP	4.04	□□□□□ -1.76
RCL1	YOL010W	MSI1	P13712	422 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	EHD3	P28817	500 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	SEC66	P33754	206 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	SIP2	P34164	415 aa	Known RBP	4.04	□□□□□ -1.76
RCL1	YOL010W	ROT2	P38138	954 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	IST2	P38250	946 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	YER184C	P39961	794 aa		4.04	□□□□□ -1.76
RCL1	YOL010W	YGR201C	P42936	225 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms