RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W KEG1P43614 200 aa6.23□□□□□ -1.41
HDA1YNL021W SPR6Q01684 191 aa6.23□□□□□ -1.41
HDA1YNL021W HRT3Q12347 344 aa6.23□□□□□ -1.41
HDA1YNL021W GPA2P10823 449 aa6.22□□□□□ -1.41
HDA1YNL021W YCR100CP25606 316 aa6.22□□□□□ -1.41
HDA1YNL021W ERG9P29704 444 aa6.22□□□□□ -1.41
HDA1YNL021W YEF1P32622 495 aa6.22□□□□□ -1.41
HDA1YNL021W YBR032WP38223 100 aa6.22□□□□□ -1.41
HDA1YNL021W YBR062CP38239 180 aa6.22□□□□□ -1.41
HDA1YNL021W VPS25P47142 202 aa6.22□□□□□ -1.41
HDA1YNL021W BET5Q03630 159 aa6.22□□□□□ -1.41
HDA1YNL021W GRX8Q05926 109 aa6.22□□□□□ -1.41
HDA1YNL021W TPO3Q06451 622 aa6.22□□□□□ -1.41
HDA1YNL021W YET3Q07451 203 aa6.22□□□□□ -1.41
HDA1YNL021W YDL109CQ12103 647 aa6.22□□□□□ -1.41
HDA1YNL021W YLR112WQ12130 139 aa6.22□□□□□ -1.41
HDA1YNL021W YLR108CQ12259 485 aa6.22□□□□□ -1.41
HDA1YNL021W URA10P30402 227 aa6.22□□□□□ -1.41
HDA1YNL021W IES6P32617 166 aa6.22□□□□□ -1.41
HDA1YNL021W YKL187CP34231 750 aa6.22□□□□□ -1.41
HDA1YNL021W SWD2P36104 329 aaPredicted RBP6.22□□□□□ -1.41
HDA1YNL021W YBP1P38315 674 aa6.22□□□□□ -1.41
HDA1YNL021W MRPL50P53724 139 aa6.22□□□□□ -1.41
HDA1YNL021W SPG3Q04398 127 aaPredicted RBP6.22□□□□□ -1.41
HDA1YNL021W SNA4Q07549 140 aa6.22□□□□□ -1.41
HDA1YNL021W YLR053CQ12026 108 aa6.22□□□□□ -1.41
HDA1YNL021W RPL35AP0CX84 120 aaKnown RBP6.21□□□□□ -1.42
HDA1YNL021W RPL35BP0CX85 120 aaKnown RBP6.21□□□□□ -1.42
HDA1YNL021W OMA1P36163 345 aa6.21□□□□□ -1.42
HDA1YNL021W HEK2P38199 381 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
HDA1YNL021W YAT2P40017 923 aa6.21□□□□□ -1.42
HDA1YNL021W YPL225WQ08971 146 aaKnown RBP6.21□□□□□ -1.42
HDA1YNL021W RGT2Q12300 763 aa6.21□□□□□ -1.42
HDA1YNL021W EXG1P23776 448 aaKnown RBP6.2□□□□□ -1.42
HDA1YNL021W YEL028WP39989 153 aa6.2□□□□□ -1.42
HDA1YNL021W SEC13Q04491 297 aaKnown RBP6.2□□□□□ -1.42
HDA1YNL021W ACF2Q12168 779 aa6.2□□□□□ -1.42
HDA1YNL021W TPT1Q12272 230 aaKnown RBP6.2□□□□□ -1.42
HDA1YNL021W RPL31AP0C2H8 113 aaKnown RBP6.2□□□□□ -1.42
HDA1YNL021W REV1P12689 985 aa6.2□□□□□ -1.42
HDA1YNL021W CAP2P13517 287 aa6.2□□□□□ -1.42
HDA1YNL021W TIP1P27654 210 aaPredicted RBP6.2□□□□□ -1.42
HDA1YNL021W NUF2P33895 451 aa6.2□□□□□ -1.42
HDA1YNL021W CHK1P38147 527 aa6.2□□□□□ -1.42
HDA1YNL021W RBG1P39729 369 aa6.2□□□□□ -1.42
HDA1YNL021W PAC2P39937 518 aa6.2□□□□□ -1.42
HDA1YNL021W IRC7P43623 340 aa6.2□□□□□ -1.42
HDA1YNL021W TMA22P47089 198 aaPredicted RBP6.2□□□□□ -1.42
HDA1YNL021W SLX9P53251 210 aaPredicted RBP6.2□□□□□ -1.42
HDA1YNL021W NOP19P53317 196 aaPredicted RBP6.2□□□□□ -1.42
HDA1YNL021W ODC1Q03028 310 aa6.2□□□□□ -1.42
HDA1YNL021W VPS74Q06385 345 aa6.2□□□□□ -1.42
HDA1YNL021W HIS1P00498 297 aaKnown RBP6.19□□□□□ -1.42
HDA1YNL021W EDC3P39998 551 aaKnown RBP6.19□□□□□ -1.42
HDA1YNL021W SPC24Q04477 213 aa6.19□□□□□ -1.42
HDA1YNL021W STE18P18852 110 aa6.19□□□□□ -1.42
HDA1YNL021W YCR022CP25620 114 aa6.19□□□□□ -1.42
HDA1YNL021W NUP2P32499 720 aa6.19□□□□□ -1.42
HDA1YNL021W SPS19P32573 292 aaKnown RBP6.19□□□□□ -1.42
HDA1YNL021W YNL194CP40169 301 aa6.19□□□□□ -1.42
HDA1YNL021W ASR1Q06834 288 aa6.19□□□□□ -1.42
HDA1YNL021W YDR157WA0A023PZE8 133 aa6.18□□□□□ -1.42
HDA1YNL021W TUB1P09733 447 aaKnown RBP6.18□□□□□ -1.42
HDA1YNL021W RNQ1P25367 405 aa6.18□□□□□ -1.42
HDA1YNL021W ATP7P30902 174 aa6.18□□□□□ -1.42
HDA1YNL021W VPS21P36017 210 aaKnown RBP6.18□□□□□ -1.42
HDA1YNL021W RFS1P38234 210 aaKnown RBP6.18□□□□□ -1.42
HDA1YNL021W GDS1P41913 522 aa6.18□□□□□ -1.42
HDA1YNL021W JHD2P47156 728 aaPredicted RBP6.18□□□□□ -1.42
HDA1YNL021W YPL077CQ02831 240 aa6.18□□□□□ -1.42
HDA1YNL021W YMR226CQ05016 267 aaKnown RBP6.18□□□□□ -1.42
HDA1YNL021W SWC7Q06707 132 aa6.18□□□□□ -1.42
HDA1YNL021W YRA1Q12159 226 aaKnown RBP6.18□□□□□ -1.42
HDA1YNL021W YLR422WQ06409 1932 aa6.18□□□□□ -1.42
HDA1YNL021W YMR31P19955 123 aa6.17□□□□□ -1.42
HDA1YNL021W PDR3P33200 976 aa6.17□□□□□ -1.42
HDA1YNL021W TIR2P33890 251 aa6.17□□□□□ -1.42
HDA1YNL021W PRS2P38620 318 aaKnown RBP6.17□□□□□ -1.42
HDA1YNL021W YHK8P38776 514 aa6.17□□□□□ -1.42
HDA1YNL021W GEP4P38812 185 aa6.17□□□□□ -1.42
HDA1YNL021W RTS2P40962 232 aa6.17□□□□□ -1.42
HDA1YNL021W YFL012WP43580 148 aa6.17□□□□□ -1.42
HDA1YNL021W GWT1P47026 490 aa6.17□□□□□ -1.42
HDA1YNL021W SLI1P53304 468 aa6.17□□□□□ -1.42
HDA1YNL021W ZRG17P53735 605 aa6.17□□□□□ -1.42
HDA1YNL021W MRPL51Q06090 140 aaPredicted RBP6.17□□□□□ -1.42
HDA1YNL021W ZRT1P32804 376 aa6.17□□□□□ -1.42
HDA1YNL021W VPS51P36116 164 aa6.17□□□□□ -1.42
HDA1YNL021W ECM13P38195 257 aa6.17□□□□□ -1.42
HDA1YNL021W DDI1P40087 428 aa6.17□□□□□ -1.42
HDA1YNL021W PEP8P40335 379 aa6.17□□□□□ -1.42
HDA1YNL021W RCF2P53721 224 aa6.17□□□□□ -1.42
HDA1YNL021W CAF40P53829 373 aa6.17□□□□□ -1.42
HDA1YNL021W YNL181WP53878 407 aa6.17□□□□□ -1.42
HDA1YNL021W IRC15Q02733 499 aa6.17□□□□□ -1.42
HDA1YNL021W TIM18Q08749 192 aa6.17□□□□□ -1.42
HDA1YNL021W YDL009CQ12210 107 aa6.17□□□□□ -1.42
HDA1YNL021W MEX67Q99257 599 aaKnown RBP6.17□□□□□ -1.42
HDA1YNL021W CMK2P22517 447 aa6.16□□□□□ -1.42
HDA1YNL021W RPC19P28000 142 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms