RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	KRE29	P40026	464 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	GCN20	P43535	752 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	IMD4	P50094	524 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	GPI1	P53306	609 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	ASI2	P53895	289 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	ACS1	Q01574	713 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	DPB4	Q04603	196 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	SYO1	Q07395	620 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	SKI7	Q08491	747 aa	Predicted RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
ATM1	YMR301C	YDL176W	Q12027	708 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	ISA2	Q12425	185 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	MRX4	Q12467	430 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	YBR126W-A	Q8TGU7	68 aa		4.12	□□□□□ -1.75
ATM1	YMR301C	DET1	Q99288	334 aa	Known RBP	4.12	□□□□□ -1.75
ATM1	YMR301C	TIM9	O74700	87 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	ATP2	P00830	511 aa	Known RBP	4.11	□□□□□ -1.75
ATM1	YMR301C	RHB1	P25378	209 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	VPS17	P32913	551 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	RIB1	P38066	345 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	QRI1	P43123	477 aa	Known RBP	4.11	□□□□□ -1.75
ATM1	YMR301C	MOB2	P43563	287 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	IRC7	P43623	340 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	DUO1	P53168	247 aa	Known RBP	4.11	□□□□□ -1.75
ATM1	YMR301C	GET1	P53192	235 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	YNR062C	P53748	327 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	ERV25	P54837	211 aa	Known RBP	4.11	□□□□□ -1.75
ATM1	YMR301C	ASM4	Q05166	528 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	YPR147C	Q06522	304 aa	Known RBP	4.11	□□□□□ -1.75
ATM1	YMR301C	ASA1	Q06822	443 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	COQ10	Q08058	207 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	MHF2	Q3E829	80 aa		4.11	□□□□□ -1.75
ATM1	YMR301C	PRE4	P30657	266 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	HIS7	P33734	552 aa	Known RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	YBR220C	P38318	560 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	RPP1	P38786	293 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	AIM10	P39965	576 aa	Known RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	YIL012W	P40551	113 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	NAS2	P40555	220 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	MIG2	P53035	382 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	BRR6	P53062	197 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	MAL12	P53341	584 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	TEX1	P53851	422 aa	Known RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	YPL108W	Q02872	168 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	BCP1	Q06338	283 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	MHF1	Q3E835	90 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	YLR415C	O13578	112 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	SIR3	P06701	978 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	PEP4	P07267	405 aa	Known RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	PRB1	P09232	635 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
ATM1	YMR301C	SNC1	P31109	117 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	ECM15	P35195	104 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	GPX1	P36014	167 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	JEN1	P36035	616 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	SRO77	P38163	1010 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	MAM33	P40513	266 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	TMA22	P47089	198 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	MPP6	P53725	186 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	YAP6	Q03935	383 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	HRT1	Q08273	121 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	RKM1	Q08961	583 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	NIP7	Q08962	181 aa	Known RBP	4.1	□□□□□ -1.75
ATM1	YMR301C	TAF3	Q12297	353 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	HMS1	Q12398	434 aa		4.1	□□□□□ -1.75
ATM1	YMR301C	MET17	P06106	444 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	NUP1	P20676	1076 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	CMK2	P22517	447 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	ERG3	P32353	365 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	TRS65	P32893	560 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	SKG1	P36169	355 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	RCY1	P39531	840 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	CAK1	P43568	368 aa	Predicted RBP	4.09	□□□□□ -1.75
ATM1	YMR301C	YGL235W	P53071	178 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	CIK1	Q01649	594 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	SPR6	Q01684	191 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	RCE1	Q03530	315 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	SSY1	Q03770	852 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	GTB1	Q04924	702 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	YPR127W	Q06494	345 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	PML1	Q07930	204 aa	Predicted RBP	4.09	□□□□□ -1.75
ATM1	YMR301C	OSW1	Q08692	278 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	ADF1	Q2V2Q1	113 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	YHR214C-E	Q8TGK0	99 aa		4.09	□□□□□ -1.75
ATM1	YMR301C	YOL162W	P0CF19	215 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	PET122	P10355	254 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	GIT1	P25346	518 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	PRE2	P30656	287 aa	Known RBP	4.09	□□□□□ -1.76
ATM1	YMR301C	MTC7	P32633	139 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	ALP1	P38971	573 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	FET3	P38993	636 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	GDI1	P39958	451 aa	Known RBP	4.09	□□□□□ -1.76
ATM1	YMR301C	YDR102C	Q03864	110 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	PEX12	Q04370	399 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	SEC13	Q04491	297 aa	Known RBP	4.09	□□□□□ -1.76
ATM1	YMR301C	ULA1	Q12059	462 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	LYS21	Q12122	440 aa	Known RBP	4.09	□□□□□ -1.76
ATM1	YMR301C	RNH203	Q12338	110 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	RTN2	Q12443	393 aa		4.09	□□□□□ -1.76
ATM1	YMR301C	POM34	Q12445	299 aa		4.09	□□□□□ -1.76

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