RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	MAL13	P53338	473 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	MAL12	P53341	584 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	SSU72	P53538	206 aa	Predicted RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	OSH6	Q02201	448 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	CGI121	Q03705	181 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	SEC13	Q04491	297 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	INM2	Q05533	292 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	ECM19	Q06011	112 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	YPR078C	Q06813	372 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	YDL144C	Q07589	356 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	YOR012W	Q12351	137 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	YHR086W-A	Q3E746	53 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	SPO24	Q3E752	67 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	TDH2	P00358	332 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	HIS3	P06633	220 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	TAL1	P15019	335 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	FAR1	P21268	830 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MDH2	P22133	377 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	PRE7	P23724	241 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	DPB2	P24482	689 aa	Predicted RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	FAA1	P30624	700 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	SMI1	P32566	505 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	RPS0A	P32905	252 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	YKR045C	P36138	183 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	DRE2	P36152	348 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	RXT2	P38255	430 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YDR089W	P38966	869 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SOP4	P39543	234 aa	Predicted RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	PCL7	P40186	285 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MRPL49	P40858	161 aa	Predicted RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	PRM10	P42946	383 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	LOH1	P47055	219 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YJL016W	P47072	561 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	JHD2	P47156	728 aa	Predicted RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	UFD1	P53044	361 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	TPN1	P53099	579 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	CUE3	P53137	624 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	DAD3	P69850	94 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MZM1	Q03429	123 aa	Predicted RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	YMR007W	Q03675	126 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	GTO3	Q04806	366 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	PEX10	Q05568	337 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YLR446W	Q06204	433 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	PBP4	Q07362	185 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	YLR012C	Q07927	99 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YOR292C	Q08743	309 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SLM3	Q12093	417 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	PER33	Q12144	273 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	POM33	Q12164	279 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	RPN6	Q12377	434 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SAS5	Q99314	248 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	UBR2	Q07963	1872 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	RAD1	P06777	1100 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	STE3	P06783	470 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SGA1	P08019	549 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	ZWF1	P11412	505 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	RPB9	P27999	122 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SUA5	P32579	426 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SWI3	P32591	825 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YKL063C	P35725	167 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.18	□□□□□ -2.38	not detected
RCO1	YMR075W	ARN2	P38724	620 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	TEM1	P38987	245 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	SHC1	P39000	512 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MEP1	P40260	492 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	CIS3	P47001	227 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MRX5	P47007	382 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YGR026W	P53217	278 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	COS6	P53344	381 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MPP6	P53725	186 aa	Predicted RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	CTF19	Q02732	369 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YPL077C	Q02831	240 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YMR279C	Q03263	540 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YML018C	Q03730	393 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	DPP1	Q05521	289 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YLR297W	Q05899	129 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	BER1	Q06688	274 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	ASR1	Q06834	288 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	NOP6	Q07623	225 aa	Known RBP	0.18	□□□□□ -2.38
RCO1	YMR075W	SIA1	Q12212	622 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YDR262W	Q12331	272 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YAL063C-A	Q3E791	96 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	YIL002W-A	Q3E7Z5	69 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	MET5	P47169	1442 aa		0.18	□□□□□ -2.38
RCO1	YMR075W	STF1	P01098	86 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	RPL9A	P05738	191 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	CDC37	P06101	506 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	RAD10	P06838	210 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	RPL18A	P0CX49	186 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	RPL18B	P0CX50	186 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	RPS16A	P0CX51	143 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	RPS16B	P0CX52	143 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	RPL5	P26321	297 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	COT1	P32798	439 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	VMA11	P32842	164 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YOR062C	P36025	268 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	UIP5	P36137	443 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YHR122W	P38829	231 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	DSE2	P38844	325 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	MNN9	P39107	395 aa	Known RBP	0.17	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms