RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C HPR1P17629 752 aaKnown RBP2.57□□□□□ -2
YMR046CYMR046C MEK1P24719 497 aaPredicted RBP2.57□□□□□ -2
YMR046CYMR046C ECT1P33412 323 aa2.57□□□□□ -2
YMR046CYMR046C YKL070WP36087 169 aa2.57□□□□□ -2
YMR046CYMR046C OPY1P38271 328 aa2.57□□□□□ -2
YMR046CYMR046C YMR262WP38430 313 aa2.57□□□□□ -2
YMR046CYMR046C EFM1P38732 585 aa2.57□□□□□ -2
YMR046CYMR046C YGL185CP53100 379 aa2.57□□□□□ -2
YMR046CYMR046C RMI1Q02685 241 aa2.57□□□□□ -2
YMR046CYMR046C PBP4Q07362 185 aaKnown RBP2.57□□□□□ -2
YMR046CYMR046C SRO7Q12038 1033 aa2.57□□□□□ -2
YMR046CYMR046C APC9Q12107 265 aa2.57□□□□□ -2
YMR046CYMR046C ASP3-2P0CX77 362 aa2.56□□□□□ -2
YMR046CYMR046C ASP3-3P0CX78 362 aa2.56□□□□□ -2
YMR046CYMR046C ASP3-4P0CX79 362 aa2.56□□□□□ -2
YMR046CYMR046C ASP3-1P0CZ17 362 aa2.56□□□□□ -2
YMR046CYMR046C BGL2P15703 313 aaKnown RBP2.56□□□□□ -2
YMR046CYMR046C GPI12P23797 304 aa2.56□□□□□ -2
YMR046CYMR046C CBF5P33322 483 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
YMR046CYMR046C SWD2P36104 329 aaPredicted RBP2.56□□□□□ -2
YMR046CYMR046C MRPS9P38120 278 aa2.56□□□□□ -2
YMR046CYMR046C RCK1P38622 512 aa2.56□□□□□ -2
YMR046CYMR046C VAB2P40003 282 aa2.56□□□□□ -2
YMR046CYMR046C MND1P53102 219 aa2.56□□□□□ -2
YMR046CYMR046C RPN14P53196 417 aa2.56□□□□□ -2
YMR046CYMR046C TPC1P53257 314 aa2.56□□□□□ -2
YMR046CYMR046C LSB1P53281 241 aa2.56□□□□□ -2
YMR046CYMR046C YGR266WP53326 701 aa2.56□□□□□ -2
YMR046CYMR046C MRX11Q03079 207 aa2.56□□□□□ -2
YMR046CYMR046C SNX41Q04053 625 aa2.56□□□□□ -2
YMR046CYMR046C YPQ1Q12010 308 aa2.56□□□□□ -2
YMR046CYMR046C IZH4Q99393 312 aa2.56□□□□□ -2
YMR046CYMR046C SSA3P09435 649 aaKnown RBP2.55□□□□□ -2
YMR046CYMR046C SPS100P13130 326 aa2.55□□□□□ -2
YMR046CYMR046C MCH2P36032 473 aa2.55□□□□□ -2
YMR046CYMR046C CTM1P38818 585 aa2.55□□□□□ -2
YMR046CYMR046C SOP4P39543 234 aaPredicted RBP2.55□□□□□ -2
YMR046CYMR046C KEL2P50090 882 aa2.55□□□□□ -2
YMR046CYMR046C VEL1P53058 206 aa2.55□□□□□ -2
YMR046CYMR046C SWC4P53201 476 aa2.55□□□□□ -2
YMR046CYMR046C NRM1P53718 249 aa2.55□□□□□ -2
YMR046CYMR046C MMT2Q08970 484 aa2.55□□□□□ -2
YMR046CYMR046C UTP23Q12339 254 aaKnown RBP2.55□□□□□ -2
YMR046CYMR046C YDL012CQ12489 107 aa2.55□□□□□ -2
YMR046CYMR046C STE2D6VTK4 431 aa2.54□□□□□ -2
YMR046CYMR046C ATP6P00854 259 aa2.54□□□□□ -2
YMR046CYMR046C RPL31AP0C2H8 113 aaKnown RBP2.54□□□□□ -2
YMR046CYMR046C ERD1P16151 362 aa2.54□□□□□ -2
YMR046CYMR046C EPT1P22140 391 aa2.54□□□□□ -2
YMR046CYMR046C CSM1P25651 190 aa2.54□□□□□ -2
YMR046CYMR046C SPS19P32573 292 aaKnown RBP2.54□□□□□ -2
YMR046CYMR046C TIP20P33891 701 aa2.54□□□□□ -2
YMR046CYMR046C YKL187CP34231 750 aa2.54□□□□□ -2
YMR046CYMR046C SMP1P38128 452 aa2.54□□□□□ -2
YMR046CYMR046C HIS2P38635 335 aa2.54□□□□□ -2
YMR046CYMR046C GGC1P38988 300 aa2.54□□□□□ -2
YMR046CYMR046C RSM25P40496 264 aa2.54□□□□□ -2
YMR046CYMR046C RTC4P53850 401 aa2.54□□□□□ -2
YMR046CYMR046C SED5Q01590 340 aa2.54□□□□□ -2
YMR046CYMR046C YPL077CQ02831 240 aa2.54□□□□□ -2
YMR046CYMR046C ECM11Q04110 302 aa2.54□□□□□ -2
YMR046CYMR046C BER1Q06688 274 aaKnown RBP2.54□□□□□ -2
YMR046CYMR046C YPL245WQ12179 454 aaKnown RBP2.54□□□□□ -2
YMR046CYMR046C FMP16Q12497 93 aa2.54□□□□□ -2
YMR046CYMR046C TPI1P00942 248 aaKnown RBP2.53□□□□□ -2
YMR046CYMR046C MATALPHA2P0CY08 210 aa2.53□□□□□ -2
YMR046CYMR046C HMLALPHA2P0CY09 210 aa2.53□□□□□ -2
YMR046CYMR046C FRS2P15625 503 aaKnown RBP2.53□□□□□ -2
YMR046CYMR046C COQ1P18900 473 aa2.53□□□□□ -2
YMR046CYMR046C MAK31P23059 88 aa2.53□□□□□ -2
YMR046CYMR046C BMH2P34730 273 aaKnown RBP2.53□□□□□ -2
YMR046CYMR046C PET100P38958 111 aa2.53□□□□□ -2
YMR046CYMR046C SLM1P40485 686 aa2.53□□□□□ -2
YMR046CYMR046C GDS1P41913 522 aa2.53□□□□□ -2
YMR046CYMR046C AGP3P43548 558 aa2.53□□□□□ -2
YMR046CYMR046C UBC13P52490 153 aa2.53□□□□□ -2
YMR046CYMR046C SDS23P53172 527 aa2.53□□□□□ -2
YMR046CYMR046C YDR018CQ12185 396 aa2.53□□□□□ -2
YMR046CYMR046C YBL111CQ3E7Y5 667 aa2.53□□□□□ -2
YMR046CYMR046C PMD1P32634 1753 aa2.53□□□□□ -2
YMR046CYMR046C RPL16BP26785 198 aaKnown RBP2.52□□□□□ -2.01
YMR046CYMR046C PRX1P34227 261 aaKnown RBP2.52□□□□□ -2.01
YMR046CYMR046C RPC37P36121 282 aa2.52□□□□□ -2.01
YMR046CYMR046C TAE1P38340 232 aa2.52□□□□□ -2.01
YMR046CYMR046C PET8P38921 284 aa2.52□□□□□ -2.01
YMR046CYMR046C YFL012WP43580 148 aa2.52□□□□□ -2.01
YMR046CYMR046C EMC2P47133 292 aaKnown RBP2.52□□□□□ -2.01
YMR046CYMR046C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
YMR046CYMR046C API2Q04413 109 aa2.52□□□□□ -2.01
YMR046CYMR046C YLR446WQ06204 433 aa2.52□□□□□ -2.01
YMR046CYMR046C GPN3Q06543 272 aa2.52□□□□□ -2.01
YMR046CYMR046C MIM1Q08176 113 aa2.52□□□□□ -2.01
YMR046CYMR046C TY3A-GQ12173 290 aa2.52□□□□□ -2.01
YMR046CYMR046C TIR4Q12218 487 aaPredicted RBP2.52□□□□□ -2.01
YMR046CYMR046C ERP3Q12403 225 aa2.52□□□□□ -2.01
YMR046CYMR046C PRP46Q12417 451 aaPredicted RBP2.52□□□□□ -2.01
YMR046CYMR046C TY3A-IQ99219 290 aa2.52□□□□□ -2.01
YMR046CYMR046C FAS2P19097 1887 aaKnown RBP2.52□□□□□ -2.01
YMR046CYMR046C FIG2P25653 1609 aa2.51□□□□□ -2.01
YMR046CYMR046C TDH3P00359 332 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms