RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C CPD1P53314 239 aa2.59□□□□□ -1.99
SUB1YMR039C RNH201P53942 307 aa2.59□□□□□ -1.99
SUB1YMR039C INP2Q03824 705 aa2.59□□□□□ -1.99
SUB1YMR039C VBA1Q04301 562 aa2.59□□□□□ -1.99
SUB1YMR039C FAR10Q06001 478 aa2.59□□□□□ -1.99
SUB1YMR039C SRO7Q12038 1033 aa2.59□□□□□ -1.99
SUB1YMR039C ATP16Q12165 160 aa2.59□□□□□ -1.99
SUB1YMR039C YOS9Q99220 542 aa2.59□□□□□ -1.99
SUB1YMR039C YOL085CQ99345 113 aa2.59□□□□□ -1.99
SUB1YMR039C CFT1Q06632 1357 aaKnown RBP2.59□□□□□ -2
SUB1YMR039C SAL1D6W196 494 aa2.58□□□□□ -2
SUB1YMR039C INO2P26798 304 aa2.58□□□□□ -2
SUB1YMR039C CBF5P33322 483 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SUB1YMR039C AIM29P36154 155 aa2.58□□□□□ -2
SUB1YMR039C BIG1P38813 335 aa2.58□□□□□ -2
SUB1YMR039C SHC1P39000 512 aa2.58□□□□□ -2
SUB1YMR039C COQ5P49017 307 aa2.58□□□□□ -2
SUB1YMR039C SLT2Q00772 484 aa2.58□□□□□ -2
SUB1YMR039C TAF10Q12030 206 aa2.58□□□□□ -2
SUB1YMR039C YPL245WQ12179 454 aaKnown RBP2.58□□□□□ -2
SUB1YMR039C TFC7Q12415 435 aa2.58□□□□□ -2
SUB1YMR039C TDH2P00358 332 aaKnown RBP2.57□□□□□ -2
SUB1YMR039C TFS1P14306 219 aa2.57□□□□□ -2
SUB1YMR039C EPT1P22140 391 aa2.57□□□□□ -2
SUB1YMR039C MRPL6P32904 214 aa2.57□□□□□ -2
SUB1YMR039C SMP1P38128 452 aa2.57□□□□□ -2
SUB1YMR039C MRX3P38172 270 aa2.57□□□□□ -2
SUB1YMR039C SHE3P38272 425 aaKnown RBP2.57□□□□□ -2
SUB1YMR039C YPC1P38298 316 aa2.57□□□□□ -2
SUB1YMR039C PRS2P38620 318 aaKnown RBP2.57□□□□□ -2
SUB1YMR039C ECM34P38728 170 aa2.57□□□□□ -2
SUB1YMR039C EFM1P38732 585 aa2.57□□□□□ -2
SUB1YMR039C RAD17P48581 401 aa2.57□□□□□ -2
SUB1YMR039C YPT32P51996 222 aaKnown RBP2.57□□□□□ -2
SUB1YMR039C TRM44Q02648 567 aaKnown RBP2.57□□□□□ -2
SUB1YMR039C OST6Q03723 332 aa2.57□□□□□ -2
SUB1YMR039C GTO3Q04806 366 aa2.57□□□□□ -2
SUB1YMR039C YLR446WQ06204 433 aa2.57□□□□□ -2
SUB1YMR039C CLP1Q08685 445 aaPredicted RBP2.57□□□□□ -2
SUB1YMR039C CSM4Q08955 156 aa2.57□□□□□ -2
SUB1YMR039C MSH5Q12175 901 aa2.57□□□□□ -2
SUB1YMR039C YOR029WQ12243 111 aa2.57□□□□□ -2
SUB1YMR039C LAG2Q92325 660 aa2.57□□□□□ -2
SUB1YMR039C JIP3O13555 125 aa2.56□□□□□ -2
SUB1YMR039C SPS100P13130 326 aa2.56□□□□□ -2
SUB1YMR039C RPL24BP24000 155 aaKnown RBP2.56□□□□□ -2
SUB1YMR039C RNA15P25299 296 aaPredicted RBP2.56□□□□□ -2
SUB1YMR039C PMT2P31382 759 aa2.56□□□□□ -2
SUB1YMR039C PRY2P36110 329 aa2.56□□□□□ -2
SUB1YMR039C RCK1P38622 512 aa2.56□□□□□ -2
SUB1YMR039C STB1P42845 420 aa2.56□□□□□ -2
SUB1YMR039C ASG7P46993 209 aa2.56□□□□□ -2
SUB1YMR039C YPR195CQ06594 109 aa2.56□□□□□ -2
SUB1YMR039C YOR376WQ08900 122 aa2.56□□□□□ -2
SUB1YMR039C PER33Q12144 273 aa2.56□□□□□ -2
SUB1YMR039C MHP1P43638 1398 aa2.56□□□□□ -2
SUB1YMR039C MER1P16523 270 aa2.55□□□□□ -2
SUB1YMR039C MRPL25P23369 157 aa2.55□□□□□ -2
SUB1YMR039C RPS5P26783 225 aaKnown RBP2.55□□□□□ -2
SUB1YMR039C PPA2P28239 310 aa2.55□□□□□ -2
SUB1YMR039C SPT4P32914 102 aaPredicted RBP2.55□□□□□ -2
SUB1YMR039C YKL187CP34231 750 aa2.55□□□□□ -2
SUB1YMR039C SIP3P38717 1229 aa2.55□□□□□ -2
SUB1YMR039C RPL10P41805 221 aaKnown RBP2.55□□□□□ -2
SUB1YMR039C YRB1P41920 201 aaKnown RBP2.55□□□□□ -2
SUB1YMR039C CDH1P53197 566 aa2.55□□□□□ -2
SUB1YMR039C HST4P53688 370 aa2.55□□□□□ -2
SUB1YMR039C YDR209CQ03480 137 aa2.55□□□□□ -2
SUB1YMR039C GMC1Q04399 608 aa2.55□□□□□ -2
SUB1YMR039C MYO5Q04439 1219 aaKnown RBP2.55□□□□□ -2
SUB1YMR039C ATG38Q05789 226 aaKnown RBP2.55□□□□□ -2
SUB1YMR039C SFH1Q06168 426 aa2.55□□□□□ -2
SUB1YMR039C CTR3Q06686 241 aa2.55□□□□□ -2
SUB1YMR039C VIK1Q12045 647 aa2.55□□□□□ -2
SUB1YMR039C SME1Q12330 94 aaPredicted RBP2.55□□□□□ -2
SUB1YMR039C NCB2Q92317 146 aa2.55□□□□□ -2
SUB1YMR039C MRPL20P22354 195 aaPredicted RBP2.54□□□□□ -2
SUB1YMR039C POF1P25576 258 aa2.54□□□□□ -2
SUB1YMR039C PEX3P28795 441 aa2.54□□□□□ -2
SUB1YMR039C CAB3P36076 571 aa2.54□□□□□ -2
SUB1YMR039C SHE1P38200 338 aa2.54□□□□□ -2
SUB1YMR039C LDB7P38210 180 aa2.54□□□□□ -2
SUB1YMR039C YJR054WP47114 497 aa2.54□□□□□ -2
SUB1YMR039C IBA57P47158 497 aa2.54□□□□□ -2
SUB1YMR039C YGR015CP53208 328 aa2.54□□□□□ -2
SUB1YMR039C NRM1P53718 249 aa2.54□□□□□ -2
SUB1YMR039C NOP13P53883 403 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SUB1YMR039C GIM3P53900 129 aa2.54□□□□□ -2
SUB1YMR039C RMI1Q02685 241 aa2.54□□□□□ -2
SUB1YMR039C MRX11Q03079 207 aa2.54□□□□□ -2
SUB1YMR039C MRPS17Q03246 237 aaPredicted RBP2.54□□□□□ -2
SUB1YMR039C SCS7Q03529 384 aa2.54□□□□□ -2
SUB1YMR039C YML018CQ03730 393 aa2.54□□□□□ -2
SUB1YMR039C BNA7Q04066 261 aa2.54□□□□□ -2
SUB1YMR039C TAF9Q05027 157 aa2.54□□□□□ -2
SUB1YMR039C DPP1Q05521 289 aa2.54□□□□□ -2
SUB1YMR039C SPO77Q06134 477 aa2.54□□□□□ -2
SUB1YMR039C PEX30Q06169 523 aa2.54□□□□□ -2
SUB1YMR039C SEC10Q06245 871 aa2.54□□□□□ -2
SUB1YMR039C STH1P32597 1359 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms