RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C STE18P18852 110 aa9.24□□□□□ -0.93
SHM2YLR058C PTC6P25646 442 aa9.24□□□□□ -0.93
SHM2YLR058C AHC2P25649 128 aa9.24□□□□□ -0.93
SHM2YLR058C SRP102P36057 244 aaPredicted RBP9.24□□□□□ -0.93
SHM2YLR058C PTI1P39927 425 aaPredicted RBP9.24□□□□□ -0.93
SHM2YLR058C RPN14P53196 417 aa9.24□□□□□ -0.93
SHM2YLR058C SRP1Q02821 542 aaKnown RBP9.24□□□□□ -0.93
SHM2YLR058C HRI1Q05905 244 aaKnown RBP9.24□□□□□ -0.93
SHM2YLR058C YLR352WQ06479 807 aa9.24□□□□□ -0.93
SHM2YLR058C YDL218WQ07629 317 aa9.24□□□□□ -0.93
SHM2YLR058C DCP1Q12517 231 aaPredicted RBP9.24□□□□□ -0.93
SHM2YLR058C SPO7P18410 259 aa9.23□□□□□ -0.93
SHM2YLR058C RPC34P32910 317 aa9.23□□□□□ -0.93
SHM2YLR058C VPS17P32913 551 aa9.23□□□□□ -0.93
SHM2YLR058C ADO1P47143 340 aaKnown RBP9.23□□□□□ -0.93
SHM2YLR058C IMO32P53219 342 aa9.23□□□□□ -0.93
SHM2YLR058C SOK2P53438 785 aaPredicted RBP9.23□□□□□ -0.93
SHM2YLR058C YNR040WP53736 256 aa9.23□□□□□ -0.93
SHM2YLR058C ASI3P53983 676 aa9.23□□□□□ -0.93
SHM2YLR058C PET191Q02772 108 aa9.23□□□□□ -0.93
SHM2YLR058C MRX8Q05473 314 aa9.23□□□□□ -0.93
SHM2YLR058C BRE4Q07660 1125 aa9.23□□□□□ -0.93
SHM2YLR058C SYC1Q08553 188 aaPredicted RBP9.23□□□□□ -0.93
SHM2YLR058C YPL272CQ08984 517 aa9.23□□□□□ -0.93
SHM2YLR058C BAG7Q12128 409 aa9.23□□□□□ -0.93
SHM2YLR058C YLR099W-AQ3E798 87 aa9.23□□□□□ -0.93
SHM2YLR058C IPP1P00817 287 aaKnown RBP9.22□□□□□ -0.93
SHM2YLR058C MSW1P04803 379 aa9.22□□□□□ -0.93
SHM2YLR058C MRP1P10662 321 aaKnown RBP9.22□□□□□ -0.93
SHM2YLR058C DOA4P32571 926 aa9.22□□□□□ -0.93
SHM2YLR058C PEX32P38292 413 aa9.22□□□□□ -0.93
SHM2YLR058C CCC1P47818 322 aa9.22□□□□□ -0.93
SHM2YLR058C HSV2P50079 448 aaPredicted RBP9.22□□□□□ -0.93
SHM2YLR058C NNT1Q05874 261 aa9.22□□□□□ -0.93
SHM2YLR058C COQ11Q05892 277 aa9.22□□□□□ -0.93
SHM2YLR058C MCH4Q08268 501 aa9.22□□□□□ -0.93
SHM2YLR058C MED2Q12124 431 aa9.22□□□□□ -0.93
SHM2YLR058C MEC1P38111 2368 aa9.22□□□□□ -0.93
SHM2YLR058C COX9P07255 59 aa9.22□□□□□ -0.93
SHM2YLR058C KRR1P25586 316 aaPredicted RBP9.22□□□□□ -0.93
SHM2YLR058C PMT5P52867 743 aa9.22□□□□□ -0.93
SHM2YLR058C PLB2Q03674 706 aa9.22□□□□□ -0.93
SHM2YLR058C AIM36Q03798 255 aa9.22□□□□□ -0.93
SHM2YLR058C YDR514CQ04408 483 aa9.22□□□□□ -0.93
SHM2YLR058C CDC31P06704 161 aaKnown RBP9.21□□□□□ -0.94
SHM2YLR058C MEK1P24719 497 aaPredicted RBP9.21□□□□□ -0.94
SHM2YLR058C PTH1P38876 190 aaKnown RBP9.21□□□□□ -0.94
SHM2YLR058C RMD9P53140 646 aaKnown RBP9.21□□□□□ -0.94
SHM2YLR058C PCP1P53259 346 aa9.21□□□□□ -0.94
SHM2YLR058C MRP51Q02950 344 aa9.21□□□□□ -0.94
SHM2YLR058C YMR265CQ03508 461 aaKnown RBP9.21□□□□□ -0.94
SHM2YLR058C SSY1Q03770 852 aa9.21□□□□□ -0.94
SHM2YLR058C MSS11Q03825 758 aa9.21□□□□□ -0.94
SHM2YLR058C GPI17Q04080 534 aa9.21□□□□□ -0.94
SHM2YLR058C GPN3Q06543 272 aa9.21□□□□□ -0.94
SHM2YLR058C TSR2Q06672 205 aaKnown RBP9.21□□□□□ -0.94
SHM2YLR058C SOG2Q08817 791 aa9.21□□□□□ -0.94
SHM2YLR058C MSH5Q12175 901 aa9.21□□□□□ -0.94
SHM2YLR058C RPN13O13563 156 aa9.2□□□□□ -0.94
SHM2YLR058C PHO2P07269 559 aa9.2□□□□□ -0.94
SHM2YLR058C ZRT3P34240 503 aa9.2□□□□□ -0.94
SHM2YLR058C MTH1P35198 433 aa9.2□□□□□ -0.94
SHM2YLR058C SPT10P35208 640 aa9.2□□□□□ -0.94
SHM2YLR058C ANR2P36090 516 aaPredicted RBP9.2□□□□□ -0.94
SHM2YLR058C MRPL39P36533 70 aa9.2□□□□□ -0.94
SHM2YLR058C MTC6P38849 526 aa9.2□□□□□ -0.94
SHM2YLR058C SLS1P42900 643 aa9.2□□□□□ -0.94
SHM2YLR058C DPB11P47027 764 aaPredicted RBP9.2□□□□□ -0.94
SHM2YLR058C RVB1Q03940 463 aaKnown RBP9.2□□□□□ -0.94
SHM2YLR058C NGL1Q08213 363 aaKnown RBP9.2□□□□□ -0.94
SHM2YLR058C PEX27Q08580 376 aa9.2□□□□□ -0.94
SHM2YLR058C TIR4Q12218 487 aaPredicted RBP9.2□□□□□ -0.94
SHM2YLR058C YDL180WQ12301 547 aa9.2□□□□□ -0.94
SHM2YLR058C DBF2P22204 572 aa9.19□□□□□ -0.94
SHM2YLR058C SLZ1P40167 298 aa9.19□□□□□ -0.94
SHM2YLR058C NMA1Q06178 401 aaKnown RBP9.19□□□□□ -0.94
SHM2YLR058C RTC5Q12108 567 aaKnown RBP9.19□□□□□ -0.94
SHM2YLR058C QCR7P00128 127 aa9.18□□□□□ -0.94
SHM2YLR058C ERG4P25340 473 aa9.18□□□□□ -0.94
SHM2YLR058C PAU2P32612 120 aa9.18□□□□□ -0.94
SHM2YLR058C CCZ1P38273 704 aa9.18□□□□□ -0.94
SHM2YLR058C YBR137WP38276 179 aa9.18□□□□□ -0.94
SHM2YLR058C SDS24P38314 527 aa9.18□□□□□ -0.94
SHM2YLR058C TIR3P40552 269 aa9.18□□□□□ -0.94
SHM2YLR058C YJR120WP47157 116 aa9.18□□□□□ -0.94
SHM2YLR058C LYS20P48570 428 aaKnown RBP9.18□□□□□ -0.94
SHM2YLR058C RAI1P53063 387 aaKnown RBP9.18□□□□□ -0.94
SHM2YLR058C YGL204CP53089 101 aa9.18□□□□□ -0.94
SHM2YLR058C MRPL19P53875 158 aa9.18□□□□□ -0.94
SHM2YLR058C LUC7Q07508 261 aaPredicted RBP9.18□□□□□ -0.94
SHM2YLR058C LYS21Q12122 440 aaKnown RBP9.18□□□□□ -0.94
SHM2YLR058C SUS1Q6WNK7 96 aa9.18□□□□□ -0.94
SHM2YLR058C TRA1P38811 3744 aa9.18□□□□□ -0.94
SHM2YLR058C SOD2P00447 233 aa9.17□□□□□ -0.94
SHM2YLR058C GCN4P03069 281 aa9.17□□□□□ -0.94
SHM2YLR058C SCEIP03882 235 aa9.17□□□□□ -0.94
SHM2YLR058C RPS16AP0CX51 143 aaKnown RBP9.17□□□□□ -0.94
SHM2YLR058C RPS16BP0CX52 143 aaKnown RBP9.17□□□□□ -0.94
SHM2YLR058C SED4P25365 1065 aa9.17□□□□□ -0.94
SHM2YLR058C SHE2P36068 246 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms