RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C UBC12P52491 188 aa5.04□□□□□ -1.6
VPS1YKR001C CWC23P52868 283 aaPredicted RBP5.04□□□□□ -1.6
VPS1YKR001C COS10P52924 374 aa5.04□□□□□ -1.6
VPS1YKR001C BUD32P53323 261 aa5.04□□□□□ -1.6
VPS1YKR001C NUP49Q02199 472 aa5.04□□□□□ -1.6
VPS1YKR001C YPL199CQ08954 240 aa5.04□□□□□ -1.6
VPS1YKR001C FCF2Q12035 217 aaPredicted RBP5.04□□□□□ -1.6
VPS1YKR001C MAG1P22134 296 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C SAT4P25333 603 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C ILV6P25605 309 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C YCR015CP25616 317 aa5.03□□□□□ -1.6
VPS1YKR001C EHD3P28817 500 aa5.03□□□□□ -1.6
VPS1YKR001C SUA7P29055 345 aaPredicted RBP5.03□□□□□ -1.6
VPS1YKR001C MCM5P29496 775 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C ADD66P36040 267 aa5.03□□□□□ -1.6
VPS1YKR001C YPC1P38298 316 aa5.03□□□□□ -1.6
VPS1YKR001C YBR197CP38306 217 aa5.03□□□□□ -1.6
VPS1YKR001C LAS21P40367 830 aa5.03□□□□□ -1.6
VPS1YKR001C SPG5P42933 373 aa5.03□□□□□ -1.6
VPS1YKR001C YGL114WP53134 725 aa5.03□□□□□ -1.6
VPS1YKR001C RMD9P53140 646 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C TRM112P53738 135 aaPredicted RBP5.03□□□□□ -1.6
VPS1YKR001C SHR3Q02774 210 aa5.03□□□□□ -1.6
VPS1YKR001C CCE1Q03702 353 aa5.03□□□□□ -1.6
VPS1YKR001C SHH3Q04487 196 aa5.03□□□□□ -1.6
VPS1YKR001C CDC73Q06697 393 aa5.03□□□□□ -1.6
VPS1YKR001C YOR387CQ08910 206 aa5.03□□□□□ -1.6
VPS1YKR001C TY1A-BLQ12266 440 aa5.03□□□□□ -1.6
VPS1YKR001C SEC53P07283 254 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C YCR023CP25351 611 aa5.03□□□□□ -1.6
VPS1YKR001C ADH7P25377 361 aa5.03□□□□□ -1.6
VPS1YKR001C PTC6P25646 442 aa5.03□□□□□ -1.6
VPS1YKR001C SBA1P28707 216 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C SGE1P33335 543 aa5.03□□□□□ -1.6
VPS1YKR001C SNN1P48232 102 aa5.03□□□□□ -1.6
VPS1YKR001C ARO8P53090 500 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C YNL260CP53846 198 aa5.03□□□□□ -1.6
VPS1YKR001C INN1P53901 409 aa5.03□□□□□ -1.6
VPS1YKR001C SPP2Q02521 185 aa5.03□□□□□ -1.6
VPS1YKR001C DIG1Q03063 452 aaKnown RBP5.03□□□□□ -1.6
VPS1YKR001C SIZ1Q04195 904 aa5.03□□□□□ -1.6
VPS1YKR001C DCI1Q08558 271 aa5.03□□□□□ -1.6
VPS1YKR001C RKM5Q12367 367 aa5.03□□□□□ -1.6
VPS1YKR001C POL2P21951 2222 aaKnown RBP5.02□□□□□ -1.61
VPS1YKR001C YER152CP10356 443 aa5.02□□□□□ -1.61
VPS1YKR001C ATP10P18496 279 aa5.02□□□□□ -1.61
VPS1YKR001C YCK1P23291 538 aa5.02□□□□□ -1.61
VPS1YKR001C PCL2P25693 308 aa5.02□□□□□ -1.61
VPS1YKR001C YHR127WP38833 243 aaKnown RBP5.02□□□□□ -1.61
VPS1YKR001C VPS52P39904 641 aa5.02□□□□□ -1.61
VPS1YKR001C SLZ1P40167 298 aa5.02□□□□□ -1.61
VPS1YKR001C CDC1P40986 491 aa5.02□□□□□ -1.61
VPS1YKR001C NSE4P43124 402 aa5.02□□□□□ -1.61
VPS1YKR001C YFL054CP43549 646 aa5.02□□□□□ -1.61
VPS1YKR001C BIT61P47041 543 aa5.02□□□□□ -1.61
VPS1YKR001C IKS1P47042 667 aa5.02□□□□□ -1.61
VPS1YKR001C AVT4P50944 713 aa5.02□□□□□ -1.61
VPS1YKR001C SOK2P53438 785 aaPredicted RBP5.02□□□□□ -1.61
VPS1YKR001C TY1A-MR1Q04215 440 aa5.02□□□□□ -1.61
VPS1YKR001C FRA1Q07825 749 aa5.02□□□□□ -1.61
VPS1YKR001C MED7Q08278 222 aa5.02□□□□□ -1.61
VPS1YKR001C THI21Q08975 551 aa5.02□□□□□ -1.61
VPS1YKR001C RGT2Q12300 763 aa5.02□□□□□ -1.61
VPS1YKR001C SFG1Q12507 346 aa5.02□□□□□ -1.61
VPS1YKR001C COR1P07256 457 aa5.02□□□□□ -1.61
VPS1YKR001C LRE1P25579 583 aaKnown RBP5.02□□□□□ -1.61
VPS1YKR001C SSS1P35179 80 aa5.02□□□□□ -1.61
VPS1YKR001C MIC12P38341 106 aa5.02□□□□□ -1.61
VPS1YKR001C YHR078WP38799 552 aa5.02□□□□□ -1.61
VPS1YKR001C SOL3P38858 249 aa5.02□□□□□ -1.61
VPS1YKR001C YEL057CP39983 233 aa5.02□□□□□ -1.61
VPS1YKR001C DIM1P41819 318 aaKnown RBP5.02□□□□□ -1.61
VPS1YKR001C AIM23P47015 356 aa5.02□□□□□ -1.61
VPS1YKR001C TRM9P49957 279 aa5.02□□□□□ -1.61
VPS1YKR001C VEL1P53058 206 aa5.02□□□□□ -1.61
VPS1YKR001C OSH6Q02201 448 aa5.02□□□□□ -1.61
VPS1YKR001C YMR160WQ03823 816 aa5.02□□□□□ -1.61
VPS1YKR001C CTK1Q03957 528 aaKnown RBP5.02□□□□□ -1.61
VPS1YKR001C APC4Q04601 652 aa5.02□□□□□ -1.61
VPS1YKR001C YET3Q07451 203 aa5.02□□□□□ -1.61
VPS1YKR001C AAD4Q07747 329 aa5.02□□□□□ -1.61
VPS1YKR001C LCB4Q12246 624 aa5.02□□□□□ -1.61
VPS1YKR001C FOL3Q12676 427 aaPredicted RBP5.02□□□□□ -1.61
VPS1YKR001C RPS4AP0CX35 261 aaKnown RBP5.01□□□□□ -1.61
VPS1YKR001C RPS4BP0CX36 261 aaKnown RBP5.01□□□□□ -1.61
VPS1YKR001C SPO12P17123 173 aa5.01□□□□□ -1.61
VPS1YKR001C YSR3P23501 404 aa5.01□□□□□ -1.61
VPS1YKR001C WBP1P33767 430 aaKnown RBP5.01□□□□□ -1.61
VPS1YKR001C YKL075CP36083 450 aa5.01□□□□□ -1.61
VPS1YKR001C FLO10P36170 1169 aa5.01□□□□□ -1.61
VPS1YKR001C MRPL24P36525 258 aaPredicted RBP5.01□□□□□ -1.61
VPS1YKR001C RRG9P40156 214 aa5.01□□□□□ -1.61
VPS1YKR001C YNL194CP40169 301 aa5.01□□□□□ -1.61
VPS1YKR001C GLC8P41818 229 aa5.01□□□□□ -1.61
VPS1YKR001C CAK1P43568 368 aaPredicted RBP5.01□□□□□ -1.61
VPS1YKR001C TAH11P47112 604 aa5.01□□□□□ -1.61
VPS1YKR001C ASN2P49090 572 aaKnown RBP5.01□□□□□ -1.61
VPS1YKR001C RIB4P50861 169 aaPredicted RBP5.01□□□□□ -1.61
VPS1YKR001C UBC7Q02159 165 aa5.01□□□□□ -1.61
VPS1YKR001C PIR3Q03180 325 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms