RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YPQ1Q12010 308 aa1.73□□□□□ -2.13
VPS35YJL154C GIS3Q12418 502 aa1.73□□□□□ -2.13
VPS35YJL154C PET494P07390 489 aaPredicted RBP1.72□□□□□ -2.13
VPS35YJL154C MSS116P15424 664 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C BGL2P15703 313 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C ERD1P16151 362 aa1.72□□□□□ -2.13
VPS35YJL154C SEN2P16658 377 aa1.72□□□□□ -2.13
VPS35YJL154C CDC42P19073 191 aa1.72□□□□□ -2.13
VPS35YJL154C CHA1P25379 360 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C ZRT1P32804 376 aa1.72□□□□□ -2.13
VPS35YJL154C LOH1P47055 219 aa1.72□□□□□ -2.13
VPS35YJL154C TIS11P47977 285 aa1.72□□□□□ -2.13
VPS35YJL154C MIG2P53035 382 aa1.72□□□□□ -2.13
VPS35YJL154C PGA2P53903 129 aa1.72□□□□□ -2.13
VPS35YJL154C VAC7P53950 1165 aa1.72□□□□□ -2.13
VPS35YJL154C VHS1Q03785 461 aa1.72□□□□□ -2.13
VPS35YJL154C RRP17Q04031 235 aaPredicted RBP1.72□□□□□ -2.13
VPS35YJL154C FUS2Q05670 677 aa1.72□□□□□ -2.13
VPS35YJL154C CUR1Q06469 252 aa1.72□□□□□ -2.13
VPS35YJL154C FRE8Q12209 686 aa1.72□□□□□ -2.13
VPS35YJL154C TFC7Q12415 435 aa1.72□□□□□ -2.13
VPS35YJL154C STE2D6VTK4 431 aa1.72□□□□□ -2.13
VPS35YJL154C NOP1P15646 327 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C HSP26P15992 214 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
VPS35YJL154C DAL81P21657 970 aa1.72□□□□□ -2.13
VPS35YJL154C ICL1P28240 557 aaPredicted RBP1.72□□□□□ -2.13
VPS35YJL154C MMS21P38632 267 aa1.72□□□□□ -2.13
VPS35YJL154C TDA11P38854 504 aa1.72□□□□□ -2.13
VPS35YJL154C YPS5P53057 165 aa1.72□□□□□ -2.13
VPS35YJL154C TIM21P53220 239 aa1.72□□□□□ -2.13
VPS35YJL154C MRX11Q03079 207 aa1.72□□□□□ -2.13
VPS35YJL154C DTD1Q07648 150 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C ABP140Q08641 628 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C RIO1Q12196 484 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C YPK2P18961 677 aa1.72□□□□□ -2.13
VPS35YJL154C SUA5P32579 426 aa1.72□□□□□ -2.13
VPS35YJL154C SPR1P32603 445 aa1.72□□□□□ -2.13
VPS35YJL154C ECM34P38728 170 aa1.72□□□□□ -2.13
VPS35YJL154C TCD1P38756 429 aa1.72□□□□□ -2.13
VPS35YJL154C YER085CP40058 173 aa1.72□□□□□ -2.13
VPS35YJL154C RTR1P40084 226 aaPredicted RBP1.72□□□□□ -2.13
VPS35YJL154C YRB1P41920 201 aaKnown RBP1.72□□□□□ -2.13
VPS35YJL154C EAF6P47128 113 aa1.72□□□□□ -2.13
VPS35YJL154C IRC4Q03036 179 aa1.72□□□□□ -2.13
VPS35YJL154C ATC1Q04005 294 aa1.72□□□□□ -2.13
VPS35YJL154C VIK1Q12045 647 aa1.72□□□□□ -2.13
VPS35YJL154C MRPL23Q12487 163 aaPredicted RBP1.72□□□□□ -2.13
VPS35YJL154C CMC2Q3E7A4 109 aa1.72□□□□□ -2.13
VPS35YJL154C YCR016WP25617 290 aaKnown RBP1.71□□□□□ -2.14
VPS35YJL154C PMT2P31382 759 aa1.71□□□□□ -2.14
VPS35YJL154C TPS2P31688 896 aaKnown RBP1.71□□□□□ -2.14
VPS35YJL154C MRPL37P36532 105 aa1.71□□□□□ -2.14
VPS35YJL154C MRPS9P38120 278 aa1.71□□□□□ -2.14
VPS35YJL154C FET3P38993 636 aa1.71□□□□□ -2.14
VPS35YJL154C PRM9P39551 298 aa1.71□□□□□ -2.14
VPS35YJL154C SCC4P40090 624 aa1.71□□□□□ -2.14
VPS35YJL154C YGR015CP53208 328 aa1.71□□□□□ -2.14
VPS35YJL154C RPL21AQ02753 160 aaKnown RBP1.71□□□□□ -2.14
VPS35YJL154C YPL080CQ02826 108 aa1.71□□□□□ -2.14
VPS35YJL154C ECM11Q04110 302 aa1.71□□□□□ -2.14
VPS35YJL154C GIM5Q04493 163 aa1.71□□□□□ -2.14
VPS35YJL154C ERV41Q04651 352 aa1.71□□□□□ -2.14
VPS35YJL154C STE23Q06010 1027 aa1.71□□□□□ -2.14
VPS35YJL154C YLR173WQ06247 608 aa1.71□□□□□ -2.14
VPS35YJL154C VAC14Q06708 880 aa1.71□□□□□ -2.14
VPS35YJL154C ALE1Q08548 619 aa1.71□□□□□ -2.14
VPS35YJL154C MMT2Q08970 484 aa1.71□□□□□ -2.14
VPS35YJL154C DCP1Q12517 231 aaPredicted RBP1.71□□□□□ -2.14
VPS35YJL154C YDR034W-BQ6Q5X2 51 aa1.71□□□□□ -2.14
VPS35YJL154C YIL177CP40434 1758 aa1.71□□□□□ -2.14
VPS35YJL154C YJL225CP40889 1758 aa1.71□□□□□ -2.14
VPS35YJL154C OSM1P21375 501 aaKnown RBP1.71□□□□□ -2.14
VPS35YJL154C APA2P22108 325 aa1.71□□□□□ -2.14
VPS35YJL154C YKL070WP36087 169 aa1.71□□□□□ -2.14
VPS35YJL154C TAE1P38340 232 aa1.71□□□□□ -2.14
VPS35YJL154C YER184CP39961 794 aa1.71□□□□□ -2.14
VPS35YJL154C HEM14P40012 539 aa1.71□□□□□ -2.14
VPS35YJL154C SHQ1P40486 507 aaPredicted RBP1.71□□□□□ -2.14
VPS35YJL154C OTU1P43558 301 aa1.71□□□□□ -2.14
VPS35YJL154C BNA6P43619 295 aa1.71□□□□□ -2.14
VPS35YJL154C HAM1P47119 197 aaKnown RBP1.71□□□□□ -2.14
VPS35YJL154C RMR1P53060 241 aa1.71□□□□□ -2.14
VPS35YJL154C VHT1P53241 593 aa1.71□□□□□ -2.14
VPS35YJL154C MPP6P53725 186 aaPredicted RBP1.71□□□□□ -2.14
VPS35YJL154C TPS1Q00764 495 aaKnown RBP1.71□□□□□ -2.14
VPS35YJL154C GTO3Q04806 366 aa1.71□□□□□ -2.14
VPS35YJL154C GMC2Q06201 188 aa1.71□□□□□ -2.14
VPS35YJL154C IZH4Q99393 312 aa1.71□□□□□ -2.14
VPS35YJL154C RIM15P43565 1770 aa1.7□□□□□ -2.14
VPS35YJL154C RSR1P13856 272 aa1.7□□□□□ -2.14
VPS35YJL154C INO2P26798 304 aa1.7□□□□□ -2.14
VPS35YJL154C ARO4P32449 370 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C SPS19P32573 292 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C GDH2P33327 1092 aaKnown RBP1.7□□□□□ -2.14
VPS35YJL154C RCK2P38623 610 aa1.7□□□□□ -2.14
VPS35YJL154C RTC3P38804 111 aaPredicted RBP1.7□□□□□ -2.14
VPS35YJL154C PET100P38958 111 aa1.7□□□□□ -2.14
VPS35YJL154C YIA6P40556 373 aa1.7□□□□□ -2.14
VPS35YJL154C YCH1P42937 148 aa1.7□□□□□ -2.14
VPS35YJL154C GCD14P46959 383 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms