RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR043C	YIR043C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
YIR043C	YIR043C	DAL81	P21657	970 aa		4.22	□□□□□ -1.73
YIR043C	YIR043C	LDB16	P25587	256 aa		4.22	□□□□□ -1.73
YIR043C	YIR043C	ARO4	P32449	370 aa	Known RBP	4.22	□□□□□ -1.73
YIR043C	YIR043C	AEP1	P32493	518 aa		4.22	□□□□□ -1.73
YIR043C	YIR043C	SUA5	P32579	426 aa		4.22	□□□□□ -1.73
YIR043C	YIR043C	ECM34	P38728	170 aa		4.22	□□□□□ -1.73
YIR043C	YIR043C	SRL4	Q03085	281 aa		4.22	□□□□□ -1.73
YIR043C	YIR043C	UTP15	Q04305	513 aa	Known RBP	4.22	□□□□□ -1.73
YIR043C	YIR043C	SDO1	Q07953	250 aa	Known RBP	4.22	□□□□□ -1.73
YIR043C	YIR043C	RUD3	Q12234	484 aa	Known RBP	4.22	□□□□□ -1.73
YIR043C	YIR043C	CFT1	Q06632	1357 aa	Known RBP	4.22	□□□□□ -1.73
YIR043C	YIR043C	PET494	P07390	489 aa	Predicted RBP	4.21	□□□□□ -1.74
YIR043C	YIR043C	PRS1	P32895	427 aa	Known RBP	4.21	□□□□□ -1.74
YIR043C	YIR043C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YIR043C	YIR043C	FRM2	P37261	193 aa		4.21	□□□□□ -1.74
YIR043C	YIR043C	PRS4	P38063	326 aa	Predicted RBP	4.21	□□□□□ -1.74
YIR043C	YIR043C	ATG12	P38316	186 aa		4.21	□□□□□ -1.74
YIR043C	YIR043C	NPT1	P39683	429 aa	Known RBP	4.21	□□□□□ -1.74
YIR043C	YIR043C	TIM21	P53220	239 aa		4.21	□□□□□ -1.74
YIR043C	YIR043C	YML018C	Q03730	393 aa		4.21	□□□□□ -1.74
YIR043C	YIR043C	ATG31	Q12421	196 aa		4.21	□□□□□ -1.74
YIR043C	YIR043C	YAL067W-A	Q8TGK6	75 aa		4.21	□□□□□ -1.74
YIR043C	YIR043C	RPS3	P05750	240 aa	Known RBP	4.2	□□□□□ -1.74
YIR043C	YIR043C	YCR016W	P25617	290 aa	Known RBP	4.2	□□□□□ -1.74
YIR043C	YIR043C	ZRT3	P34240	503 aa		4.2	□□□□□ -1.74
YIR043C	YIR043C	IBA57	P47158	497 aa		4.2	□□□□□ -1.74
YIR043C	YIR043C	NBP1	P52919	319 aa	Predicted RBP	4.2	□□□□□ -1.74
YIR043C	YIR043C	MNT4	P53745	580 aa		4.2	□□□□□ -1.74
YIR043C	YIR043C	TRM44	Q02648	567 aa	Known RBP	4.2	□□□□□ -1.74
YIR043C	YIR043C	TSA2	Q04120	196 aa		4.2	□□□□□ -1.74
YIR043C	YIR043C	ADH1	P00330	348 aa	Known RBP	4.19	□□□□□ -1.74
YIR043C	YIR043C	RPP0	P05317	312 aa	Known RBP	4.19	□□□□□ -1.74
YIR043C	YIR043C	CBP6	P07253	162 aa	Predicted RBP	4.19	□□□□□ -1.74
YIR043C	YIR043C	IMP1	P28627	190 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	MSN4	P33749	630 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	YOX1	P34161	385 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	MBA1	P38300	278 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	DED81	P38707	554 aa	Known RBP	4.19	□□□□□ -1.74
YIR043C	YIR043C	RRG9	P40156	214 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	YIL012W	P40551	113 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	RPL10	P41805	221 aa	Known RBP	4.19	□□□□□ -1.74
YIR043C	YIR043C	ASG7	P46993	209 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	YJR012C	P47087	207 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	COG7	P53195	279 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	YGR018C	P53211	109 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	RNY1	Q02933	434 aa	Known RBP	4.19	□□□□□ -1.74
YIR043C	YIR043C	YDR209C	Q03480	137 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	PAM18	Q07914	168 aa		4.19	□□□□□ -1.74
YIR043C	YIR043C	FLO11	P08640	1367 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	YCR025C	P25352	136 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	PRS2	P38620	318 aa	Known RBP	4.18	□□□□□ -1.74
YIR043C	YIR043C	KRE29	P40026	464 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	MRPL50	P53724	139 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	VPS60	Q03390	229 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	SEC10	Q06245	871 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	MSH5	Q12175	901 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	TRM10	Q12400	293 aa		4.18	□□□□□ -1.74
YIR043C	YIR043C	SRB4	P32569	687 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	AIM29	P36154	155 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	MRPL3	P36516	390 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	SHC1	P39000	512 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	SEN34	P39707	275 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	YER085C	P40058	173 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	AVT7	P40501	490 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	YFL064C	P43540	174 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	YGL118C	P53132	145 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	GRX3	Q03835	250 aa		4.17	□□□□□ -1.74
YIR043C	YIR043C	ARC18	Q05933	178 aa	Known RBP	4.17	□□□□□ -1.74
YIR043C	YIR043C	DBP7	P36120	742 aa	Known RBP	4.16	□□□□□ -1.74
YIR043C	YIR043C	TCD1	P38756	429 aa		4.16	□□□□□ -1.74
YIR043C	YIR043C	PRP24	P49960	444 aa	Known RBP	4.16	□□□□□ -1.74
YIR043C	YIR043C	MAL13	P53338	473 aa		4.16	□□□□□ -1.74
YIR043C	YIR043C	YPL113C	Q02961	396 aa		4.16	□□□□□ -1.74
YIR043C	YIR043C	EBS1	Q03466	884 aa	Known RBP	4.16	□□□□□ -1.74
YIR043C	YIR043C	MYO5	Q04439	1219 aa	Known RBP	4.16	□□□□□ -1.74
YIR043C	YIR043C	TIR4	Q12218	487 aa	Predicted RBP	4.16	□□□□□ -1.74
YIR043C	YIR043C	SME1	Q12330	94 aa	Predicted RBP	4.16	□□□□□ -1.74
YIR043C	YIR043C	YOS9	Q99220	542 aa		4.16	□□□□□ -1.74
YIR043C	YIR043C	YOL085C	Q99345	113 aa		4.16	□□□□□ -1.74
YIR043C	YIR043C	YMR316C-A	I2HB70	103 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	ATG15	P25641	520 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	PEX3	P28795	441 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	MRP21	P38175	177 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	SER33	P40510	469 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	YIL054W	P40524	105 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	MIC19	P43594	170 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	MRS2	Q01926	470 aa		4.15	□□□□□ -1.75
YIR043C	YIR043C	DFM1	Q12743	341 aa	Known RBP	4.15	□□□□□ -1.75
YIR043C	YIR043C	YAL064W-B	O13512	126 aa		4.14	□□□□□ -1.75
YIR043C	YIR043C	TPI1	P00942	248 aa	Known RBP	4.14	□□□□□ -1.75
YIR043C	YIR043C	ZIP1	P31111	875 aa		4.14	□□□□□ -1.75
YIR043C	YIR043C	TPS2	P31688	896 aa	Known RBP	4.14	□□□□□ -1.75
YIR043C	YIR043C	QRI5	P32344	111 aa		4.14	□□□□□ -1.75
YIR043C	YIR043C	KRE6	P32486	720 aa		4.14	□□□□□ -1.75
YIR043C	YIR043C	ALK2	P32789	676 aa	Predicted RBP	4.14	□□□□□ -1.75
YIR043C	YIR043C	LDB7	P38210	180 aa		4.14	□□□□□ -1.75
YIR043C	YIR043C	CWC21	Q03375	135 aa	Known RBP	4.14	□□□□□ -1.75
YIR043C	YIR043C	ECM19	Q06011	112 aa		4.14	□□□□□ -1.75
YIR043C	YIR043C	STH1	P32597	1359 aa		4.14	□□□□□ -1.75

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