RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	RPS23A	P0CX29	145 aa	Known RBP	3.18	□□□□□ -1.9
SGN1	YIR001C	RPS23B	P0CX30	145 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	PET9	P18239	318 aa	Known RBP	3.18	□□□□□ -1.9
SGN1	YIR001C	CSM1	P25651	190 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	PCL2	P25693	308 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	PRE2	P30656	287 aa	Known RBP	3.18	□□□□□ -1.9
SGN1	YIR001C	ARC19	P33204	171 aa	Known RBP	3.18	□□□□□ -1.9
SGN1	YIR001C	MSN4	P33749	630 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	ECM15	P35195	104 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	CUE2	P36075	443 aa	Known RBP	3.18	□□□□□ -1.9
SGN1	YIR001C	PEX18	P38855	283 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	YJL055W	P47044	245 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	MTL1	P53214	551 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	COG2	P53271	262 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	MEP3	P53390	489 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	MPP6	P53725	186 aa	Predicted RBP	3.18	□□□□□ -1.9
SGN1	YIR001C	YNL046W	P53956	172 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	PET191	Q02772	108 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	GMC1	Q04399	608 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	HSP31	Q04432	237 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	DYN3	Q04949	312 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	ARO10	Q06408	635 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	THP1	Q08231	455 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	TAF3	Q12297	353 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	YOL087C	Q99247	1116 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	ARO3	P14843	370 aa	Known RBP	3.17	□□□□□ -1.9
SGN1	YIR001C	PRP28	P23394	588 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	YCR100C	P25606	316 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	ATP7	P30902	174 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	ASF2	P32448	525 aa	Predicted RBP	3.17	□□□□□ -1.9
SGN1	YIR001C	VMA11	P32842	164 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	GDH2	P33327	1092 aa	Known RBP	3.17	□□□□□ -1.9
SGN1	YIR001C	SIP2	P34164	415 aa	Known RBP	3.17	□□□□□ -1.9
SGN1	YIR001C	SPT10	P35208	640 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	YKL071W	P36086	256 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	SWD1	P39706	426 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	SLZ1	P40167	298 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	HPM1	P40481	377 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	IAH1	P41734	238 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	YGL235W	P53071	178 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	PEF1	P53238	335 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	YMR102C	Q03177	834 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	YDR387C	Q04162	555 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	RNH202	Q05635	350 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	SNT309	Q06091	175 aa	Predicted RBP	3.17	□□□□□ -1.9
SGN1	YIR001C	PIN3	Q06449	215 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	ATG33	Q06485	197 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	IPK1	Q06667	281 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	MIM1	Q08176	113 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	HRT1	Q08273	121 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	SKI7	Q08491	747 aa	Predicted RBP	3.17	□□□□□ -1.9
SGN1	YIR001C	MUM3	Q08750	479 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	YDL199C	Q12407	687 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	APC2	Q12440	853 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	MRX4	Q12467	430 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	MHF2	Q3E829	80 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	Q0142	Q9ZZW4	58 aa		3.17	□□□□□ -1.9
SGN1	YIR001C	MSW1	P04803	379 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	RPL6B	P05739	176 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	HNM1	P19807	563 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	APA2	P22108	325 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	RHB1	P25378	209 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	RPN2	P32565	945 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	TOA1	P32773	286 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	NIC96	P34077	839 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	BUR6	P40096	142 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	GLR1	P41921	483 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	IDS2	P46958	469 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	MDE1	P47095	244 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	BAT2	P47176	376 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	IMD4	P50094	524 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	SMM1	P53720	384 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	IGO1	P53897	168 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	APM1	Q00776	475 aa	Predicted RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	RRN5	Q02983	363 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	SVL3	Q03088	825 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	YMR279C	Q03263	540 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	DML1	Q03652	475 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	SEC13	Q04491	297 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	SNO4	Q04902	237 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	GAT3	Q07928	141 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	HSP33	Q08914	237 aa	Known RBP	3.16	□□□□□ -1.9
SGN1	YIR001C	HSP32	Q08992	237 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	YKL068W-A	Q3E826	78 aa		3.16	□□□□□ -1.9
SGN1	YIR001C	TIM9	O74700	87 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	PDE2	P06776	526 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	NFT1	P0CE68	1218 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YML003W	P0CF16	290 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	POL4	P25615	582 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	PEX3	P28795	441 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	DGR2	P32330	852 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	VPH2	P32341	215 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	GLC7	P32598	312 aa	Known RBP	3.15	□□□□□ -1.91
SGN1	YIR001C	YME2	P32843	850 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	APL3	P38065	1025 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YBR096W	P38256	230 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	SSZ1	P38788	538 aa	Known RBP	3.15	□□□□□ -1.91
SGN1	YIR001C	RCY1	P39531	840 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YER184C	P39961	794 aa		3.15	□□□□□ -1.91
SGN1	YIR001C	YEL068C	P39977	110 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms