RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W RPS13P05756 151 aaKnown RBP12.38□□□□□ -0.43
RPN10YHR200W ITR1P30605 584 aa12.38□□□□□ -0.43
RPN10YHR200W MCM10P32354 571 aa12.38□□□□□ -0.43
RPN10YHR200W RPC34P32910 317 aa12.38□□□□□ -0.43
RPN10YHR200W ZRT3P34240 503 aa12.38□□□□□ -0.43
RPN10YHR200W RFC4P40339 323 aaKnown RBP12.38□□□□□ -0.43
RPN10YHR200W MTM1P53320 366 aa12.38□□□□□ -0.43
RPN10YHR200W YKR005CQ02203 525 aa12.38□□□□□ -0.43
RPN10YHR200W PEX10Q05568 337 aa12.38□□□□□ -0.43
RPN10YHR200W YPL199CQ08954 240 aa12.38□□□□□ -0.43
RPN10YHR200W RCN2Q12044 265 aa12.38□□□□□ -0.43
RPN10YHR200W RTC5Q12108 567 aaKnown RBP12.38□□□□□ -0.43
RPN10YHR200W RTN2Q12443 393 aa12.38□□□□□ -0.43
RPN10YHR200W RRI1Q12468 440 aa12.38□□□□□ -0.43
RPN10YHR200W PDE2P06776 526 aa12.37□□□□□ -0.43
RPN10YHR200W CAP2P13517 287 aa12.37□□□□□ -0.43
RPN10YHR200W CPR2P23285 205 aa12.37□□□□□ -0.43
RPN10YHR200W PPA2P28239 310 aa12.37□□□□□ -0.43
RPN10YHR200W HOM6P31116 359 aaKnown RBP12.37□□□□□ -0.43
RPN10YHR200W PEX32P38292 413 aa12.37□□□□□ -0.43
RPN10YHR200W YHK8P38776 514 aa12.37□□□□□ -0.43
RPN10YHR200W SLZ1P40167 298 aa12.37□□□□□ -0.43
RPN10YHR200W AIM20P40451 204 aa12.37□□□□□ -0.43
RPN10YHR200W BSC5P53755 489 aa12.37□□□□□ -0.43
RPN10YHR200W SSY1Q03770 852 aa12.37□□□□□ -0.43
RPN10YHR200W YMR130WQ04223 302 aa12.37□□□□□ -0.43
RPN10YHR200W YMR252CQ04814 134 aa12.37□□□□□ -0.43
RPN10YHR200W BRE4Q07660 1125 aa12.37□□□□□ -0.43
RPN10YHR200W SCEIP03882 235 aa12.36□□□□□ -0.43
RPN10YHR200W OPI3P05375 206 aa12.36□□□□□ -0.43
RPN10YHR200W NFS1P25374 497 aa12.36□□□□□ -0.43
RPN10YHR200W SFK1P35735 353 aa12.36□□□□□ -0.43
RPN10YHR200W STS1P38637 319 aa12.36□□□□□ -0.43
RPN10YHR200W BNA6P43619 295 aa12.36□□□□□ -0.43
RPN10YHR200W YGL204CP53089 101 aa12.36□□□□□ -0.43
RPN10YHR200W ATG4P53867 494 aa12.36□□□□□ -0.43
RPN10YHR200W HLR1Q04429 423 aa12.36□□□□□ -0.43
RPN10YHR200W HMS1Q12398 434 aa12.36□□□□□ -0.43
RPN10YHR200W ATS1P31386 333 aa12.35□□□□□ -0.43
RPN10YHR200W SPT14P32363 452 aa12.35□□□□□ -0.43
RPN10YHR200W LYS5P50113 272 aa12.35□□□□□ -0.43
RPN10YHR200W RMD9P53140 646 aaKnown RBP12.35□□□□□ -0.43
RPN10YHR200W CTS2Q06350 511 aa12.35□□□□□ -0.43
RPN10YHR200W Q0144Q9ZZW2 109 aa12.35□□□□□ -0.43
RPN10YHR200W RPL7AP05737 244 aaKnown RBP12.34□□□□□ -0.43
RPN10YHR200W PTC6P25646 442 aa12.34□□□□□ -0.43
RPN10YHR200W COS9P36034 407 aa12.34□□□□□ -0.43
RPN10YHR200W MOH1P38191 138 aa12.34□□□□□ -0.43
RPN10YHR200W SLS1P42900 643 aa12.34□□□□□ -0.43
RPN10YHR200W IRC18P47056 224 aa12.34□□□□□ -0.43
RPN10YHR200W RPA14P50106 137 aa12.34□□□□□ -0.43
RPN10YHR200W MRH4P53166 561 aa12.34□□□□□ -0.43
RPN10YHR200W RPL7BQ12213 244 aaKnown RBP12.34□□□□□ -0.43
RPN10YHR200W YHR214C-EQ8TGK0 99 aa12.34□□□□□ -0.43
RPN10YHR200W CBP6P07253 162 aaPredicted RBP12.33□□□□□ -0.44
RPN10YHR200W PDA1P16387 420 aaKnown RBP12.33□□□□□ -0.44
RPN10YHR200W STE18P18852 110 aa12.33□□□□□ -0.44
RPN10YHR200W MDH2P22133 377 aa12.33□□□□□ -0.44
RPN10YHR200W MEK1P24719 497 aaPredicted RBP12.33□□□□□ -0.44
RPN10YHR200W DOC1P53068 250 aa12.33□□□□□ -0.44
RPN10YHR200W ARO8P53090 500 aaKnown RBP12.33□□□□□ -0.44
RPN10YHR200W SLI1P53304 468 aa12.33□□□□□ -0.44
RPN10YHR200W SUR7P54003 302 aa12.33□□□□□ -0.44
RPN10YHR200W AIM36Q03798 255 aa12.33□□□□□ -0.44
RPN10YHR200W MSS11Q03825 758 aa12.33□□□□□ -0.44
RPN10YHR200W TGS1Q12052 315 aa12.33□□□□□ -0.44
RPN10YHR200W TIR4Q12218 487 aaPredicted RBP12.33□□□□□ -0.44
RPN10YHR200W HIS3P06633 220 aa12.32□□□□□ -0.44
RPN10YHR200W NAM2P11325 894 aa12.32□□□□□ -0.44
RPN10YHR200W DBF2P22204 572 aa12.32□□□□□ -0.44
RPN10YHR200W KRE6P32486 720 aa12.32□□□□□ -0.44
RPN10YHR200W YBR096WP38256 230 aa12.32□□□□□ -0.44
RPN10YHR200W SDS24P38314 527 aa12.32□□□□□ -0.44
RPN10YHR200W MIT1P40002 666 aa12.32□□□□□ -0.44
RPN10YHR200W AAD14P42884 376 aa12.32□□□□□ -0.44
RPN10YHR200W DPB11P47027 764 aaPredicted RBP12.32□□□□□ -0.44
RPN10YHR200W MSY1P48527 492 aa12.32□□□□□ -0.44
RPN10YHR200W SAM50P53969 484 aa12.32□□□□□ -0.44
RPN10YHR200W YLR152CP54072 576 aa12.32□□□□□ -0.44
RPN10YHR200W PET191Q02772 108 aa12.32□□□□□ -0.44
RPN10YHR200W ERF2Q06551 359 aa12.32□□□□□ -0.44
RPN10YHR200W MCH4Q08268 501 aa12.32□□□□□ -0.44
RPN10YHR200W MSL5Q12186 476 aaKnown RBP RIP-Chip data12.32□□□□□ -0.44not detected
RPN10YHR200W SOD2P00447 233 aa12.31□□□□□ -0.44
RPN10YHR200W CDC9P04819 755 aa12.31□□□□□ -0.44
RPN10YHR200W RPS18AP0CX55 146 aaKnown RBP12.31□□□□□ -0.44
RPN10YHR200W RPS18BP0CX56 146 aaPredicted RBP12.31□□□□□ -0.44
RPN10YHR200W CTA1P15202 515 aa12.31□□□□□ -0.44
RPN10YHR200W MGE1P38523 228 aa12.31□□□□□ -0.44
RPN10YHR200W PAM16P42949 149 aa12.31□□□□□ -0.44
RPN10YHR200W KAP120Q02932 1032 aa12.31□□□□□ -0.44
RPN10YHR200W DIG2Q03373 323 aaKnown RBP12.31□□□□□ -0.44
RPN10YHR200W AGE1Q04412 482 aa12.31□□□□□ -0.44
RPN10YHR200W HRI1Q05905 244 aaKnown RBP12.31□□□□□ -0.44
RPN10YHR200W PEX30Q06169 523 aa12.31□□□□□ -0.44
RPN10YHR200W YOR283WQ12040 230 aaKnown RBP12.31□□□□□ -0.44
RPN10YHR200W ADK1P07170 222 aaKnown RBP12.3□□□□□ -0.44
RPN10YHR200W SMB1P40018 196 aaKnown RBP12.3□□□□□ -0.44
RPN10YHR200W DLS1P40366 167 aa12.3□□□□□ -0.44
RPN10YHR200W ERV29P53337 310 aa12.3□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms