RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W CWC23P52868 283 aaPredicted RBP5.71□□□□□ -1.5
SNU71YGR013W HCH1P53834 153 aa5.71□□□□□ -1.5
SNU71YGR013W CMC2Q3E7A4 109 aa5.71□□□□□ -1.5
SNU71YGR013W REP1P03871 373 aa5.71□□□□□ -1.5
SNU71YGR013W RPS3P05750 240 aaKnown RBP5.71□□□□□ -1.5
SNU71YGR013W YMR31P19955 123 aa5.71□□□□□ -1.5
SNU71YGR013W VPS21P36017 210 aaKnown RBP5.71□□□□□ -1.5
SNU71YGR013W YPC1P38298 316 aa5.71□□□□□ -1.5
SNU71YGR013W THO1P40040 218 aaKnown RBP5.71□□□□□ -1.5
SNU71YGR013W DFG10P40526 253 aa5.71□□□□□ -1.5
SNU71YGR013W OST1P41543 476 aaKnown RBP5.71□□□□□ -1.5
SNU71YGR013W SEC13Q04491 297 aaKnown RBP5.71□□□□□ -1.5
SNU71YGR013W LAG2Q92325 660 aa5.71□□□□□ -1.5
SNU71YGR013W PDR18P53756 1333 aa5.7□□□□□ -1.5
SNU71YGR013W RPL16BP26785 198 aaKnown RBP5.7□□□□□ -1.5
SNU71YGR013W ADE1P27616 306 aa5.7□□□□□ -1.5
SNU71YGR013W SSO1P32867 290 aa5.7□□□□□ -1.5
SNU71YGR013W YKL187CP34231 750 aa5.7□□□□□ -1.5
SNU71YGR013W MCH2P36032 473 aa5.7□□□□□ -1.5
SNU71YGR013W MTC6P38849 526 aa5.7□□□□□ -1.5
SNU71YGR013W YNL194CP40169 301 aa5.7□□□□□ -1.5
SNU71YGR013W RPL10P41805 221 aaKnown RBP5.7□□□□□ -1.5
SNU71YGR013W VEL1P53058 206 aa5.7□□□□□ -1.5
SNU71YGR013W CDH1P53197 566 aa5.7□□□□□ -1.5
SNU71YGR013W RDL2Q08742 149 aaKnown RBP5.7□□□□□ -1.5
SNU71YGR013W CSM4Q08955 156 aa5.7□□□□□ -1.5
SNU71YGR013W SRO7Q12038 1033 aa5.7□□□□□ -1.5
SNU71YGR013W PNS1Q12412 539 aa5.7□□□□□ -1.5
SNU71YGR013W POX1P13711 748 aa5.69□□□□□ -1.5
SNU71YGR013W BMH1P29311 267 aaKnown RBP5.69□□□□□ -1.5
SNU71YGR013W TPS2P31688 896 aaKnown RBP5.69□□□□□ -1.5
SNU71YGR013W TAF14P35189 244 aa5.69□□□□□ -1.5
SNU71YGR013W AVT5P38176 459 aa5.69□□□□□ -1.5
SNU71YGR013W IDP2P41939 412 aa5.69□□□□□ -1.5
SNU71YGR013W ERG13P54839 491 aaKnown RBP5.69□□□□□ -1.5
SNU71YGR013W RPM2Q02773 1202 aa5.69□□□□□ -1.5
SNU71YGR013W PLP1Q04004 230 aa5.69□□□□□ -1.5
SNU71YGR013W YMR027WQ04371 470 aa5.69□□□□□ -1.5
SNU71YGR013W GIM5Q04493 163 aa5.69□□□□□ -1.5
SNU71YGR013W YDR222WQ04925 415 aa5.69□□□□□ -1.5
SNU71YGR013W YBR121C-AP0C5L4 52 aa5.68□□□□□ -1.5
SNU71YGR013W AIM17P23180 465 aaKnown RBP5.68□□□□□ -1.5
SNU71YGR013W CPR3P25719 182 aa5.68□□□□□ -1.5
SNU71YGR013W ALG8P40351 577 aa5.68□□□□□ -1.5
SNU71YGR013W YIA6P40556 373 aa5.68□□□□□ -1.5
SNU71YGR013W JHD2P47156 728 aaPredicted RBP5.68□□□□□ -1.5
SNU71YGR013W SWC4P53201 476 aa5.68□□□□□ -1.5
SNU71YGR013W YNL040WP53960 456 aaPredicted RBP5.68□□□□□ -1.5
SNU71YGR013W YDR209CQ03480 137 aa5.68□□□□□ -1.5
SNU71YGR013W UTP23Q12339 254 aaKnown RBP5.68□□□□□ -1.5
SNU71YGR013W RPL27AP0C2H6 136 aaKnown RBP5.68□□□□□ -1.5
SNU71YGR013W RPL27BP0C2H7 136 aaKnown RBP5.68□□□□□ -1.5
SNU71YGR013W SPS100P13130 326 aa5.68□□□□□ -1.5
SNU71YGR013W TFS1P14306 219 aa5.68□□□□□ -1.5
SNU71YGR013W MDM10P18409 493 aa5.68□□□□□ -1.5
SNU71YGR013W RNA15P25299 296 aaPredicted RBP5.68□□□□□ -1.5
SNU71YGR013W AGA1P32323 725 aa5.68□□□□□ -1.5
SNU71YGR013W MIX23P38162 196 aa5.68□□□□□ -1.5
SNU71YGR013W YNL320WP42840 284 aa5.68□□□□□ -1.5
SNU71YGR013W UBC13P52490 153 aa5.68□□□□□ -1.5
SNU71YGR013W TMS1Q12116 473 aa5.68□□□□□ -1.5
SNU71YGR013W HIS3P06633 220 aa5.67□□□□□ -1.5
SNU71YGR013W VPH2P32341 215 aa5.67□□□□□ -1.5
SNU71YGR013W UBC6P33296 250 aaPredicted RBP5.67□□□□□ -1.5
SNU71YGR013W COX14P39103 70 aa5.67□□□□□ -1.5
SNU71YGR013W SNZ3P43545 298 aa5.67□□□□□ -1.5
SNU71YGR013W CIN2P46670 268 aa5.67□□□□□ -1.5
SNU71YGR013W APS3P47064 194 aa5.67□□□□□ -1.5
SNU71YGR013W MRM2P53123 320 aa5.67□□□□□ -1.5
SNU71YGR013W MTM1P53320 366 aa5.67□□□□□ -1.5
SNU71YGR013W SNZ2P53824 298 aa5.67□□□□□ -1.5
SNU71YGR013W DIA1P54005 336 aa5.67□□□□□ -1.5
SNU71YGR013W TRM82Q03774 444 aa5.67□□□□□ -1.5
SNU71YGR013W TAZ1Q06510 381 aa5.67□□□□□ -1.5
SNU71YGR013W CDD1Q06549 142 aa5.67□□□□□ -1.5
SNU71YGR013W NDE2Q07500 545 aa5.67□□□□□ -1.5
SNU71YGR013W YPL225WQ08971 146 aaKnown RBP5.67□□□□□ -1.5
SNU71YGR013W FRE8Q12209 686 aa5.67□□□□□ -1.5
SNU71YGR013W YCL012CQ8J0M4 134 aa5.67□□□□□ -1.5
SNU71YGR013W AI5_BETAQ9ZZX0 354 aa5.67□□□□□ -1.5
SNU71YGR013W NDC1P32500 655 aa5.66□□□□□ -1.5
SNU71YGR013W RAD5P32849 1169 aaPredicted RBP5.66□□□□□ -1.5
SNU71YGR013W SRL3P36167 246 aa5.66□□□□□ -1.5
SNU71YGR013W MAK5P38112 773 aaPredicted RBP5.66□□□□□ -1.5
SNU71YGR013W MTW1P39731 289 aa5.66□□□□□ -1.5
SNU71YGR013W SMB1P40018 196 aaKnown RBP5.66□□□□□ -1.5
SNU71YGR013W ASG7P46993 209 aa5.66□□□□□ -1.5
SNU71YGR013W RRP17Q04031 235 aaPredicted RBP5.66□□□□□ -1.5
SNU71YGR013W CTR3Q06686 241 aa5.66□□□□□ -1.5
SNU71YGR013W FIG2P25653 1609 aa5.66□□□□□ -1.5
SNU71YGR013W DUR1,2P32528 1835 aaKnown RBP5.66□□□□□ -1.5
SNU71YGR013W YDR157WA0A023PZE8 133 aa5.66□□□□□ -1.5
SNU71YGR013W CHA1P25379 360 aaKnown RBP5.66□□□□□ -1.5
SNU71YGR013W RPL16AP26784 199 aaKnown RBP5.66□□□□□ -1.5
SNU71YGR013W ATP7P30902 174 aa5.66□□□□□ -1.5
SNU71YGR013W SPO23P33757 523 aa5.66□□□□□ -1.5
SNU71YGR013W YBR242WP38331 238 aa5.66□□□□□ -1.5
SNU71YGR013W EGD2P38879 174 aaKnown RBP5.66□□□□□ -1.5
SNU71YGR013W SOP4P39543 234 aaPredicted RBP5.66□□□□□ -1.5
SNU71YGR013W YAT2P40017 923 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms