RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	PEX32	P38292	413 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	RPS26A	P39938	119 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	RPS26B	P39939	119 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	YEL057C	P39983	233 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MIT1	P40002	666 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MSY1	P48527	492 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	BSC5	P53755	489 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	CIK1	Q01649	594 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	ASR1	Q06834	288 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	SSK1	Q07084	712 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MIM1	Q08176	113 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	RPP2B	P02400	110 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	ADK1	P07170	222 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	RPS18A	P0CX55	146 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	RPS18B	P0CX56	146 aa	Predicted RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	MRP1	P10662	321 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	HMG1	P12683	1054 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	PDX1	P16451	410 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	AHC2	P25649	128 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	DOA4	P32571	926 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	RPC34	P32910	317 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MTH1	P35198	433 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MNN5	P46982	586 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	YJR120W	P47157	116 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	LYS20	P48570	428 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	PMT5	P52867	743 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	YGL260W	P53056	76 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	RMD9	P53140	646 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	APM1	Q00776	475 aa	Predicted RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	SSY1	Q03770	852 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MRX8	Q05473	314 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	MRPL35	Q06678	367 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	GRE1	Q08969	168 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	RCN2	Q12044	265 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	LYS21	Q12122	440 aa	Known RBP	4.86	□□□□□ -1.63
SHE10	YGL228W	SUS1	Q6WNK7	96 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	YHR214C-E	Q8TGK0	99 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	Q0144	Q9ZZW2	109 aa		4.86	□□□□□ -1.63
SHE10	YGL228W	SOD2	P00447	233 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	CDC9	P04819	755 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	UTR1	P21373	530 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	PCL1	P24867	279 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	ADH7	P25377	361 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	VPS17	P32913	551 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	ANR2	P36090	516 aa	Predicted RBP	4.85	□□□□□ -1.63
SHE10	YGL228W	MOH1	P38191	138 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	AIM3	P38266	947 aa	Known RBP	4.85	□□□□□ -1.63
SHE10	YGL228W	YER184C	P39961	794 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	FCY21	P40039	528 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	SEC24	P40482	926 aa	Known RBP	4.85	□□□□□ -1.63
SHE10	YGL228W	SLS1	P42900	643 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	SER2	P42941	309 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	ATG18	P43601	500 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	IMD3	P50095	523 aa	Known RBP	4.85	□□□□□ -1.63
SHE10	YGL228W	DOC1	P53068	250 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	KAP120	Q02932	1032 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	YDR514C	Q04408	483 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	GPN3	Q06543	272 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	YOL024W	Q08172	172 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	NIP7	Q08962	181 aa	Known RBP	4.85	□□□□□ -1.63
SHE10	YGL228W	ATG41	Q12048	136 aa		4.85	□□□□□ -1.63
SHE10	YGL228W	CDC31	P06704	161 aa	Known RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	COX9	P07255	59 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	CAM1	P29547	415 aa	Known RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	ERG24	P32462	438 aa	Known RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	PAU2	P32612	120 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	SOF1	P33750	489 aa	Known RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	TMA19	P35691	167 aa	Known RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	SRP102	P36057	244 aa	Predicted RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	IPI1	P38803	334 aa	Predicted RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	ADO1	P47143	340 aa	Known RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	MRP51	Q02950	344 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	PLB2	Q03674	706 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	SYC1	Q08553	188 aa	Predicted RBP	4.84	□□□□□ -1.63
SHE10	YGL228W	TMS1	Q12116	473 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	BAG7	Q12128	409 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	YBL113C	Q7M4S9	792 aa		4.84	□□□□□ -1.63
SHE10	YGL228W	GCN4	P03069	281 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	RPL7A	P05737	244 aa	Known RBP	4.83	□□□□□ -1.64
SHE10	YGL228W	HIS3	P06633	220 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	PHO4	P07270	312 aa	Known RBP	4.83	□□□□□ -1.64
SHE10	YGL228W	DBF2	P22204	572 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	MEK1	P24719	497 aa	Predicted RBP	4.83	□□□□□ -1.64
SHE10	YGL228W	KRR1	P25586	316 aa	Predicted RBP	4.83	□□□□□ -1.64
SHE10	YGL228W	ERG9	P29704	444 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	SPT14	P32363	452 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	SEC66	P33754	206 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	SPT10	P35208	640 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SHE10	YGL228W	MBA1	P38300	278 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	TIR3	P40552	269 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	YJL055W	P47044	245 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	ERV29	P53337	310 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	YNR040W	P53736	256 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	AIM36	Q03798	255 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	NNT1	Q05874	261 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	COQ11	Q05892	277 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	TSR2	Q06672	205 aa	Known RBP	4.83	□□□□□ -1.64
SHE10	YGL228W	MCH4	Q08268	501 aa		4.83	□□□□□ -1.64
SHE10	YGL228W	RPL7B	Q12213	244 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms