RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C HLR1Q04429 423 aa6.97□□□□□ -1.29
PUP3YER094C MIM1Q08176 113 aa6.97□□□□□ -1.29
PUP3YER094C TIR4Q12218 487 aaPredicted RBP6.97□□□□□ -1.29
PUP3YER094C Q0144Q9ZZW2 109 aa6.97□□□□□ -1.29
PUP3YER094C RPL7AP05737 244 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C ADK1P07170 222 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C STE12P13574 688 aa6.96□□□□□ -1.3
PUP3YER094C CAM1P29547 415 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C ATS1P31386 333 aa6.96□□□□□ -1.3
PUP3YER094C THI4P32318 326 aa6.96□□□□□ -1.3
PUP3YER094C SPT10P35208 640 aa6.96□□□□□ -1.3
PUP3YER094C TMA19P35691 167 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C MOH1P38191 138 aa6.96□□□□□ -1.3
PUP3YER094C PEX32P38292 413 aa6.96□□□□□ -1.3
PUP3YER094C YHK8P38776 514 aa6.96□□□□□ -1.3
PUP3YER094C IPI1P38803 334 aaPredicted RBP6.96□□□□□ -1.3
PUP3YER094C CHS7P38843 316 aa6.96□□□□□ -1.3
PUP3YER094C RPS26AP39938 119 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C RPS26BP39939 119 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C YIL169CP40442 995 aa6.96□□□□□ -1.3
PUP3YER094C SER2P42941 309 aa6.96□□□□□ -1.3
PUP3YER094C CCC1P47818 322 aa6.96□□□□□ -1.3
PUP3YER094C PET191Q02772 108 aa6.96□□□□□ -1.3
PUP3YER094C SSY1Q03770 852 aa6.96□□□□□ -1.3
PUP3YER094C AGE1Q04412 482 aa6.96□□□□□ -1.3
PUP3YER094C TSR2Q06672 205 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C LUC7Q07508 261 aaPredicted RBP6.96□□□□□ -1.3
PUP3YER094C RPL7BQ12213 244 aaKnown RBP6.96□□□□□ -1.3
PUP3YER094C YHR214C-EQ8TGK0 99 aa6.96□□□□□ -1.3
PUP3YER094C FLO9P39712 1322 aa6.96□□□□□ -1.3
PUP3YER094C QCR7P00128 127 aa6.95□□□□□ -1.3
PUP3YER094C SOD2P00447 233 aa6.95□□□□□ -1.3
PUP3YER094C GCN4P03069 281 aa6.95□□□□□ -1.3
PUP3YER094C PDE2P06776 526 aa6.95□□□□□ -1.3
PUP3YER094C COX9P07255 59 aa6.95□□□□□ -1.3
PUP3YER094C RPS18AP0CX55 146 aaKnown RBP6.95□□□□□ -1.3
PUP3YER094C RPS18BP0CX56 146 aaPredicted RBP6.95□□□□□ -1.3
PUP3YER094C PAU2P32612 120 aa6.95□□□□□ -1.3
PUP3YER094C ANR2P36090 516 aaPredicted RBP6.95□□□□□ -1.3
PUP3YER094C MBA1P38300 278 aa6.95□□□□□ -1.3
PUP3YER094C MIT1P40002 666 aa6.95□□□□□ -1.3
PUP3YER094C MNN5P46982 586 aa6.95□□□□□ -1.3
PUP3YER094C YJL055WP47044 245 aa6.95□□□□□ -1.3
PUP3YER094C MSY1P48527 492 aa6.95□□□□□ -1.3
PUP3YER094C RSM24Q03976 319 aa6.95□□□□□ -1.3
PUP3YER094C NNT1Q05874 261 aa6.95□□□□□ -1.3
PUP3YER094C RGC1Q06108 1083 aaKnown RBP6.95□□□□□ -1.3
PUP3YER094C GRE1Q08969 168 aa6.95□□□□□ -1.3
PUP3YER094C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
PUP3YER094C CDC9P04819 755 aa6.94□□□□□ -1.3
PUP3YER094C CBP6P07253 162 aaPredicted RBP6.94□□□□□ -1.3
PUP3YER094C PBS2P08018 668 aa6.94□□□□□ -1.3
PUP3YER094C DBF2P22204 572 aa6.94□□□□□ -1.3
PUP3YER094C MEK1P24719 497 aaPredicted RBP6.94□□□□□ -1.3
PUP3YER094C HOM6P31116 359 aaKnown RBP6.94□□□□□ -1.3
PUP3YER094C TIR3P40552 269 aa6.94□□□□□ -1.3
PUP3YER094C SLS1P42900 643 aa6.94□□□□□ -1.3
PUP3YER094C PRY1P47032 299 aa6.94□□□□□ -1.3
PUP3YER094C YJR120WP47157 116 aa6.94□□□□□ -1.3
PUP3YER094C YGL260WP53056 76 aa6.94□□□□□ -1.3
PUP3YER094C DOC1P53068 250 aa6.94□□□□□ -1.3
PUP3YER094C MRH4P53166 561 aa6.94□□□□□ -1.3
PUP3YER094C SUR7P54003 302 aa6.94□□□□□ -1.3
PUP3YER094C KAP120Q02932 1032 aa6.94□□□□□ -1.3
PUP3YER094C MSS11Q03825 758 aa6.94□□□□□ -1.3
PUP3YER094C RVB1Q03940 463 aaKnown RBP6.94□□□□□ -1.3
PUP3YER094C SSK1Q07084 712 aa6.94□□□□□ -1.3
PUP3YER094C RCN2Q12044 265 aa6.94□□□□□ -1.3
PUP3YER094C RTC5Q12108 567 aaKnown RBP6.94□□□□□ -1.3
PUP3YER094C TY1A-BLQ12266 440 aa6.94□□□□□ -1.3
PUP3YER094C ERG9P29704 444 aa6.93□□□□□ -1.3
PUP3YER094C SOF1P33750 489 aaKnown RBP6.93□□□□□ -1.3
PUP3YER094C SFK1P35735 353 aa6.93□□□□□ -1.3
PUP3YER094C CCZ1P38273 704 aa6.93□□□□□ -1.3
PUP3YER094C YEL057CP39983 233 aa6.93□□□□□ -1.3
PUP3YER094C SLZ1P40167 298 aa6.93□□□□□ -1.3
PUP3YER094C DPB11P47027 764 aaPredicted RBP6.93□□□□□ -1.3
PUP3YER094C ADO1P47143 340 aaKnown RBP6.93□□□□□ -1.3
PUP3YER094C RPA14P50106 137 aa6.93□□□□□ -1.3
PUP3YER094C PEX10Q05568 337 aa6.93□□□□□ -1.3
PUP3YER094C NMA1Q06178 401 aaKnown RBP6.93□□□□□ -1.3
PUP3YER094C RTN2Q12443 393 aa6.93□□□□□ -1.3
PUP3YER094C RRI1Q12468 440 aa6.93□□□□□ -1.3
PUP3YER094C GCN1P33892 2672 aaKnown RBP6.92□□□□□ -1.3
PUP3YER094C HIS3P06633 220 aa6.92□□□□□ -1.3
PUP3YER094C CAP2P13517 287 aa6.92□□□□□ -1.3
PUP3YER094C ITR1P30605 584 aa6.92□□□□□ -1.3
PUP3YER094C SPT14P32363 452 aa6.92□□□□□ -1.3
PUP3YER094C SEC66P33754 206 aa6.92□□□□□ -1.3
PUP3YER094C SDS24P38314 527 aa6.92□□□□□ -1.3
PUP3YER094C AAD14P42884 376 aa6.92□□□□□ -1.3
PUP3YER094C IRC18P47056 224 aa6.92□□□□□ -1.3
PUP3YER094C LYS20P48570 428 aaKnown RBP6.92□□□□□ -1.3
PUP3YER094C YGL204CP53089 101 aa6.92□□□□□ -1.3
PUP3YER094C RMD9P53140 646 aaKnown RBP6.92□□□□□ -1.3
PUP3YER094C MTM1P53320 366 aa6.92□□□□□ -1.3
PUP3YER094C ERV29P53337 310 aa6.92□□□□□ -1.3
PUP3YER094C SAM50P53969 484 aa6.92□□□□□ -1.3
PUP3YER094C YKR005CQ02203 525 aa6.92□□□□□ -1.3
PUP3YER094C AIM36Q03798 255 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms