RNA–Protein interactions for RNA: YDR261C-C

YDR261C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261C-C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-CYDR261C-C ZIP1P31111 875 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C SPS19P32573 292 aaKnown RBP3.59□□□□□ -1.83
YDR261C-CYDR261C-C ATG12P38316 186 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C YGL262WP53054 175 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C PEX31P53203 462 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C FMP48P53233 369 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C RNY1Q02933 434 aaKnown RBP3.59□□□□□ -1.83
YDR261C-CYDR261C-C ADH6Q04894 360 aaKnown RBP3.59□□□□□ -1.83
YDR261C-CYDR261C-C VIK1Q12045 647 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C TRM10Q12400 293 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C TFC7Q12415 435 aa3.59□□□□□ -1.83
YDR261C-CYDR261C-C HIS1P00498 297 aaKnown RBP3.58□□□□□ -1.84
YDR261C-CYDR261C-C ASP3-2P0CX77 362 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C ASP3-3P0CX78 362 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C ASP3-4P0CX79 362 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C ASP3-1P0CZ17 362 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C YCR025CP25352 136 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C ATG15P25641 520 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C VPH2P32341 215 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C CDC13P32797 924 aaKnown RBP3.58□□□□□ -1.84
YDR261C-CYDR261C-C FRM2P37261 193 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C PRS2P38620 318 aaKnown RBP3.58□□□□□ -1.84
YDR261C-CYDR261C-C DED81P38707 554 aaKnown RBP3.58□□□□□ -1.84
YDR261C-CYDR261C-C RRT13P40042 185 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C TAD2P47058 250 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C HAL1Q01766 294 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C PET117Q02771 107 aa3.58□□□□□ -1.84
YDR261C-CYDR261C-C RUD3Q12234 484 aaKnown RBP3.58□□□□□ -1.84
YDR261C-CYDR261C-C REV1P12689 985 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C EPT1P22140 391 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C SER33P40510 469 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C VEL1P53058 206 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C SWS2P53937 143 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C INP1Q03694 420 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C YMR244WQ04018 355 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C PIN3Q06449 215 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C YOL029CQ08187 201 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C SME1Q12330 94 aaPredicted RBP3.57□□□□□ -1.84
YDR261C-CYDR261C-C DFM1Q12743 341 aaKnown RBP3.57□□□□□ -1.84
YDR261C-CYDR261C-C YAL067W-AQ8TGK6 75 aa3.57□□□□□ -1.84
YDR261C-CYDR261C-C PRS1P32895 427 aaKnown RBP3.56□□□□□ -1.84
YDR261C-CYDR261C-C ZRT3P34240 503 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C UTH1P36135 365 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C MRX3P38172 270 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C YER184CP39961 794 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C YER085CP40058 173 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C NBP1P52919 319 aaPredicted RBP3.56□□□□□ -1.84
YDR261C-CYDR261C-C ACT1P60010 375 aaKnown RBP3.56□□□□□ -1.84
YDR261C-CYDR261C-C VPS60Q03390 229 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C ECM19Q06011 112 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C SEC10Q06245 871 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C MSH5Q12175 901 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C YAL063C-AQ3E791 96 aa3.56□□□□□ -1.84
YDR261C-CYDR261C-C RPS5P26783 225 aaKnown RBP3.55□□□□□ -1.84
YDR261C-CYDR261C-C DBP7P36120 742 aaKnown RBP3.55□□□□□ -1.84
YDR261C-CYDR261C-C GCN20P43535 752 aaKnown RBP3.55□□□□□ -1.84
YDR261C-CYDR261C-C YFL064CP43540 174 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C MIC19P43594 170 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C HIT1P46973 164 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C ASG7P46993 209 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C NBP35P52920 328 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C LIF1P53150 421 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C MAL13P53338 473 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C YLR283WQ05867 314 aa3.55□□□□□ -1.84
YDR261C-CYDR261C-C DIB1Q06819 143 aaPredicted RBP3.55□□□□□ -1.84
YDR261C-CYDR261C-C TIR4Q12218 487 aaPredicted RBP3.55□□□□□ -1.84
YDR261C-CYDR261C-C PSK1P31374 1356 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C YAL064W-BO13512 126 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C MRP1P10662 321 aaKnown RBP3.54□□□□□ -1.84
YDR261C-CYDR261C-C RPB9P27999 122 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C MSN4P33749 630 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C AVT7P40501 490 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C GLG2P47011 380 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C SDC1Q03323 175 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C CTR3Q06686 241 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C PAM18Q07914 168 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C YOS9Q99220 542 aa3.54□□□□□ -1.84
YDR261C-CYDR261C-C TDH2P00358 332 aaKnown RBP3.53□□□□□ -1.84
YDR261C-CYDR261C-C RPO26P20435 155 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C COX10P21592 462 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C PEX3P28795 441 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C ALK2P32789 676 aaPredicted RBP3.53□□□□□ -1.84
YDR261C-CYDR261C-C AIM29P36154 155 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C MRPL3P36516 390 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C SHC1P39000 512 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C DSN1P40568 576 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C RPL10P41805 221 aaKnown RBP3.53□□□□□ -1.84
YDR261C-CYDR261C-C YPL113CQ02961 396 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C CSM4Q08955 156 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C PER33Q12144 273 aa3.53□□□□□ -1.84
YDR261C-CYDR261C-C CFT1Q06632 1357 aaKnown RBP3.52□□□□□ -1.85
YDR261C-CYDR261C-C SOD1P00445 154 aaKnown RBP3.52□□□□□ -1.85
YDR261C-CYDR261C-C YCR016WP25617 290 aaKnown RBP3.52□□□□□ -1.85
YDR261C-CYDR261C-C EHD3P28817 500 aa3.52□□□□□ -1.85
YDR261C-CYDR261C-C QRI5P32344 111 aa3.52□□□□□ -1.85
YDR261C-CYDR261C-C ECM34P38728 170 aa3.52□□□□□ -1.85
YDR261C-CYDR261C-C BFR1P38934 470 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
YDR261C-CYDR261C-C SMB1P40018 196 aaKnown RBP3.52□□□□□ -1.85
YDR261C-CYDR261C-C YJR012CP47087 207 aa3.52□□□□□ -1.85
YDR261C-CYDR261C-C UTP15Q04305 513 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms