RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	SPT7	P35177	1332 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	STE3	P06783	470 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	YCR102C	P25608	368 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	MCH2	P36032	473 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	EBP2	P36049	427 aa	Known RBP	0.86	□□□□□ -2.27
SWF1	YDR126W	VAB2	P40003	282 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	AYR1	P40471	297 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	YNL146W	P53906	100 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	ISD11	Q6Q560	94 aa		0.86	□□□□□ -2.27
SWF1	YDR126W	VMA2	P16140	517 aa	Known RBP	0.85	□□□□□ -2.27
SWF1	YDR126W	VPH1	P32563	840 aa	Known RBP	0.85	□□□□□ -2.27
SWF1	YDR126W	APE4	P38821	490 aa		0.85	□□□□□ -2.27
SWF1	YDR126W	RSC1	P53236	928 aa		0.85	□□□□□ -2.27
SWF1	YDR126W	MRS2	Q01926	470 aa		0.85	□□□□□ -2.27
SWF1	YDR126W	MGR3	Q04472	501 aa		0.85	□□□□□ -2.27
SWF1	YDR126W	BUR2	Q05949	395 aa		0.85	□□□□□ -2.27
SWF1	YDR126W	YDR262W	Q12331	272 aa		0.85	□□□□□ -2.27
SWF1	YDR126W	OPI1	P21957	404 aa		0.84	□□□□□ -2.27
SWF1	YDR126W	ADH5	P38113	351 aa	Known RBP	0.84	□□□□□ -2.27
SWF1	YDR126W	RXT2	P38255	430 aa		0.84	□□□□□ -2.27
SWF1	YDR126W	YGL114W	P53134	725 aa		0.84	□□□□□ -2.27
SWF1	YDR126W	COG7	P53195	279 aa		0.84	□□□□□ -2.27
SWF1	YDR126W	INM2	Q05533	292 aa		0.84	□□□□□ -2.27
SWF1	YDR126W	YPL247C	Q12523	523 aa		0.84	□□□□□ -2.27
SWF1	YDR126W	YEL009C-A	A0A023PZF2	135 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	STF1	P01098	86 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	TOM40	P23644	387 aa	Known RBP	0.83	□□□□□ -2.28
SWF1	YDR126W	KRR1	P25586	316 aa	Predicted RBP	0.83	□□□□□ -2.28
SWF1	YDR126W	ATG15	P25641	520 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	UIP5	P36137	443 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	YDR089W	P38966	869 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	RPE1	P46969	238 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	YIL002W-A	Q3E7Z5	69 aa		0.83	□□□□□ -2.28
SWF1	YDR126W	TAL1	P15019	335 aa	Known RBP	0.82	□□□□□ -2.28
SWF1	YDR126W	ZRT1	P32804	376 aa		0.82	□□□□□ -2.28
SWF1	YDR126W	IMP3	P32899	183 aa	Predicted RBP	0.82	□□□□□ -2.28
SWF1	YDR126W	RPS0A	P32905	252 aa	Known RBP	0.82	□□□□□ -2.28
SWF1	YDR126W	TIF34	P40217	347 aa	Known RBP	0.82	□□□□□ -2.28
SWF1	YDR126W	YJL118W	P47022	219 aa		0.82	□□□□□ -2.28
SWF1	YDR126W	UBC13	P52490	153 aa		0.82	□□□□□ -2.28
SWF1	YDR126W	ARP5	P53946	755 aa		0.82	□□□□□ -2.28
SWF1	YDR126W	STE23	Q06010	1027 aa		0.82	□□□□□ -2.28
SWF1	YDR126W	DBP9	Q06218	594 aa	Known RBP	0.82	□□□□□ -2.28
SWF1	YDR126W	NOT5	Q12514	560 aa	Predicted RBP	0.82	□□□□□ -2.28
SWF1	YDR126W	RAD7	P06779	565 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	RNR2	P09938	399 aa	Known RBP	0.81	□□□□□ -2.28
SWF1	YDR126W	SAR1	P20606	190 aa	Known RBP	0.81	□□□□□ -2.28
SWF1	YDR126W	TRX1	P22217	103 aa	Known RBP	0.81	□□□□□ -2.28
SWF1	YDR126W	PET18	P25362	215 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	DAL80	P26343	269 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	BMH1	P29311	267 aa	Known RBP	0.81	□□□□□ -2.28
SWF1	YDR126W	SMI1	P32566	505 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	DOA4	P32571	926 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	LAS1	P36146	502 aa	Predicted RBP	0.81	□□□□□ -2.28
SWF1	YDR126W	YPC1	P38298	316 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	INA22	P40576	216 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	LOH1	P47055	219 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	YGR168C	P53293	376 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	OKP1	P53298	406 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	FRE6	Q12473	712 aa		0.81	□□□□□ -2.28
SWF1	YDR126W	CDC37	P06101	506 aa	Known RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	GCD2	P12754	651 aa	Predicted RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	TPM1	P17536	199 aa	Known RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	ERG2	P32352	222 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	PHO89	P38361	574 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	TDA11	P38854	504 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	SPT8	P38915	602 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	SSO2	P39926	295 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	YER135C	P40082	130 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	AVT7	P40501	490 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	CUE3	P53137	624 aa	Known RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	SWC4	P53201	476 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	VOA1	P53262	265 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	PDR16	P53860	351 aa	Known RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	EGD1	Q02642	157 aa	Known RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	YMR114C	Q04471	368 aa	Known RBP	0.8	□□□□□ -2.28
SWF1	YDR126W	YLR297W	Q05899	129 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	PGC1	Q08959	321 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	YBL112C	Q3E7Y4	105 aa		0.8	□□□□□ -2.28
SWF1	YDR126W	RPL18A	P0CX49	186 aa	Known RBP	0.79	□□□□□ -2.28
SWF1	YDR126W	RPL18B	P0CX50	186 aa	Known RBP	0.79	□□□□□ -2.28
SWF1	YDR126W	AEP1	P32493	518 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
SWF1	YDR126W	SIF2	P38262	535 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	PET100	P38958	111 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	SHQ1	P40486	507 aa	Predicted RBP	0.79	□□□□□ -2.28
SWF1	YDR126W	RPL10	P41805	221 aa	Known RBP	0.79	□□□□□ -2.28
SWF1	YDR126W	GON7	P46984	123 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	COX16	P47081	118 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	KEL2	P50090	882 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	YPT32	P51996	222 aa	Known RBP	0.79	□□□□□ -2.28
SWF1	YDR126W	DAD3	P69850	94 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	YPL039W	Q03080	316 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	ECM18	Q04623	453 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	NFI1	Q12216	726 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	IZH4	Q99393	312 aa		0.79	□□□□□ -2.28
SWF1	YDR126W	CDC7	P06243	507 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	PUT1	P09368	476 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	MSS116	P15424	664 aa	Known RBP	0.78	□□□□□ -2.28
SWF1	YDR126W	RPL5	P26321	297 aa	Known RBP	0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 83.8 ms