RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W RPL35BP0CX85 120 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W GCY1P14065 312 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
UBP1YDL122W RPB8P20436 146 aa1.83□□□□□ -2.12
UBP1YDL122W NTG1P31378 399 aa1.83□□□□□ -2.12
UBP1YDL122W ARN1P38731 627 aa1.83□□□□□ -2.12
UBP1YDL122W YER034WP40022 185 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W SAS2P40963 338 aa1.83□□□□□ -2.12
UBP1YDL122W MOB2P43563 287 aa1.83□□□□□ -2.12
UBP1YDL122W LIA1P47120 325 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W YJR154WP47181 346 aa1.83□□□□□ -2.12
UBP1YDL122W UBP8P50102 471 aa1.83□□□□□ -2.12
UBP1YDL122W LSC1P53598 329 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W YIF1P53845 314 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W CRZ1P53968 678 aa1.83□□□□□ -2.12
UBP1YDL122W SPP2Q02521 185 aa1.83□□□□□ -2.12
UBP1YDL122W YPL039WQ03080 316 aa1.83□□□□□ -2.12
UBP1YDL122W STE23Q06010 1027 aa1.83□□□□□ -2.12
UBP1YDL122W SEI1Q06058 285 aa1.83□□□□□ -2.12
UBP1YDL122W MUM3Q08750 479 aa1.83□□□□□ -2.12
UBP1YDL122W MHF1Q3E835 90 aa1.83□□□□□ -2.12
UBP1YDL122W RPL20AP0CX23 172 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W RPL20BP0CX24 172 aaPredicted RBP1.83□□□□□ -2.12
UBP1YDL122W ARF1P11076 181 aaKnown RBP1.83□□□□□ -2.12
UBP1YDL122W NAM2P11325 894 aa1.83□□□□□ -2.12
UBP1YDL122W BAR1P12630 587 aa1.83□□□□□ -2.12
UBP1YDL122W UGA1P17649 471 aa1.83□□□□□ -2.12
UBP1YDL122W HXT2P23585 541 aa1.83□□□□□ -2.12
UBP1YDL122W HMX1P32339 317 aa1.83□□□□□ -2.12
UBP1YDL122W TCA17P32613 152 aa1.83□□□□□ -2.12
UBP1YDL122W SNL1P40548 159 aa1.83□□□□□ -2.12
UBP1YDL122W IAH1P41734 238 aa1.83□□□□□ -2.12
UBP1YDL122W GCD14P46959 383 aaPredicted RBP1.83□□□□□ -2.12
UBP1YDL122W GTO1P48239 356 aa1.83□□□□□ -2.12
UBP1YDL122W VOA1P53262 265 aa1.83□□□□□ -2.12
UBP1YDL122W YNL260CP53846 198 aa1.83□□□□□ -2.12
UBP1YDL122W STD1Q02794 444 aa1.83□□□□□ -2.12
UBP1YDL122W SPO19Q03029 223 aa1.83□□□□□ -2.12
UBP1YDL122W CAB5Q03941 241 aa1.83□□□□□ -2.12
UBP1YDL122W ATC1Q04005 294 aa1.83□□□□□ -2.12
UBP1YDL122W YDR387CQ04162 555 aa1.83□□□□□ -2.12
UBP1YDL122W ARP10Q04549 284 aa1.83□□□□□ -2.12
UBP1YDL122W SWF1Q04629 336 aa1.83□□□□□ -2.12
UBP1YDL122W ARR1Q06596 294 aa1.83□□□□□ -2.12
UBP1YDL122W YAP7Q08182 245 aa1.83□□□□□ -2.12
UBP1YDL122W GRE1Q08969 168 aa1.83□□□□□ -2.12
UBP1YDL122W RPS23AP0CX29 145 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W RPS23BP0CX30 145 aa1.82□□□□□ -2.12
UBP1YDL122W TFS1P14306 219 aa1.82□□□□□ -2.12
UBP1YDL122W CBS2P14905 389 aa1.82□□□□□ -2.12
UBP1YDL122W SAR1P20606 190 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W GPI12P23797 304 aa1.82□□□□□ -2.12
UBP1YDL122W RAD57P25301 460 aa1.82□□□□□ -2.12
UBP1YDL122W SNC1P31109 117 aa1.82□□□□□ -2.12
UBP1YDL122W MDH3P32419 343 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
UBP1YDL122W APE2P32454 952 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W PRX1P34227 261 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W SPT10P35208 640 aa1.82□□□□□ -2.12
UBP1YDL122W ASK1P35734 292 aa1.82□□□□□ -2.12
UBP1YDL122W YKL070WP36087 169 aa1.82□□□□□ -2.12
UBP1YDL122W ALP1P38971 573 aa1.82□□□□□ -2.12
UBP1YDL122W YER079WP40052 210 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W PCP1P53259 346 aa1.82□□□□□ -2.12
UBP1YDL122W RRG8Q06109 277 aa1.82□□□□□ -2.12
UBP1YDL122W SSK1Q07084 712 aa1.82□□□□□ -2.12
UBP1YDL122W PRP11Q07350 266 aaPredicted RBP1.82□□□□□ -2.12
UBP1YDL122W DCP1Q12517 231 aaPredicted RBP1.82□□□□□ -2.12
UBP1YDL122W STE7P06784 515 aa1.82□□□□□ -2.12
UBP1YDL122W RAD10P06838 210 aa1.82□□□□□ -2.12
UBP1YDL122W DST1P07273 309 aa1.82□□□□□ -2.12
UBP1YDL122W UNG1P12887 359 aa1.82□□□□□ -2.12
UBP1YDL122W HNM1P19807 563 aa1.82□□□□□ -2.12
UBP1YDL122W SLM5P25345 492 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W RAD51P25454 400 aa1.82□□□□□ -2.12
UBP1YDL122W YRA2P36036 203 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
UBP1YDL122W RTT107P38850 1070 aa1.82□□□□□ -2.12
UBP1YDL122W YHR177WP38867 453 aa1.82□□□□□ -2.12
UBP1YDL122W RBG1P39729 369 aa1.82□□□□□ -2.12
UBP1YDL122W RFC4P40339 323 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W HXT9P40885 567 aa1.82□□□□□ -2.12
UBP1YDL122W TRS85P46944 698 aa1.82□□□□□ -2.12
UBP1YDL122W RIB4P50861 169 aaPredicted RBP1.82□□□□□ -2.12
UBP1YDL122W PKP2P53170 491 aa1.82□□□□□ -2.12
UBP1YDL122W DBP6P53734 629 aaKnown RBP1.82□□□□□ -2.12
UBP1YDL122W RHO4Q00246 291 aa1.82□□□□□ -2.12
UBP1YDL122W PET191Q02772 108 aa1.82□□□□□ -2.12
UBP1YDL122W YTH1Q06102 208 aaPredicted RBP1.82□□□□□ -2.12
UBP1YDL122W MRPL35Q06678 367 aa1.82□□□□□ -2.12
UBP1YDL122W REX4Q08237 289 aa1.82□□□□□ -2.12
UBP1YDL122W APC2Q12440 853 aa1.82□□□□□ -2.12
UBP1YDL122W RMD5Q12508 421 aa1.82□□□□□ -2.12
UBP1YDL122W RPN13O13563 156 aa1.81□□□□□ -2.12
UBP1YDL122W YLL053CP0CD98 152 aa1.81□□□□□ -2.12
UBP1YDL122W PAD1P33751 242 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
UBP1YDL122W STP2P38704 541 aa1.81□□□□□ -2.12
UBP1YDL122W PHO90P39535 881 aa1.81□□□□□ -2.12
UBP1YDL122W STE24P47154 453 aa1.81□□□□□ -2.12
UBP1YDL122W YGL185CP53100 379 aa1.81□□□□□ -2.12
UBP1YDL122W GPI1P53306 609 aa1.81□□□□□ -2.12
UBP1YDL122W EAF7P53911 425 aaKnown RBP1.81□□□□□ -2.12
UBP1YDL122W URC2Q04411 772 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms