RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W VBA1Q04301 562 aa2.36□□□□□ -2.03
MRPL40YPL173W API2Q04413 109 aa2.36□□□□□ -2.03
MRPL40YPL173W GMC2Q06201 188 aa2.36□□□□□ -2.03
MRPL40YPL173W GPN3Q06543 272 aa2.36□□□□□ -2.03
MRPL40YPL173W YOL085CQ99345 113 aa2.36□□□□□ -2.03
MRPL40YPL173W BI3Q9ZZW7 517 aa2.36□□□□□ -2.03
MRPL40YPL173W ADH1P00330 348 aaKnown RBP2.35□□□□□ -2.03
MRPL40YPL173W RSR1P13856 272 aa2.35□□□□□ -2.03
MRPL40YPL173W TFS1P14306 219 aa2.35□□□□□ -2.03
MRPL40YPL173W INO2P26798 304 aa2.35□□□□□ -2.03
MRPL40YPL173W COY1P34237 679 aa2.35□□□□□ -2.03
MRPL40YPL173W UTH1P36135 365 aa2.35□□□□□ -2.03
MRPL40YPL173W EFM1P38732 585 aa2.35□□□□□ -2.03
MRPL40YPL173W SMC2P38989 1170 aaKnown RBP2.35□□□□□ -2.03
MRPL40YPL173W COA1P40452 197 aa2.35□□□□□ -2.03
MRPL40YPL173W MRX5P47007 382 aa2.35□□□□□ -2.03
MRPL40YPL173W YJL118WP47022 219 aa2.35□□□□□ -2.03
MRPL40YPL173W TPN1P53099 579 aa2.35□□□□□ -2.03
MRPL40YPL173W HAL1Q01766 294 aa2.35□□□□□ -2.03
MRPL40YPL173W RPL21AQ02753 160 aaKnown RBP2.35□□□□□ -2.03
MRPL40YPL173W GMC1Q04399 608 aa2.35□□□□□ -2.03
MRPL40YPL173W POM33Q12164 279 aa2.35□□□□□ -2.03
MRPL40YPL173W YPL245WQ12179 454 aaKnown RBP2.35□□□□□ -2.03
MRPL40YPL173W RAX2Q12465 1220 aa2.35□□□□□ -2.03
MRPL40YPL173W YPR064WQ12492 139 aa2.35□□□□□ -2.03
MRPL40YPL173W RPP0P05317 312 aaKnown RBP2.34□□□□□ -2.03
MRPL40YPL173W MSF1P08425 469 aa2.34□□□□□ -2.03
MRPL40YPL173W MRPL6P32904 214 aa2.34□□□□□ -2.03
MRPL40YPL173W SPT4P32914 102 aaPredicted RBP2.34□□□□□ -2.03
MRPL40YPL173W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
MRPL40YPL173W RFT1P38206 574 aaPredicted RBP2.34□□□□□ -2.03
MRPL40YPL173W YGL262WP53054 175 aa2.34□□□□□ -2.03
MRPL40YPL173W TIM11P81449 96 aaPredicted RBP2.34□□□□□ -2.03
MRPL40YPL173W YMR209CQ03648 457 aa2.34□□□□□ -2.03
MRPL40YPL173W VHS1Q03785 461 aa2.34□□□□□ -2.03
MRPL40YPL173W PEX30Q06169 523 aa2.34□□□□□ -2.03
MRPL40YPL173W CTS2Q06350 511 aa2.34□□□□□ -2.03
MRPL40YPL173W YOR292CQ08743 309 aa2.34□□□□□ -2.03
MRPL40YPL173W YOR114WQ12219 294 aa2.34□□□□□ -2.03
MRPL40YPL173W YOL107WQ12239 342 aa2.34□□□□□ -2.03
MRPL40YPL173W FOL3Q12676 427 aaPredicted RBP2.34□□□□□ -2.03
MRPL40YPL173W YBL111CQ3E7Y5 667 aa2.34□□□□□ -2.03
MRPL40YPL173W LAG2Q92325 660 aa2.34□□□□□ -2.03
MRPL40YPL173W SSK22P25390 1331 aaPredicted RBP2.34□□□□□ -2.04
MRPL40YPL173W ILV1P00927 576 aaKnown RBP2.33□□□□□ -2.04
MRPL40YPL173W CBP6P07253 162 aaPredicted RBP2.33□□□□□ -2.04
MRPL40YPL173W SPS19P32573 292 aaKnown RBP2.33□□□□□ -2.04
MRPL40YPL173W SKG6P32900 734 aaPredicted RBP2.33□□□□□ -2.04
MRPL40YPL173W MBA1P38300 278 aa2.33□□□□□ -2.04
MRPL40YPL173W NPT1P39683 429 aaKnown RBP2.33□□□□□ -2.04
MRPL40YPL173W RRT13P40042 185 aa2.33□□□□□ -2.04
MRPL40YPL173W IBA57P47158 497 aa2.33□□□□□ -2.04
MRPL40YPL173W NUP84P52891 726 aa2.33□□□□□ -2.04
MRPL40YPL173W FMP48P53233 369 aa2.33□□□□□ -2.04
MRPL40YPL173W CPD1P53314 239 aa2.33□□□□□ -2.04
MRPL40YPL173W YNL134CP53912 376 aaKnown RBP2.33□□□□□ -2.04
MRPL40YPL173W YMR244WQ04018 355 aa2.33□□□□□ -2.04
MRPL40YPL173W SEC13Q04491 297 aaKnown RBP2.33□□□□□ -2.04
MRPL40YPL173W DPP1Q05521 289 aa2.33□□□□□ -2.04
MRPL40YPL173W YLR173WQ06247 608 aa2.33□□□□□ -2.04
MRPL40YPL173W PIN3Q06449 215 aa2.33□□□□□ -2.04
MRPL40YPL173W LOA1Q06508 300 aa2.33□□□□□ -2.04
MRPL40YPL173W ARV1Q06541 321 aa2.33□□□□□ -2.04
MRPL40YPL173W YOL029CQ08187 201 aa2.33□□□□□ -2.04
MRPL40YPL173W TY3A-GQ12173 290 aa2.33□□□□□ -2.04
MRPL40YPL173W YAL067W-AQ8TGK6 75 aa2.33□□□□□ -2.04
MRPL40YPL173W TY3A-IQ99219 290 aa2.33□□□□□ -2.04
MRPL40YPL173W SOD1P00445 154 aaKnown RBP2.32□□□□□ -2.04
MRPL40YPL173W TPI1P00942 248 aaKnown RBP2.32□□□□□ -2.04
MRPL40YPL173W PET494P07390 489 aaPredicted RBP2.32□□□□□ -2.04
MRPL40YPL173W ASP3-2P0CX77 362 aa2.32□□□□□ -2.04
MRPL40YPL173W ASP3-3P0CX78 362 aa2.32□□□□□ -2.04
MRPL40YPL173W ASP3-4P0CX79 362 aa2.32□□□□□ -2.04
MRPL40YPL173W ASP3-1P0CZ17 362 aa2.32□□□□□ -2.04
MRPL40YPL173W MET16P18408 261 aaPredicted RBP2.32□□□□□ -2.04
MRPL40YPL173W EPT1P22140 391 aa2.32□□□□□ -2.04
MRPL40YPL173W IFM1P25038 676 aa2.32□□□□□ -2.04
MRPL40YPL173W YCR025CP25352 136 aa2.32□□□□□ -2.04
MRPL40YPL173W RRT12P25381 491 aa2.32□□□□□ -2.04
MRPL40YPL173W POF1P25576 258 aa2.32□□□□□ -2.04
MRPL40YPL173W CWP1P28319 239 aa2.32□□□□□ -2.04
MRPL40YPL173W AEP1P32493 518 aa2.32□□□□□ -2.04
MRPL40YPL173W DBP7P36120 742 aaKnown RBP2.32□□□□□ -2.04
MRPL40YPL173W TDA11P38854 504 aa2.32□□□□□ -2.04
MRPL40YPL173W YIA6P40556 373 aa2.32□□□□□ -2.04
MRPL40YPL173W AGX1P43567 385 aa2.32□□□□□ -2.04
MRPL40YPL173W VEL1P53058 206 aa2.32□□□□□ -2.04
MRPL40YPL173W RNY1Q02933 434 aaKnown RBP2.32□□□□□ -2.04
MRPL40YPL173W TIR4Q12218 487 aaPredicted RBP2.32□□□□□ -2.04
MRPL40YPL173W RRP42Q12277 265 aaPredicted RBP2.32□□□□□ -2.04
MRPL40YPL173W DAL81P21657 970 aa2.31□□□□□ -2.04
MRPL40YPL173W ATG15P25641 520 aa2.31□□□□□ -2.04
MRPL40YPL173W SUA5P32579 426 aa2.31□□□□□ -2.04
MRPL40YPL173W CDC13P32797 924 aaKnown RBP2.31□□□□□ -2.04
MRPL40YPL173W ZRT3P34240 503 aa2.31□□□□□ -2.04
MRPL40YPL173W FRM2P37261 193 aa2.31□□□□□ -2.04
MRPL40YPL173W ATG12P38316 186 aa2.31□□□□□ -2.04
MRPL40YPL173W HSM3P38348 480 aa2.31□□□□□ -2.04
MRPL40YPL173W PEX31P53203 462 aa2.31□□□□□ -2.04
MRPL40YPL173W KTR6P54070 446 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 112.7 ms