RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W GPX2P38143 162 aa3.44□□□□□ -1.86
ROD1YOR018W PTH1P38876 190 aaKnown RBP3.44□□□□□ -1.86
ROD1YOR018W MDV1P47025 714 aa3.44□□□□□ -1.86
ROD1YOR018W ATG4P53867 494 aa3.44□□□□□ -1.86
ROD1YOR018W YDR102CQ03864 110 aa3.44□□□□□ -1.86
ROD1YOR018W HLR1Q04429 423 aa3.44□□□□□ -1.86
ROD1YOR018W ASR1Q06834 288 aa3.44□□□□□ -1.86
ROD1YOR018W NOP12Q08208 459 aaKnown RBP3.44□□□□□ -1.86
ROD1YOR018W PEX27Q08580 376 aa3.44□□□□□ -1.86
ROD1YOR018W RAX1Q08760 435 aa3.44□□□□□ -1.86
ROD1YOR018W AKR2Q12013 749 aa3.44□□□□□ -1.86
ROD1YOR018W YDL109CQ12103 647 aa3.44□□□□□ -1.86
ROD1YOR018W ACF2Q12168 779 aa3.44□□□□□ -1.86
ROD1YOR018W HER1Q12276 1246 aa3.44□□□□□ -1.86
ROD1YOR018W PNS1Q12412 539 aa3.44□□□□□ -1.86
ROD1YOR018W NFT1P0CE68 1218 aa3.43□□□□□ -1.86
ROD1YOR018W STE12P13574 688 aa3.43□□□□□ -1.86
ROD1YOR018W STE18P18852 110 aa3.43□□□□□ -1.86
ROD1YOR018W IDP1P21954 428 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W MTC7P32633 139 aa3.43□□□□□ -1.86
ROD1YOR018W YKR015CP36111 568 aa3.43□□□□□ -1.86
ROD1YOR018W MIT1P40002 666 aa3.43□□□□□ -1.86
ROD1YOR018W PCL6P40038 420 aa3.43□□□□□ -1.86
ROD1YOR018W HXT9P40885 567 aa3.43□□□□□ -1.86
ROD1YOR018W NIT2P47016 307 aa3.43□□□□□ -1.86
ROD1YOR018W EXG2P52911 562 aa3.43□□□□□ -1.86
ROD1YOR018W RAI1P53063 387 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W YGL235WP53071 178 aa3.43□□□□□ -1.86
ROD1YOR018W YGR012WP53206 393 aa3.43□□□□□ -1.86
ROD1YOR018W IMO32P53219 342 aa3.43□□□□□ -1.86
ROD1YOR018W VOA1P53262 265 aa3.43□□□□□ -1.86
ROD1YOR018W HXT11P54862 567 aa3.43□□□□□ -1.86
ROD1YOR018W RSM24Q03976 319 aa3.43□□□□□ -1.86
ROD1YOR018W ATG38Q05789 226 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W YLR040CQ07988 224 aa3.43□□□□□ -1.86
ROD1YOR018W YOR343CQ12484 108 aa3.43□□□□□ -1.86
ROD1YOR018W RPS13P05756 151 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W DPM1P14020 267 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W PRP28P23394 588 aa3.43□□□□□ -1.86
ROD1YOR018W BOS1P25385 244 aa3.43□□□□□ -1.86
ROD1YOR018W CMK1P27466 446 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W PAD1P33751 242 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
ROD1YOR018W ZRT3P34240 503 aa3.43□□□□□ -1.86
ROD1YOR018W UTP11P34247 250 aaPredicted RBP3.43□□□□□ -1.86
ROD1YOR018W PEX32P38292 413 aa3.43□□□□□ -1.86
ROD1YOR018W RIX1P38883 763 aaPredicted RBP3.43□□□□□ -1.86
ROD1YOR018W SHO1P40073 367 aa3.43□□□□□ -1.86
ROD1YOR018W GPP2P40106 250 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W POP1P41812 875 aa3.43□□□□□ -1.86
ROD1YOR018W IRC6P43615 237 aa3.43□□□□□ -1.86
ROD1YOR018W PGU1P47180 361 aa3.43□□□□□ -1.86
ROD1YOR018W ASK10P48361 1146 aa3.43□□□□□ -1.86
ROD1YOR018W RMD9P53140 646 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W NQM1P53228 333 aaPredicted RBP3.43□□□□□ -1.86
ROD1YOR018W YDR209CQ03480 137 aa3.43□□□□□ -1.86
ROD1YOR018W MSS11Q03825 758 aa3.43□□□□□ -1.86
ROD1YOR018W SNO4Q04902 237 aa3.43□□□□□ -1.86
ROD1YOR018W ENB1Q08299 606 aa3.43□□□□□ -1.86
ROD1YOR018W THI72Q08579 599 aa3.43□□□□□ -1.86
ROD1YOR018W HSP33Q08914 237 aaKnown RBP3.43□□□□□ -1.86
ROD1YOR018W FMP40Q08968 688 aaPredicted RBP3.43□□□□□ -1.86
ROD1YOR018W HSP32Q08992 237 aa3.43□□□□□ -1.86
ROD1YOR018W YOR289WQ12012 251 aaPredicted RBP3.43□□□□□ -1.86
ROD1YOR018W YPT1P01123 206 aaKnown RBP3.42□□□□□ -1.86
ROD1YOR018W OPI3P05375 206 aa3.42□□□□□ -1.86
ROD1YOR018W PDE2P06776 526 aa3.42□□□□□ -1.86
ROD1YOR018W CDC26P14724 124 aa3.42□□□□□ -1.86
ROD1YOR018W MDH2P22133 377 aa3.42□□□□□ -1.86
ROD1YOR018W SNC1P31109 117 aa3.42□□□□□ -1.86
ROD1YOR018W TPO5P36029 618 aa3.42□□□□□ -1.86
ROD1YOR018W JEN1P36035 616 aa3.42□□□□□ -1.86
ROD1YOR018W FET3P38993 636 aa3.42□□□□□ -1.86
ROD1YOR018W IRC5P43610 853 aa3.42□□□□□ -1.86
ROD1YOR018W SFH5P47008 294 aa3.42□□□□□ -1.86
ROD1YOR018W YGR126WP53274 230 aa3.42□□□□□ -1.86
ROD1YOR018W FDC1Q03034 503 aa3.42□□□□□ -1.86
ROD1YOR018W GPI17Q04080 534 aa3.42□□□□□ -1.86
ROD1YOR018W FMP42Q04991 504 aa3.42□□□□□ -1.86
ROD1YOR018W SNT309Q06091 175 aaPredicted RBP3.42□□□□□ -1.86
ROD1YOR018W YPR127WQ06494 345 aa3.42□□□□□ -1.86
ROD1YOR018W SYO1Q07395 620 aa3.42□□□□□ -1.86
ROD1YOR018W TIR4Q12218 487 aaPredicted RBP3.42□□□□□ -1.86
ROD1YOR018W YEL009C-AA0A023PZF2 135 aa3.42□□□□□ -1.86
ROD1YOR018W SOD2P00447 233 aa3.42□□□□□ -1.86
ROD1YOR018W SGA1P08019 549 aa3.42□□□□□ -1.86
ROD1YOR018W GCD1P09032 578 aaPredicted RBP3.42□□□□□ -1.86
ROD1YOR018W RPS18AP0CX55 146 aaKnown RBP3.42□□□□□ -1.86
ROD1YOR018W RPS18BP0CX56 146 aaPredicted RBP3.42□□□□□ -1.86
ROD1YOR018W RPD3P32561 433 aa3.42□□□□□ -1.86
ROD1YOR018W YPK3P38070 525 aa3.42□□□□□ -1.86
ROD1YOR018W THI2P38141 450 aa3.42□□□□□ -1.86
ROD1YOR018W YJL193WP39542 402 aa3.42□□□□□ -1.86
ROD1YOR018W YIL166CP40445 542 aa3.42□□□□□ -1.86
ROD1YOR018W YJL218WP40892 196 aaKnown RBP3.42□□□□□ -1.86
ROD1YOR018W CWC23P52868 283 aaPredicted RBP3.42□□□□□ -1.86
ROD1YOR018W YGL260WP53056 76 aa3.42□□□□□ -1.86
ROD1YOR018W MPP6P53725 186 aaPredicted RBP3.42□□□□□ -1.86
ROD1YOR018W CPR8P53728 308 aa3.42□□□□□ -1.86
ROD1YOR018W MRP51Q02950 344 aa3.42□□□□□ -1.86
ROD1YOR018W CGI121Q03705 181 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms