RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	ATG8	P38182	117 aa	RIP-Chip data	3.73	□□□□□ -1.81	not detected
ATG2	YNL242W	SHG1	P38337	142 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YIL161W	P40449	235 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	COQ5	P49017	307 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	NBP35	P52920	328 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	RMD9	P53140	646 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	YNR061C	P53747	219 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	NIS1	P53939	407 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	RHO4	Q00246	291 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	TPP1	Q03796	238 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	RRP45	Q05636	305 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	YFH1	Q07540	174 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	ATG41	Q12048	136 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	PCL9	Q12477	304 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	MEX67	Q99257	599 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	TDH1	P00360	332 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	ARF2	P19146	181 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	YCL002C	P25565	263 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	COQ2	P32378	372 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	ECT1	P33412	323 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	MAL32	P38158	584 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	AIM46	P38885	310 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YJL193W	P39542	402 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	UIP3	P39547	235 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	KTR7	P40504	517 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	DOC1	P53068	250 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YGR042W	P53227	271 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	MAL12	P53341	584 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	TGL2	P54857	326 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	YPL067C	Q02754	198 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	CTK1	Q03957	528 aa	Known RBP	3.73	□□□□□ -1.81
ATG2	YNL242W	SPR28	Q04921	423 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	ANT1	Q06497	328 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	NDJ1	Q12366	352 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	MHT1	Q12525	324 aa		3.73	□□□□□ -1.81
ATG2	YNL242W	LEU4	P06208	619 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	MET3	P08536	511 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	TY1A-H	P0C2I4	478 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	MTF1	P14908	341 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	MGR1	P25573	417 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
ATG2	YNL242W	FLR1	P38124	548 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	RAD55	P38953	406 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	GCV3	P39726	170 aa	Predicted RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	AGX1	P43567	385 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	ERV14	P53173	138 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	YKR011C	Q02209	353 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	PKR1	Q03880	122 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	ECM22	Q05958	814 aa	Predicted RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	IPK1	Q06667	281 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	PDA1	P16387	420 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	SNF6	P18888	332 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	CBP4	P37267	147 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	SKN7	P38889	622 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	PRE6	P40303	254 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	EXG2	P52911	562 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	COS10	P52924	374 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	KXD1	P53158	218 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	YPL108W	Q02872	168 aa	Predicted RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	ODC1	Q03028	310 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	SPC19	Q03954	165 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	ATX2	Q12067	313 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	YCL012C	Q8J0M4	134 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	YKR104W	P0CE69	306 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	TFS1	P14306	219 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	MRPL9	P31334	269 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	TCA17	P32613	152 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	EMC5	P40540	141 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	VMA21	P41806	77 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	IRC7	P43623	340 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	SKO1	Q02100	647 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	RRI1	Q12468	440 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	RPL25	P04456	142 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	SPT3	P06844	337 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	ADK1	P07170	222 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	MET8	P15807	274 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	HOP1	P20050	605 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	DLD2	P46681	530 aa	Known RBP	3.72	□□□□□ -1.81
ATG2	YNL242W	YGL114W	P53134	725 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	HST3	P53687	447 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	YHM2	Q04013	314 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	CAC2	Q04199	468 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	CIA1	Q05583	330 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	SRO7	Q12038	1033 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	YLR046C	Q12253	270 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	VMA9	Q3E7B6	73 aa		3.72	□□□□□ -1.81
ATG2	YNL242W	CAR2	P07991	424 aa	Known RBP	3.71	□□□□□ -1.81
ATG2	YNL242W	SEC62	P21825	274 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	BOS1	P25385	244 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	MSK1	P32048	576 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	PAN3	P36102	679 aa	Predicted RBP	3.71	□□□□□ -1.81
ATG2	YNL242W	HMT1	P38074	348 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	MUP1	P50276	574 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	PDR16	P53860	351 aa	Known RBP	3.71	□□□□□ -1.81
ATG2	YNL242W	TY1A-DR2	Q03964	440 aa	Known RBP	3.71	□□□□□ -1.81
ATG2	YNL242W	TY1A-MR1	Q04215	440 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	GMC1	Q04399	608 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	YMR321C	Q04898	105 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	YPR109W	Q06104	294 aa		3.71	□□□□□ -1.81
ATG2	YNL242W	YPL257W	Q08974	193 aa		3.71	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms