RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W DAL81P21657 970 aa2.94□□□□□ -1.94
SSU72YNL222W APA2P22108 325 aa2.94□□□□□ -1.94
SSU72YNL222W DPB2P24482 689 aaPredicted RBP2.94□□□□□ -1.94
SSU72YNL222W PMT2P31382 759 aa2.94□□□□□ -1.94
SSU72YNL222W SHE1P38200 338 aa2.94□□□□□ -1.94
SSU72YNL222W YAP3P38749 330 aa2.94□□□□□ -1.94
SSU72YNL222W YHR182WP38870 785 aa2.94□□□□□ -1.94
SSU72YNL222W EGD2P38879 174 aaKnown RBP2.94□□□□□ -1.94
SSU72YNL222W SUR2P38992 349 aa2.94□□□□□ -1.94
SSU72YNL222W SCC4P40090 624 aa2.94□□□□□ -1.94
SSU72YNL222W STB1P42845 420 aa2.94□□□□□ -1.94
SSU72YNL222W YJR054WP47114 497 aa2.94□□□□□ -1.94
SSU72YNL222W YJR056CP47115 236 aa2.94□□□□□ -1.94
SSU72YNL222W LIF1P53150 421 aa2.94□□□□□ -1.94
SSU72YNL222W RCF2P53721 224 aa2.94□□□□□ -1.94
SSU72YNL222W PGA2P53903 129 aa2.94□□□□□ -1.94
SSU72YNL222W YPR195CQ06594 109 aa2.94□□□□□ -1.94
SSU72YNL222W VAC14Q06708 880 aa2.94□□□□□ -1.94
SSU72YNL222W SHS1Q07657 551 aa2.94□□□□□ -1.94
SSU72YNL222W RPN8Q08723 338 aaKnown RBP2.94□□□□□ -1.94
SSU72YNL222W DAS2Q12084 232 aa2.94□□□□□ -1.94
SSU72YNL222W REP1P03871 373 aa2.93□□□□□ -1.94
SSU72YNL222W YAK1P14680 807 aa2.93□□□□□ -1.94
SSU72YNL222W OSM1P21375 501 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W MIR1P23641 311 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W YCR101CP25607 182 aa2.93□□□□□ -1.94
SSU72YNL222W YCR016WP25617 290 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W VMA6P32366 345 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W YDR089WP38966 869 aa2.93□□□□□ -1.94
SSU72YNL222W GDI1P39958 451 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W CIN5P40917 295 aa2.93□□□□□ -1.94
SSU72YNL222W UFE1P41834 346 aa2.93□□□□□ -1.94
SSU72YNL222W LSM1P47017 172 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W RBL2P48606 106 aaKnown RBP2.93□□□□□ -1.94
SSU72YNL222W SLX9P53251 210 aaPredicted RBP2.93□□□□□ -1.94
SSU72YNL222W PRM1P53835 661 aa2.93□□□□□ -1.94
SSU72YNL222W IGO1P53897 168 aa2.93□□□□□ -1.94
SSU72YNL222W DCR2Q05924 578 aa2.93□□□□□ -1.94
SSU72YNL222W SPH1Q06160 661 aa2.93□□□□□ -1.94
SSU72YNL222W DDC1Q08949 612 aa2.93□□□□□ -1.94
SSU72YNL222W MATALPHA2P0CY08 210 aa2.92□□□□□ -1.94
SSU72YNL222W HMLALPHA2P0CY09 210 aa2.92□□□□□ -1.94
SSU72YNL222W TAL1P15019 335 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W SPS19P32573 292 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W YBL010CP32788 280 aa2.92□□□□□ -1.94
SSU72YNL222W MRPL37P36532 105 aa2.92□□□□□ -1.94
SSU72YNL222W ADH5P38113 351 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W RFT1P38206 574 aaPredicted RBP2.92□□□□□ -1.94
SSU72YNL222W SHE3P38272 425 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W LIN1P38852 340 aaPredicted RBP2.92□□□□□ -1.94
SSU72YNL222W GIM4P40005 111 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W FCY21P40039 528 aa2.92□□□□□ -1.94
SSU72YNL222W UTP25P40498 721 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W ICE2P40499 491 aa2.92□□□□□ -1.94
SSU72YNL222W YIL001WP40560 513 aa2.92□□□□□ -1.94
SSU72YNL222W GLG2P47011 380 aa2.92□□□□□ -1.94
SSU72YNL222W AIM23P47015 356 aa2.92□□□□□ -1.94
SSU72YNL222W ILM1P47155 203 aa2.92□□□□□ -1.94
SSU72YNL222W EOS1P53938 366 aa2.92□□□□□ -1.94
SSU72YNL222W COX20Q04935 205 aa2.92□□□□□ -1.94
SSU72YNL222W GAS2Q06135 555 aa2.92□□□□□ -1.94
SSU72YNL222W BCP1Q06338 283 aa2.92□□□□□ -1.94
SSU72YNL222W DXO1Q06349 442 aa2.92□□□□□ -1.94
SSU72YNL222W SDO1Q07953 250 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W BBP1Q12365 385 aa2.92□□□□□ -1.94
SSU72YNL222W NCB2Q92317 146 aa2.92□□□□□ -1.94
SSU72YNL222W DET1Q99288 334 aaKnown RBP2.92□□□□□ -1.94
SSU72YNL222W YOR338WQ99326 363 aa2.92□□□□□ -1.94
SSU72YNL222W TY1B-DR4Q07793 1604 aa2.92□□□□□ -1.94
SSU72YNL222W TRM3Q07527 1436 aa2.92□□□□□ -1.94
SSU72YNL222W RAD7P06779 565 aa2.91□□□□□ -1.94
SSU72YNL222W SSA3P09435 649 aaKnown RBP2.91□□□□□ -1.94
SSU72YNL222W RPL35AP0CX84 120 aaKnown RBP2.91□□□□□ -1.94
SSU72YNL222W RPL35BP0CX85 120 aaKnown RBP2.91□□□□□ -1.94
SSU72YNL222W SUA5P32579 426 aa2.91□□□□□ -1.94
SSU72YNL222W COT1P32798 439 aa2.91□□□□□ -1.94
SSU72YNL222W CYM1P32898 989 aa2.91□□□□□ -1.94
SSU72YNL222W HMT1P38074 348 aa2.91□□□□□ -1.94
SSU72YNL222W GRE3P38715 327 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SSU72YNL222W RTR1P40084 226 aaPredicted RBP2.91□□□□□ -1.94
SSU72YNL222W SLM1P40485 686 aa2.91□□□□□ -1.94
SSU72YNL222W YIL089WP40500 205 aa2.91□□□□□ -1.94
SSU72YNL222W GTO1P48239 356 aa2.91□□□□□ -1.94
SSU72YNL222W PDR16P53860 351 aaKnown RBP2.91□□□□□ -1.94
SSU72YNL222W YDC1Q02896 317 aa2.91□□□□□ -1.94
SSU72YNL222W GTO3Q04806 366 aa2.91□□□□□ -1.94
SSU72YNL222W SPO77Q06134 477 aa2.91□□□□□ -1.94
SSU72YNL222W YPR078CQ06813 372 aa2.91□□□□□ -1.94
SSU72YNL222W YLL007CQ07799 665 aa2.91□□□□□ -1.94
SSU72YNL222W PML1Q07930 204 aaPredicted RBP2.91□□□□□ -1.94
SSU72YNL222W IES3Q12345 250 aa2.91□□□□□ -1.94
SSU72YNL222W YAL067W-AQ8TGK6 75 aa2.91□□□□□ -1.94
SSU72YNL222W NUP157P40064 1391 aaKnown RBP2.9□□□□□ -1.94
SSU72YNL222W AUS1Q08409 1394 aa2.9□□□□□ -1.94
SSU72YNL222W GAL7P08431 366 aa2.9□□□□□ -1.95
SSU72YNL222W ATP7P30902 174 aa2.9□□□□□ -1.95
SSU72YNL222W SRB2P34162 210 aa2.9□□□□□ -1.95
SSU72YNL222W MYO3P36006 1272 aa2.9□□□□□ -1.95
SSU72YNL222W DBP7P36120 742 aaKnown RBP2.9□□□□□ -1.95
SSU72YNL222W SSH1P38353 490 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms