RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeast

Gene LST8, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LST8	YNL006W	KRE29	P40026	464 aa		4.98	□□□□□ -1.61
LST8	YNL006W	XBP1	P40489	647 aa		4.98	□□□□□ -1.61
LST8	YNL006W	BNA2	P47125	453 aa		4.98	□□□□□ -1.61
LST8	YNL006W	BAT2	P47176	376 aa	Known RBP	4.98	□□□□□ -1.61
LST8	YNL006W	MSY1	P48527	492 aa		4.98	□□□□□ -1.61
LST8	YNL006W	BRR6	P53062	197 aa		4.98	□□□□□ -1.61
LST8	YNL006W	YPL039W	Q03080	316 aa		4.98	□□□□□ -1.61
LST8	YNL006W	TSR2	Q06672	205 aa	Known RBP	4.98	□□□□□ -1.61
LST8	YNL006W	MED7	Q08278	222 aa		4.98	□□□□□ -1.61
LST8	YNL006W	SPC3	Q12133	184 aa		4.98	□□□□□ -1.61
LST8	YNL006W	YOR343C	Q12484	108 aa		4.98	□□□□□ -1.61
LST8	YNL006W	SFG1	Q12507	346 aa		4.98	□□□□□ -1.61
LST8	YNL006W	Q0142	Q9ZZW4	58 aa		4.98	□□□□□ -1.61
LST8	YNL006W	YAL064W-B	O13512	126 aa		4.97	□□□□□ -1.61
LST8	YNL006W	CAR2	P07991	424 aa	Known RBP	4.97	□□□□□ -1.61
LST8	YNL006W	SPS100	P13130	326 aa		4.97	□□□□□ -1.61
LST8	YNL006W	AIM17	P23180	465 aa	Known RBP	4.97	□□□□□ -1.61
LST8	YNL006W	MCM10	P32354	571 aa		4.97	□□□□□ -1.61
LST8	YNL006W	AST1	P35183	429 aa		4.97	□□□□□ -1.61
LST8	YNL006W	ECM15	P35195	104 aa		4.97	□□□□□ -1.61
LST8	YNL006W	JEN1	P36035	616 aa		4.97	□□□□□ -1.61
LST8	YNL006W	CTF8	P38877	133 aa		4.97	□□□□□ -1.61
LST8	YNL006W	BNA1	P47096	177 aa		4.97	□□□□□ -1.61
LST8	YNL006W	ADO1	P47143	340 aa	Known RBP	4.97	□□□□□ -1.61
LST8	YNL006W	MKC7	P53379	596 aa		4.97	□□□□□ -1.61
LST8	YNL006W	MRP51	Q02950	344 aa		4.97	□□□□□ -1.61
LST8	YNL006W	DML1	Q03652	475 aa		4.97	□□□□□ -1.61
LST8	YNL006W	API2	Q04413	109 aa		4.97	□□□□□ -1.61
LST8	YNL006W	SYO1	Q07395	620 aa		4.97	□□□□□ -1.61
LST8	YNL006W	IRC19	Q07843	230 aa		4.97	□□□□□ -1.61
LST8	YNL006W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
LST8	YNL006W	RCN2	Q12044	265 aa		4.97	□□□□□ -1.61
LST8	YNL006W	HMS1	Q12398	434 aa		4.97	□□□□□ -1.61
LST8	YNL006W	CYC7	P00045	113 aa		4.96	□□□□□ -1.62
LST8	YNL006W	RHO1	P06780	209 aa	Known RBP	4.96	□□□□□ -1.62
LST8	YNL006W	TFS1	P14306	219 aa		4.96	□□□□□ -1.62
LST8	YNL006W	UTR1	P21373	530 aa		4.96	□□□□□ -1.62
LST8	YNL006W	RPI1	P23250	407 aa	Known RBP	4.96	□□□□□ -1.62
LST8	YNL006W	CLB4	P24871	460 aa		4.96	□□□□□ -1.62
LST8	YNL006W	ATG15	P25641	520 aa		4.96	□□□□□ -1.62
LST8	YNL006W	SNC1	P31109	117 aa		4.96	□□□□□ -1.62
LST8	YNL006W	SLM4	P38247	162 aa		4.96	□□□□□ -1.62
LST8	YNL006W	SPO73	P40031	143 aa		4.96	□□□□□ -1.62
LST8	YNL006W	AGP3	P43548	558 aa		4.96	□□□□□ -1.62
LST8	YNL006W	YFL051C	P43552	160 aa		4.96	□□□□□ -1.62
LST8	YNL006W	FMP33	P46998	180 aa		4.96	□□□□□ -1.62
LST8	YNL006W	YGL235W	P53071	178 aa		4.96	□□□□□ -1.62
LST8	YNL006W	MPP6	P53725	186 aa	Predicted RBP	4.96	□□□□□ -1.62
LST8	YNL006W	ASI1	P54074	624 aa		4.96	□□□□□ -1.62
LST8	YNL006W	KAP120	Q02932	1032 aa		4.96	□□□□□ -1.62
LST8	YNL006W	YDR102C	Q03864	110 aa		4.96	□□□□□ -1.62
LST8	YNL006W	SEC13	Q04491	297 aa	Known RBP	4.96	□□□□□ -1.62
LST8	YNL006W	VBA4	Q04602	768 aa	Known RBP	4.96	□□□□□ -1.62
LST8	YNL006W	YPR127W	Q06494	345 aa		4.96	□□□□□ -1.62
LST8	YNL006W	COQ10	Q08058	207 aa		4.96	□□□□□ -1.62
LST8	YNL006W	YPL191C	Q08930	360 aa		4.96	□□□□□ -1.62
LST8	YNL006W	BPH1	P25356	2167 aa		4.95	□□□□□ -1.62
LST8	YNL006W	HEM4	P06174	275 aa		4.95	□□□□□ -1.62
LST8	YNL006W	PRP28	P23394	588 aa		4.95	□□□□□ -1.62
LST8	YNL006W	PPA2	P28239	310 aa		4.95	□□□□□ -1.62
LST8	YNL006W	APE2	P32454	952 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	SLC1	P33333	303 aa		4.95	□□□□□ -1.62
LST8	YNL006W	YBR063C	P38083	404 aa		4.95	□□□□□ -1.62
LST8	YNL006W	AIM3	P38266	947 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	FET3	P38993	636 aa		4.95	□□□□□ -1.62
LST8	YNL006W	HIS6	P40545	261 aa		4.95	□□□□□ -1.62
LST8	YNL006W	GPI8	P49018	411 aa		4.95	□□□□□ -1.62
LST8	YNL006W	YGR168C	P53293	376 aa		4.95	□□□□□ -1.62
LST8	YNL006W	COS1	P53822	381 aa		4.95	□□□□□ -1.62
LST8	YNL006W	YMR099C	Q03161	297 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	SCS7	Q03529	384 aa		4.95	□□□□□ -1.62
LST8	YNL006W	SPC19	Q03954	165 aa		4.95	□□□□□ -1.62
LST8	YNL006W	HMO1	Q03973	246 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	SNO4	Q04902	237 aa		4.95	□□□□□ -1.62
LST8	YNL006W	YMR226C	Q05016	267 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	YPR147C	Q06522	304 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	LOT6	Q07923	191 aa		4.95	□□□□□ -1.62
LST8	YNL006W	HSP33	Q08914	237 aa	Known RBP	4.95	□□□□□ -1.62
LST8	YNL006W	HSP32	Q08992	237 aa		4.95	□□□□□ -1.62
LST8	YNL006W	VIK1	Q12045	647 aa		4.95	□□□□□ -1.62
LST8	YNL006W	MED2	Q12124	431 aa		4.95	□□□□□ -1.62
LST8	YNL006W	CYC1	P00044	109 aa	Predicted RBP	4.94	□□□□□ -1.62
LST8	YNL006W	NUP1	P20676	1076 aa		4.94	□□□□□ -1.62
LST8	YNL006W	GAS1	P22146	559 aa	Known RBP	4.94	□□□□□ -1.62
LST8	YNL006W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
LST8	YNL006W	CYS4	P32582	507 aa	Known RBP	4.94	□□□□□ -1.62
LST8	YNL006W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
LST8	YNL006W	TRS65	P32893	560 aa		4.94	□□□□□ -1.62
LST8	YNL006W	MRPL6	P32904	214 aa		4.94	□□□□□ -1.62
LST8	YNL006W	SOF1	P33750	489 aa	Known RBP	4.94	□□□□□ -1.62
LST8	YNL006W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
LST8	YNL006W	MTR2	P34232	184 aa	Known RBP	4.94	□□□□□ -1.62
LST8	YNL006W	YKL071W	P36086	256 aa		4.94	□□□□□ -1.62
LST8	YNL006W	MRPL39	P36533	70 aa		4.94	□□□□□ -1.62
LST8	YNL006W	SEN34	P39707	275 aa		4.94	□□□□□ -1.62
LST8	YNL006W	YIL166C	P40445	542 aa		4.94	□□□□□ -1.62
LST8	YNL006W	YRB2	P40517	327 aa		4.94	□□□□□ -1.62
LST8	YNL006W	STB1	P42845	420 aa		4.94	□□□□□ -1.62
LST8	YNL006W	YDR239C	Q03780	787 aa		4.94	□□□□□ -1.62
LST8	YNL006W	RAF1	Q06891	181 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms