RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	TAD2	P47058	250 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	MLC1	P53141	149 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	YGR168C	P53293	376 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	YGR266W	P53326	701 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	PXR1	P53335	271 aa	Predicted RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	ERV29	P53337	310 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	IRC4	Q03036	179 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	TVP15	Q03860	143 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	YMR244W	Q04018	355 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	GRH1	Q04410	372 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	DBP9	Q06218	594 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	UAF30	Q08747	228 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	YPL264C	Q08980	353 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	PRM4	Q12498	284 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	MHT1	Q12525	324 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	DET1	Q99288	334 aa	Known RBP	0.21	□□□□□ -2.38
RCO1	YMR075W	ISN1	Q99312	450 aa		0.21	□□□□□ -2.38
RCO1	YMR075W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
RCO1	YMR075W	ILV1	P00927	576 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	YOL162W	P0CF19	215 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SPS100	P13130	326 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	MXR2	P25566	168 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	CIN8	P27895	1000 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	VPH2	P32341	215 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YEL043W	P32618	956 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	TPO5	P36029	618 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SWD2	P36104	329 aa	Predicted RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	MRPL3	P36516	390 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	NRG2	P38082	220 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	IML3	P38265	245 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SSH1	P38353	490 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	MMS21	P38632	267 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	ALP1	P38971	573 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SMC2	P38989	1170 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	END3	P39013	349 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YHB1	P39676	399 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	LSM5	P40089	93 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	YFL040W	P43562	540 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SLX9	P53251	210 aa	Predicted RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	ARP5	P53946	755 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	ASI3	P53983	676 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SUR7	P54003	302 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	RCF1	Q03713	159 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	RDL2	Q08742	149 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	YDR018C	Q12185	396 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	EMC6	Q12431	108 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YPR064W	Q12492	139 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SFG1	Q12507	346 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	PGA3	Q12746	312 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	SPT7	P35177	1332 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	TFS1	P14306	219 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	UBA1	P22515	1024 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	RDS1	P25611	832 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	ERG2	P32352	222 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	TOA2	P32774	122 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	BUD2	P33314	1104 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	COY1	P34237	679 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
RCO1	YMR075W	TRM7	P38238	310 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	YHL044W	P38727	235 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	FET3	P38993	636 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	LCP5	P40079	357 aa	Predicted RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	UTP25	P40498	721 aa	Known RBP	0.2	□□□□□ -2.38
RCO1	YMR075W	EFM4	P40516	257 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YJL118W	P47022	219 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	COX16	P47081	118 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	TIM21	P53220	239 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YNR066C	P53752	436 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YNR068C	P53754	272 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SLM2	P53955	656 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	MRS2	Q01926	470 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YMR166C	Q03829	368 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	SNX41	Q04053	625 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	VPS20	Q04272	221 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	CSM3	Q04659	317 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	YDR222W	Q04925	415 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	TAF9	Q05027	157 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	GPN3	Q06543	272 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	TAF10	Q12030	206 aa		0.2	□□□□□ -2.38
RCO1	YMR075W	PAN1	P32521	1480 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	RPL26A	P05743	127 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	FBA1	P14540	359 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	SAR1	P20606	190 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	GRR1	P24814	1151 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	CWP1	P28319	239 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	RNP1	P32385	249 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	VPH1	P32563	840 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	SFC1	P33303	322 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	MAL32	P38158	584 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	PEX32	P38292	413 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	LIN1	P38852	340 aa	Predicted RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	YHR177W	P38867	453 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	SUR2	P38992	349 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	SEN34	P39707	275 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	LSM4	P40070	187 aa	Known RBP	0.19	□□□□□ -2.38
RCO1	YMR075W	RRG9	P40156	214 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	PEP8	P40335	379 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	SYS1	P41544	203 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	NIF3	P53081	288 aa		0.19	□□□□□ -2.38
RCO1	YMR075W	RPL26B	P53221	127 aa	Known RBP	0.19	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms