RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C HMT1P38074 348 aa3.25□□□□□ -1.89
USB1YLR132C MOB2P43563 287 aa3.25□□□□□ -1.89
USB1YLR132C YPS5P53057 165 aa3.25□□□□□ -1.89
USB1YLR132C HCH1P53834 153 aa3.25□□□□□ -1.89
USB1YLR132C VAC7P53950 1165 aa3.25□□□□□ -1.89
USB1YLR132C MRPS16Q02608 121 aa3.25□□□□□ -1.89
USB1YLR132C YDR115WQ04598 105 aa3.25□□□□□ -1.89
USB1YLR132C CSM3Q04659 317 aa3.25□□□□□ -1.89
USB1YLR132C REX3Q12090 404 aa3.25□□□□□ -1.89
USB1YLR132C RPL21BQ12672 160 aaKnown RBP3.25□□□□□ -1.89
USB1YLR132C CDC37P06101 506 aaKnown RBP3.24□□□□□ -1.89
USB1YLR132C DCC1P25559 380 aa3.24□□□□□ -1.89
USB1YLR132C URA10P30402 227 aa3.24□□□□□ -1.89
USB1YLR132C MID2P36027 376 aa3.24□□□□□ -1.89
USB1YLR132C YKL071WP36086 256 aa3.24□□□□□ -1.89
USB1YLR132C END3P39013 349 aa3.24□□□□□ -1.89
USB1YLR132C FIS1P40515 155 aa3.24□□□□□ -1.89
USB1YLR132C YGL262WP53054 175 aa3.24□□□□□ -1.89
USB1YLR132C VHT1P53241 593 aa3.24□□□□□ -1.89
USB1YLR132C TPS1Q00764 495 aaKnown RBP3.24□□□□□ -1.89
USB1YLR132C TRM82Q03774 444 aa3.24□□□□□ -1.89
USB1YLR132C VHS1Q03785 461 aa3.24□□□□□ -1.89
USB1YLR132C RVB1Q03940 463 aaKnown RBP3.24□□□□□ -1.89
USB1YLR132C YLR297WQ05899 129 aa3.24□□□□□ -1.89
USB1YLR132C RAD50P12753 1312 aa3.23□□□□□ -1.89
USB1YLR132C RAD1P06777 1100 aa3.23□□□□□ -1.89
USB1YLR132C PET18P25362 215 aa3.23□□□□□ -1.89
USB1YLR132C ACB1P31787 87 aa3.23□□□□□ -1.89
USB1YLR132C MMS21P38632 267 aa3.23□□□□□ -1.89
USB1YLR132C SSO2P39926 295 aa3.23□□□□□ -1.89
USB1YLR132C NAS6P50086 228 aa3.23□□□□□ -1.89
USB1YLR132C TSA2Q04120 196 aa3.23□□□□□ -1.89
USB1YLR132C SLF1Q12034 447 aaKnown RBP3.23□□□□□ -1.89
USB1YLR132C SRO7Q12038 1033 aa3.23□□□□□ -1.89
USB1YLR132C FRE8Q12209 686 aa3.23□□□□□ -1.89
USB1YLR132C MCT1Q12283 360 aa3.23□□□□□ -1.89
USB1YLR132C ILV1P00927 576 aaKnown RBP3.22□□□□□ -1.89
USB1YLR132C SUR1P33300 382 aa3.22□□□□□ -1.89
USB1YLR132C MRP21P38175 177 aa3.22□□□□□ -1.89
USB1YLR132C MED6P38782 295 aa3.22□□□□□ -1.89
USB1YLR132C YDR089WP38966 869 aa3.22□□□□□ -1.89
USB1YLR132C GAA1P39012 614 aa3.22□□□□□ -1.89
USB1YLR132C OSW5P40219 148 aa3.22□□□□□ -1.89
USB1YLR132C STB1P42845 420 aa3.22□□□□□ -1.89
USB1YLR132C TAF6P53040 516 aa3.22□□□□□ -1.89
USB1YLR132C LSG1P53145 640 aaKnown RBP3.22□□□□□ -1.89
USB1YLR132C CDH1P53197 566 aa3.22□□□□□ -1.89
USB1YLR132C YGR168CP53293 376 aa3.22□□□□□ -1.89
USB1YLR132C DDC1Q08949 612 aa3.22□□□□□ -1.89
USB1YLR132C MDY2Q12285 212 aa3.22□□□□□ -1.89
USB1YLR132C CBP6P07253 162 aaPredicted RBP3.21□□□□□ -1.9
USB1YLR132C RPL18AP0CX49 186 aaKnown RBP3.21□□□□□ -1.9
USB1YLR132C RPL18BP0CX50 186 aaKnown RBP3.21□□□□□ -1.9
USB1YLR132C GCD2P12754 651 aaPredicted RBP3.21□□□□□ -1.9
USB1YLR132C CTA1P15202 515 aa3.21□□□□□ -1.9
USB1YLR132C MEI5P32489 222 aa3.21□□□□□ -1.9
USB1YLR132C TOA1P32773 286 aa3.21□□□□□ -1.9
USB1YLR132C MRPS9P38120 278 aa3.21□□□□□ -1.9
USB1YLR132C MRX3P38172 270 aa3.21□□□□□ -1.9
USB1YLR132C RCK2P38623 610 aa3.21□□□□□ -1.9
USB1YLR132C FHL1P39521 936 aa3.21□□□□□ -1.9
USB1YLR132C UTP25P40498 721 aaKnown RBP3.21□□□□□ -1.9
USB1YLR132C BIO3P50277 480 aa3.21□□□□□ -1.9
USB1YLR132C VEL1P53058 206 aa3.21□□□□□ -1.9
USB1YLR132C YGR015CP53208 328 aa3.21□□□□□ -1.9
USB1YLR132C RPL21AQ02753 160 aaKnown RBP3.21□□□□□ -1.9
USB1YLR132C VPS20Q04272 221 aa3.21□□□□□ -1.9
USB1YLR132C SMD2Q06217 110 aaKnown RBP3.21□□□□□ -1.9
USB1YLR132C CBP2P03874 630 aaPredicted RBP3.2□□□□□ -1.9
USB1YLR132C EPT1P22140 391 aa3.2□□□□□ -1.9
USB1YLR132C PMT2P31382 759 aa3.2□□□□□ -1.9
USB1YLR132C SHE3P38272 425 aaKnown RBP3.2□□□□□ -1.9
USB1YLR132C HIT1P46973 164 aa3.2□□□□□ -1.9
USB1YLR132C YJR054WP47114 497 aa3.2□□□□□ -1.9
USB1YLR132C PXR1P53335 271 aaPredicted RBP3.2□□□□□ -1.9
USB1YLR132C NRM1P53718 249 aa3.2□□□□□ -1.9
USB1YLR132C ALG11P53954 548 aaKnown RBP3.2□□□□□ -1.9
USB1YLR132C SUR7P54003 302 aa3.2□□□□□ -1.9
USB1YLR132C CAB5Q03941 241 aa3.2□□□□□ -1.9
USB1YLR132C NKP2Q06162 153 aa3.2□□□□□ -1.9
USB1YLR132C IES4Q08561 116 aa3.2□□□□□ -1.9
USB1YLR132C STE2D6VTK4 431 aa3.19□□□□□ -1.9
USB1YLR132C YPS1P32329 569 aa3.19□□□□□ -1.9
USB1YLR132C COT1P32798 439 aa3.19□□□□□ -1.9
USB1YLR132C SKG6P32900 734 aaPredicted RBP3.19□□□□□ -1.9
USB1YLR132C KTI12P34253 313 aaKnown RBP3.19□□□□□ -1.9
USB1YLR132C ECM34P38728 170 aa3.19□□□□□ -1.9
USB1YLR132C EFM1P38732 585 aa3.19□□□□□ -1.9
USB1YLR132C HEM14P40012 539 aa3.19□□□□□ -1.9
USB1YLR132C AIM20P40451 204 aa3.19□□□□□ -1.9
USB1YLR132C YCH1P42937 148 aa3.19□□□□□ -1.9
USB1YLR132C YFR018CP43599 363 aa3.19□□□□□ -1.9
USB1YLR132C SEH1P53011 349 aaKnown RBP3.19□□□□□ -1.9
USB1YLR132C MRX11Q03079 207 aa3.19□□□□□ -1.9
USB1YLR132C ECM11Q04110 302 aa3.19□□□□□ -1.9
USB1YLR132C YPQ1Q12010 308 aa3.19□□□□□ -1.9
USB1YLR132C VPS63O13549 108 aa3.18□□□□□ -1.9
USB1YLR132C SOD1P00445 154 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C TCP1P12612 559 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C BGL2P15703 313 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms