RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W RBS1Q05672 457 aaKnown RBP6.77□□□□□ -1.33
SNF7YLR025W SNT309Q06091 175 aaPredicted RBP6.77□□□□□ -1.33
SNF7YLR025W ASR1Q06834 288 aa6.77□□□□□ -1.33
SNF7YLR025W GUP2Q08929 609 aa6.77□□□□□ -1.33
SNF7YLR025W BAG7Q12128 409 aa6.77□□□□□ -1.33
SNF7YLR025W DET1Q99288 334 aaKnown RBP6.77□□□□□ -1.33
SNF7YLR025W CCH1P50077 2039 aa6.76□□□□□ -1.33
SNF7YLR025W CAN1P04817 590 aa6.76□□□□□ -1.33
SNF7YLR025W PET54P10834 293 aa6.76□□□□□ -1.33
SNF7YLR025W HOM2P13663 365 aaKnown RBP6.76□□□□□ -1.33
SNF7YLR025W PDA1P16387 420 aaKnown RBP6.76□□□□□ -1.33
SNF7YLR025W NAM9P27929 486 aa6.76□□□□□ -1.33
SNF7YLR025W YMC1P32331 307 aa6.76□□□□□ -1.33
SNF7YLR025W DOA4P32571 926 aa6.76□□□□□ -1.33
SNF7YLR025W VPS17P32913 551 aa6.76□□□□□ -1.33
SNF7YLR025W SRX1P36077 127 aa6.76□□□□□ -1.33
SNF7YLR025W IFA38P38286 347 aa6.76□□□□□ -1.33
SNF7YLR025W HRB1P38922 454 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
SNF7YLR025W YEL068CP39977 110 aa6.76□□□□□ -1.33
SNF7YLR025W FMP52P40008 231 aa6.76□□□□□ -1.33
SNF7YLR025W RFC4P40339 323 aaKnown RBP6.76□□□□□ -1.33
SNF7YLR025W ICE2P40499 491 aa6.76□□□□□ -1.33
SNF7YLR025W SMK1P41808 388 aa6.76□□□□□ -1.33
SNF7YLR025W BNA6P43619 295 aa6.76□□□□□ -1.33
SNF7YLR025W AIM25P47140 327 aa6.76□□□□□ -1.33
SNF7YLR025W PMT5P52867 743 aa6.76□□□□□ -1.33
SNF7YLR025W ART5P53244 586 aaKnown RBP6.76□□□□□ -1.33
SNF7YLR025W GIM3P53900 129 aa6.76□□□□□ -1.33
SNF7YLR025W CDA2Q06703 312 aa6.76□□□□□ -1.33
SNF7YLR025W YNG1Q08465 219 aa6.76□□□□□ -1.33
SNF7YLR025W YOR289WQ12012 251 aaPredicted RBP6.76□□□□□ -1.33
SNF7YLR025W HBN1Q96VH4 193 aa6.76□□□□□ -1.33
SNF7YLR025W DFG16Q99234 619 aa6.76□□□□□ -1.33
SNF7YLR025W MEX67Q99257 599 aaKnown RBP6.76□□□□□ -1.33
SNF7YLR025W HIS3P06633 220 aa6.75□□□□□ -1.33
SNF7YLR025W SEN2P16658 377 aa6.75□□□□□ -1.33
SNF7YLR025W BOS1P25385 244 aa6.75□□□□□ -1.33
SNF7YLR025W THI4P32318 326 aa6.75□□□□□ -1.33
SNF7YLR025W ANR2P36090 516 aaPredicted RBP6.75□□□□□ -1.33
SNF7YLR025W THI2P38141 450 aa6.75□□□□□ -1.33
SNF7YLR025W VBA2P38358 474 aaKnown RBP6.75□□□□□ -1.33
SNF7YLR025W FET3P38993 636 aa6.75□□□□□ -1.33
SNF7YLR025W NAB3P38996 802 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SNF7YLR025W VMA7P39111 118 aa6.75□□□□□ -1.33
SNF7YLR025W HIS6P40545 261 aa6.75□□□□□ -1.33
SNF7YLR025W RPE1P46969 238 aa6.75□□□□□ -1.33
SNF7YLR025W SNX4P47057 423 aa6.75□□□□□ -1.33
SNF7YLR025W ECL1P48235 211 aa6.75□□□□□ -1.33
SNF7YLR025W YNR062CP53748 327 aa6.75□□□□□ -1.33
SNF7YLR025W SEC13Q04491 297 aaKnown RBP6.75□□□□□ -1.33
SNF7YLR025W TPO3Q06451 622 aa6.75□□□□□ -1.33
SNF7YLR025W RAX1Q08760 435 aa6.75□□□□□ -1.33
SNF7YLR025W YOR365CQ08844 703 aa6.75□□□□□ -1.33
SNF7YLR025W FMP40Q08968 688 aaPredicted RBP6.75□□□□□ -1.33
SNF7YLR025W RDI1Q12434 202 aa6.75□□□□□ -1.33
SNF7YLR025W YGR161W-CQ3E744 92 aa6.75□□□□□ -1.33
SNF7YLR025W QCR7P00128 127 aa6.74□□□□□ -1.33
SNF7YLR025W STF2P16965 84 aa6.74□□□□□ -1.33
SNF7YLR025W RPA135P22138 1203 aaKnown RBP6.74□□□□□ -1.33
SNF7YLR025W RNA14P25298 677 aaKnown RBP6.74□□□□□ -1.33
SNF7YLR025W PUT3P25502 979 aaPredicted RBP6.74□□□□□ -1.33
SNF7YLR025W PRE4P30657 266 aa6.74□□□□□ -1.33
SNF7YLR025W PAU2P32612 120 aa6.74□□□□□ -1.33
SNF7YLR025W PDR3P33200 976 aa6.74□□□□□ -1.33
SNF7YLR025W SLC1P33333 303 aa6.74□□□□□ -1.33
SNF7YLR025W CHK1P38147 527 aa6.74□□□□□ -1.33
SNF7YLR025W PHM8P40025 321 aa6.74□□□□□ -1.33
SNF7YLR025W YER137CP40083 148 aaKnown RBP6.74□□□□□ -1.33
SNF7YLR025W SWM2P40342 146 aa6.74□□□□□ -1.33
SNF7YLR025W PAM16P42949 149 aa6.74□□□□□ -1.33
SNF7YLR025W ECM27P47144 725 aa6.74□□□□□ -1.33
SNF7YLR025W DOC1P53068 250 aa6.74□□□□□ -1.33
SNF7YLR025W SWS2P53937 143 aa6.74□□□□□ -1.33
SNF7YLR025W TIM11P81449 96 aaPredicted RBP6.74□□□□□ -1.33
SNF7YLR025W MSS11Q03825 758 aa6.74□□□□□ -1.33
SNF7YLR025W SMA2Q04658 369 aa6.74□□□□□ -1.33
SNF7YLR025W DCR2Q05924 578 aa6.74□□□□□ -1.33
SNF7YLR025W PHO92Q06390 306 aa6.74□□□□□ -1.33
SNF7YLR025W SSK1Q07084 712 aa6.74□□□□□ -1.33
SNF7YLR025W LUC7Q07508 261 aaPredicted RBP6.74□□□□□ -1.33
SNF7YLR025W AIM6Q07716 390 aa6.74□□□□□ -1.33
SNF7YLR025W FEX1Q08913 375 aa6.74□□□□□ -1.33
SNF7YLR025W ATG31Q12421 196 aa6.74□□□□□ -1.33
SNF7YLR025W FRE6Q12473 712 aa6.74□□□□□ -1.33
SNF7YLR025W PSF1Q12488 208 aa6.74□□□□□ -1.33
SNF7YLR025W YBR298C-AQ8TGK4 73 aa6.74□□□□□ -1.33
SNF7YLR025W VPS13Q07878 3144 aa6.73□□□□□ -1.33
SNF7YLR025W SOD2P00447 233 aa6.73□□□□□ -1.33
SNF7YLR025W CDC9P04819 755 aa6.73□□□□□ -1.33
SNF7YLR025W MRP1P10662 321 aaKnown RBP6.73□□□□□ -1.33
SNF7YLR025W CDC23P16522 626 aa6.73□□□□□ -1.33
SNF7YLR025W MAG1P22134 296 aaKnown RBP6.73□□□□□ -1.33
SNF7YLR025W FUN19P28003 413 aaPredicted RBP6.73□□□□□ -1.33
SNF7YLR025W PRE2P30656 287 aaKnown RBP6.73□□□□□ -1.33
SNF7YLR025W TIM12P32830 109 aa6.73□□□□□ -1.33
SNF7YLR025W NIC96P34077 839 aa6.73□□□□□ -1.33
SNF7YLR025W PEX32P38292 413 aa6.73□□□□□ -1.33
SNF7YLR025W PFS1P38872 237 aa6.73□□□□□ -1.33
SNF7YLR025W ALP1P38971 573 aa6.73□□□□□ -1.33
SNF7YLR025W MSS4P38994 779 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms