RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C BUD13P46947 266 aaPredicted RBP2.25□□□□□ -2.05
YPT52YKR014C OKP1P53298 406 aa2.25□□□□□ -2.05
YPT52YKR014C YNL050CP53952 270 aa2.25□□□□□ -2.05
YPT52YKR014C IRC4Q03036 179 aa2.25□□□□□ -2.05
YPT52YKR014C ERV41Q04651 352 aa2.25□□□□□ -2.05
YPT52YKR014C HRT1Q08273 121 aa2.25□□□□□ -2.05
YPT52YKR014C PRP46Q12417 451 aaPredicted RBP2.25□□□□□ -2.05
YPT52YKR014C PRM4Q12498 284 aa2.25□□□□□ -2.05
YPT52YKR014C REP1P03871 373 aa2.24□□□□□ -2.05
YPT52YKR014C GPI12P23797 304 aa2.24□□□□□ -2.05
YPT52YKR014C ECM14P38836 430 aa2.24□□□□□ -2.05
YPT52YKR014C PMT4P46971 762 aa2.24□□□□□ -2.05
YPT52YKR014C COX16P47081 118 aa2.24□□□□□ -2.05
YPT52YKR014C GTO1P48239 356 aa2.24□□□□□ -2.05
YPT52YKR014C YGL185CP53100 379 aa2.24□□□□□ -2.05
YPT52YKR014C SDS23P53172 527 aa2.24□□□□□ -2.05
YPT52YKR014C YGR266WP53326 701 aa2.24□□□□□ -2.05
YPT52YKR014C YNL260CP53846 198 aa2.24□□□□□ -2.05
YPT52YKR014C CSI1Q04368 295 aa2.24□□□□□ -2.05
YPT52YKR014C MRX9Q07349 420 aaKnown RBP2.24□□□□□ -2.05
YPT52YKR014C PBP4Q07362 185 aaKnown RBP2.24□□□□□ -2.05
YPT52YKR014C RDL2Q08742 149 aaKnown RBP2.24□□□□□ -2.05
YPT52YKR014C YPR063CQ12160 140 aa2.24□□□□□ -2.05
YPT52YKR014C SIA1Q12212 622 aa2.24□□□□□ -2.05
YPT52YKR014C RPS23AP0CX29 145 aaKnown RBP2.23□□□□□ -2.05
YPT52YKR014C RPS23BP0CX30 145 aa2.23□□□□□ -2.05
YPT52YKR014C MEK1P24719 497 aaPredicted RBP2.23□□□□□ -2.05
YPT52YKR014C CSM1P25651 190 aa2.23□□□□□ -2.05
YPT52YKR014C INO2P26798 304 aa2.23□□□□□ -2.05
YPT52YKR014C TKL2P33315 681 aa2.23□□□□□ -2.05
YPT52YKR014C YHR035WP38769 630 aa2.23□□□□□ -2.05
YPT52YKR014C MPP10P47083 593 aaKnown RBP2.23□□□□□ -2.05
YPT52YKR014C KEL2P50090 882 aa2.23□□□□□ -2.05
YPT52YKR014C MND1P53102 219 aa2.23□□□□□ -2.05
YPT52YKR014C TPC1P53257 314 aa2.23□□□□□ -2.05
YPT52YKR014C BIO4P53630 237 aa2.23□□□□□ -2.05
YPT52YKR014C YLR012CQ07927 99 aa2.23□□□□□ -2.05
YPT52YKR014C APC9Q12107 265 aa2.23□□□□□ -2.05
YPT52YKR014C YPL245WQ12179 454 aaKnown RBP2.23□□□□□ -2.05
YPT52YKR014C RRP36Q12481 300 aaPredicted RBP2.23□□□□□ -2.05
YPT52YKR014C SAL1D6W196 494 aa2.22□□□□□ -2.05
YPT52YKR014C SPS100P13130 326 aa2.22□□□□□ -2.05
YPT52YKR014C ERD1P16151 362 aa2.22□□□□□ -2.05
YPT52YKR014C RPB9P27999 122 aa2.22□□□□□ -2.05
YPT52YKR014C ICL1P28240 557 aaPredicted RBP2.22□□□□□ -2.05
YPT52YKR014C CSE1P33307 960 aa2.22□□□□□ -2.05
YPT52YKR014C YKL070WP36087 169 aa2.22□□□□□ -2.05
YPT52YKR014C SWD2P36104 329 aaPredicted RBP2.22□□□□□ -2.05
YPT52YKR014C ASP1P38986 381 aaPredicted RBP2.22□□□□□ -2.05
YPT52YKR014C YFL040WP43562 540 aa2.22□□□□□ -2.05
YPT52YKR014C EMC2P47133 292 aaKnown RBP2.22□□□□□ -2.05
YPT52YKR014C BCP1Q06338 283 aa2.22□□□□□ -2.05
YPT52YKR014C TFC7Q12415 435 aa2.22□□□□□ -2.05
YPT52YKR014C FMP16Q12497 93 aa2.22□□□□□ -2.05
YPT52YKR014C IZH4Q99393 312 aa2.22□□□□□ -2.05
YPT52YKR014C SSA3P09435 649 aaKnown RBP2.21□□□□□ -2.06
YPT52YKR014C MRPL20P22354 195 aaPredicted RBP2.21□□□□□ -2.06
YPT52YKR014C RPL16BP26785 198 aaKnown RBP2.21□□□□□ -2.06
YPT52YKR014C UTR5P32630 166 aa2.21□□□□□ -2.06
YPT52YKR014C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
YPT52YKR014C SNX41Q04053 625 aa2.21□□□□□ -2.06
YPT52YKR014C UTP23Q12339 254 aaKnown RBP2.21□□□□□ -2.06
YPT52YKR014C IES3Q12345 250 aa2.21□□□□□ -2.06
YPT52YKR014C TRM10Q12400 293 aa2.21□□□□□ -2.06
YPT52YKR014C ERP3Q12403 225 aa2.21□□□□□ -2.06
YPT52YKR014C ALK2P32789 676 aaPredicted RBP2.2□□□□□ -2.06
YPT52YKR014C MRPL37P36532 105 aa2.2□□□□□ -2.06
YPT52YKR014C HIS2P38635 335 aa2.2□□□□□ -2.06
YPT52YKR014C TDA11P38854 504 aa2.2□□□□□ -2.06
YPT52YKR014C YGL088WP53151 121 aa2.2□□□□□ -2.06
YPT52YKR014C SWC4P53201 476 aa2.2□□□□□ -2.06
YPT52YKR014C YDR114CQ04597 100 aa2.2□□□□□ -2.06
YPT52YKR014C BER1Q06688 274 aaKnown RBP2.2□□□□□ -2.06
YPT52YKR014C RLP24Q07915 199 aaKnown RBP2.2□□□□□ -2.06
YPT52YKR014C YPL264CQ08980 353 aa2.2□□□□□ -2.06
YPT52YKR014C ARO4P32449 370 aaKnown RBP2.19□□□□□ -2.06
YPT52YKR014C MED8P38304 223 aa2.19□□□□□ -2.06
YPT52YKR014C SOP4P39543 234 aaPredicted RBP2.19□□□□□ -2.06
YPT52YKR014C YIA6P40556 373 aa2.19□□□□□ -2.06
YPT52YKR014C AGP3P43548 558 aa2.19□□□□□ -2.06
YPT52YKR014C ECO1P43605 281 aa2.19□□□□□ -2.06
YPT52YKR014C HSH155P49955 971 aaKnown RBP2.19□□□□□ -2.06
YPT52YKR014C MPP6P53725 186 aaPredicted RBP2.19□□□□□ -2.06
YPT52YKR014C ASR1Q06834 288 aa2.19□□□□□ -2.06
YPT52YKR014C VIK1Q12045 647 aa2.19□□□□□ -2.06
YPT52YKR014C SGT2Q12118 346 aaKnown RBP2.19□□□□□ -2.06
YPT52YKR014C RRP42Q12277 265 aaPredicted RBP2.19□□□□□ -2.06
YPT52YKR014C ATP6P00854 259 aa2.18□□□□□ -2.06
YPT52YKR014C RPL31AP0C2H8 113 aaKnown RBP2.18□□□□□ -2.06
YPT52YKR014C FRS2P15625 503 aaKnown RBP2.18□□□□□ -2.06
YPT52YKR014C YSR3P23501 404 aa2.18□□□□□ -2.06
YPT52YKR014C MCH2P36032 473 aa2.18□□□□□ -2.06
YPT52YKR014C RPC37P36121 282 aa2.18□□□□□ -2.06
YPT52YKR014C PET8P38921 284 aa2.18□□□□□ -2.06
YPT52YKR014C RCY1P39531 840 aa2.18□□□□□ -2.06
YPT52YKR014C EDC2P40023 145 aaPredicted RBP2.18□□□□□ -2.06
YPT52YKR014C YFR045WP43617 309 aa2.18□□□□□ -2.06
YPT52YKR014C MRX5P47007 382 aa2.18□□□□□ -2.06
YPT52YKR014C YPL077CQ02831 240 aa2.18□□□□□ -2.06
YPT52YKR014C YPL113CQ02961 396 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms