RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W NHP6BP11633 99 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W YCL002CP25565 263 aa5.88□□□□□ -1.47
GEF1YJR040W YCR061WP25639 631 aa5.88□□□□□ -1.47
GEF1YJR040W SFC1P33303 322 aa5.88□□□□□ -1.47
GEF1YJR040W TMA19P35691 167 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W ASC1P38011 319 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W RFC4P40339 323 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W UTP25P40498 721 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W PKP1P40530 394 aa5.88□□□□□ -1.47
GEF1YJR040W PAM16P42949 149 aa5.88□□□□□ -1.47
GEF1YJR040W IRC7P43623 340 aa5.88□□□□□ -1.47
GEF1YJR040W OAZ1Q02803 292 aa5.88□□□□□ -1.47
GEF1YJR040W LRS4Q04087 347 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W YLR346CQ06139 101 aa5.88□□□□□ -1.47
GEF1YJR040W YLR446WQ06204 433 aa5.88□□□□□ -1.47
GEF1YJR040W SPC3Q12133 184 aa5.88□□□□□ -1.47
GEF1YJR040W YPR145C-AQ2V2P0 78 aa5.88□□□□□ -1.47
GEF1YJR040W SLH1P53327 1967 aaKnown RBP5.88□□□□□ -1.47
GEF1YJR040W SIR2P06700 562 aa5.87□□□□□ -1.47
GEF1YJR040W HTS1P07263 546 aaKnown RBP5.87□□□□□ -1.47
GEF1YJR040W MRPL44P19956 98 aa5.87□□□□□ -1.47
GEF1YJR040W ORC2P32833 620 aa5.87□□□□□ -1.47
GEF1YJR040W LOT5P34234 306 aa5.87□□□□□ -1.47
GEF1YJR040W KAE1P36132 386 aa5.87□□□□□ -1.47
GEF1YJR040W AIM3P38266 947 aaKnown RBP5.87□□□□□ -1.47
GEF1YJR040W WSC4P38739 605 aa5.87□□□□□ -1.47
GEF1YJR040W RTC3P38804 111 aaPredicted RBP5.87□□□□□ -1.47
GEF1YJR040W YHR177WP38867 453 aa5.87□□□□□ -1.47
GEF1YJR040W NOP16P40007 231 aaKnown RBP5.87□□□□□ -1.47
GEF1YJR040W TAX4P47030 604 aa5.87□□□□□ -1.47
GEF1YJR040W RHO3Q00245 231 aaKnown RBP5.87□□□□□ -1.47
GEF1YJR040W YLR173WQ06247 608 aa5.87□□□□□ -1.47
GEF1YJR040W TEN1Q07921 160 aa5.87□□□□□ -1.47
GEF1YJR040W YOR238WQ08634 303 aa5.87□□□□□ -1.47
GEF1YJR040W HBN1Q96VH4 193 aa5.87□□□□□ -1.47
GEF1YJR040W SCEIP03882 235 aa5.87□□□□□ -1.47
GEF1YJR040W SNF6P18888 332 aa5.87□□□□□ -1.47
GEF1YJR040W ADE1P27616 306 aa5.87□□□□□ -1.47
GEF1YJR040W MRP20P32387 263 aa5.87□□□□□ -1.47
GEF1YJR040W MGM101P32787 269 aaKnown RBP5.87□□□□□ -1.47
GEF1YJR040W SCO2P38072 301 aa5.87□□□□□ -1.47
GEF1YJR040W TRM7P38238 310 aaKnown RBP5.87□□□□□ -1.47
GEF1YJR040W AIM46P38885 310 aa5.87□□□□□ -1.47
GEF1YJR040W SWM2P40342 146 aa5.87□□□□□ -1.47
GEF1YJR040W PHO23P50947 330 aa5.87□□□□□ -1.47
GEF1YJR040W YGR079WP53249 370 aa5.87□□□□□ -1.47
GEF1YJR040W MSC1Q03104 513 aa5.87□□□□□ -1.47
GEF1YJR040W ROT1Q03691 256 aa5.87□□□□□ -1.47
GEF1YJR040W PUN1Q06991 263 aa5.87□□□□□ -1.47
GEF1YJR040W YPL066WQ12194 479 aa5.87□□□□□ -1.47
GEF1YJR040W RAS1P01119 309 aa5.86□□□□□ -1.47
GEF1YJR040W SPS4P09937 338 aa5.86□□□□□ -1.47
GEF1YJR040W YBR063CP38083 404 aa5.86□□□□□ -1.47
GEF1YJR040W AVT5P38176 459 aa5.86□□□□□ -1.47
GEF1YJR040W ATG8P38182 117 aaRIP-Chip data5.86□□□□□ -1.47not detected
GEF1YJR040W YHR122WP38829 231 aa5.86□□□□□ -1.47
GEF1YJR040W TIF34P40217 347 aaKnown RBP5.86□□□□□ -1.47
GEF1YJR040W CSL4P53859 292 aaPredicted RBP5.86□□□□□ -1.47
GEF1YJR040W SWS2P53937 143 aa5.86□□□□□ -1.47
GEF1YJR040W CAC2Q04199 468 aa5.86□□□□□ -1.47
GEF1YJR040W RNH202Q05635 350 aa5.86□□□□□ -1.47
GEF1YJR040W TMA10Q06177 86 aa5.86□□□□□ -1.47
GEF1YJR040W RDI1Q12434 202 aa5.86□□□□□ -1.47
GEF1YJR040W SSA3P09435 649 aaKnown RBP5.86□□□□□ -1.47
GEF1YJR040W TY2A-LR1P0C2J4 438 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-FP0CX61 438 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-GR2P0CX62 438 aa5.86□□□□□ -1.47
GEF1YJR040W NAM2P11325 894 aa5.86□□□□□ -1.47
GEF1YJR040W HNM1P19807 563 aa5.86□□□□□ -1.47
GEF1YJR040W STE50P25344 346 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-CP25383 438 aa5.86□□□□□ -1.47
GEF1YJR040W BUB3P26449 341 aa5.86□□□□□ -1.47
GEF1YJR040W SSH4P32343 579 aa5.86□□□□□ -1.47
GEF1YJR040W MKK1P32490 508 aa5.86□□□□□ -1.47
GEF1YJR040W ELF1P36053 145 aa5.86□□□□□ -1.47
GEF1YJR040W SHE1P38200 338 aa5.86□□□□□ -1.47
GEF1YJR040W ELO1P39540 310 aa5.86□□□□□ -1.47
GEF1YJR040W FAU1P40099 211 aa5.86□□□□□ -1.47
GEF1YJR040W PRM10P42946 383 aa5.86□□□□□ -1.47
GEF1YJR040W PAC10P48363 199 aa5.86□□□□□ -1.47
GEF1YJR040W PKP2P53170 491 aa5.86□□□□□ -1.47
GEF1YJR040W HCH1P53834 153 aa5.86□□□□□ -1.47
GEF1YJR040W ARG5,6Q01217 863 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-DR2Q03483 438 aa5.86□□□□□ -1.47
GEF1YJR040W ANT1Q06497 328 aa5.86□□□□□ -1.47
GEF1YJR040W XYL2Q07993 356 aa5.86□□□□□ -1.47
GEF1YJR040W RAD28Q12021 506 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-BQ12260 438 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-OR2Q12293 438 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-DR1Q12392 438 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-OR1Q12439 438 aa5.86□□□□□ -1.47
GEF1YJR040W TY2A-DR3Q99303 438 aa5.86□□□□□ -1.47
GEF1YJR040W RPB3P16370 318 aaKnown RBP5.85□□□□□ -1.47
GEF1YJR040W SLM5P25345 492 aaKnown RBP5.85□□□□□ -1.47
GEF1YJR040W PRE4P30657 266 aa5.85□□□□□ -1.47
GEF1YJR040W CDC12P32468 407 aaKnown RBP5.85□□□□□ -1.47
GEF1YJR040W HTD2P38790 280 aaKnown RBP5.85□□□□□ -1.47
GEF1YJR040W ALP1P38971 573 aa5.85□□□□□ -1.47
GEF1YJR040W YIL108WP40483 696 aaKnown RBP5.85□□□□□ -1.47
GEF1YJR040W MET28P40573 187 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms