RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	YGR015C	P53208	328 aa		3	□□□□□ -1.93
YPS6	YIR039C	YIF1	P53845	314 aa	Known RBP	3	□□□□□ -1.93
YPS6	YIR039C	YNL140C	P53910	189 aa		3	□□□□□ -1.93
YPS6	YIR039C	SAM50	P53969	484 aa		3	□□□□□ -1.93
YPS6	YIR039C	MSS11	Q03825	758 aa		3	□□□□□ -1.93
YPS6	YIR039C	YDR387C	Q04162	555 aa		3	□□□□□ -1.93
YPS6	YIR039C	IPK1	Q06667	281 aa		3	□□□□□ -1.93
YPS6	YIR039C	YLL007C	Q07799	665 aa		3	□□□□□ -1.93
YPS6	YIR039C	ATG10	Q07879	167 aa		3	□□□□□ -1.93
YPS6	YIR039C	RSA1	Q08932	381 aa		3	□□□□□ -1.93
YPS6	YIR039C	MHF2	Q3E829	80 aa		3	□□□□□ -1.93
YPS6	YIR039C	CBP2	P03874	630 aa	Predicted RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	ILV5	P06168	395 aa	Known RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	CBS2	P14905	389 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	RPI1	P23250	407 aa	Known RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	TRX3	P25372	127 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	RPL5	P26321	297 aa	Known RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	MEI5	P32489	222 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YPT52	P36018	234 aa	Known RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	YCR087C-A	P37263	153 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	TAE1	P38340	232 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YHR127W	P38833	243 aa	Known RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	MNL1	P38888	796 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YAL037W	P39728	267 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	THO1	P40040	218 aa	Known RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	PMT4	P46971	762 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YJR149W	P47177	404 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	MDM34	P53083	459 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	FLC3	P53121	802 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	RPL15B	P54780	204 aa	Predicted RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	GIP3	Q03016	1276 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YMR087W	Q04299	284 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	SNT309	Q06091	175 aa	Predicted RBP	2.99	□□□□□ -1.93
YPS6	YIR039C	ARR1	Q06596	294 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	GSH2	Q08220	491 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	VIK1	Q12045	647 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	IES3	Q12345	250 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YCL012C	Q8J0M4	134 aa		2.99	□□□□□ -1.93
YPS6	YIR039C	YPT1	P01123	206 aa	Known RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	NFT1	P0CE68	1218 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	GRR1	P24814	1151 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	RPS5	P26783	225 aa	Known RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	ACH1	P32316	526 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
YPS6	YIR039C	GDH2	P33327	1092 aa	Known RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	YKR015C	P36111	568 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	QDR3	P38227	689 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	IML3	P38265	245 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	RCK1	P38622	512 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	STP2	P38704	541 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	FLO5	P38894	1075 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	PCF11	P39081	626 aa	Predicted RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	MSS2	P40990	351 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	GCN20	P43535	752 aa	Known RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	BIO3	P50277	480 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	ERV25	P54837	211 aa	Known RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	SED5	Q01590	340 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	IRC15	Q02733	499 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	RSN1	Q03516	953 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	MFG1	Q07684	458 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	ATX2	Q12067	313 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	RRP42	Q12277	265 aa	Predicted RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	YLR126C	Q12288	251 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	WTM1	Q12363	437 aa	Known RBP	2.98	□□□□□ -1.93
YPS6	YIR039C	FAB1	P34756	2278 aa		2.98	□□□□□ -1.93
YPS6	YIR039C	RPL42A	P0CX27	106 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	RPL42B	P0CX28	106 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	FAR1	P21268	830 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	AIM17	P23180	465 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	VPS17	P32913	551 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	VPS21	P36017	210 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	SCO2	P38072	301 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	EGD2	P38879	174 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	GIM4	P40005	111 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	PCL6	P40038	420 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	PAC11	P40960	533 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	MPS2	P53159	387 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	PCP1	P53259	346 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	IMP4	P53941	290 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	GPI15	P53961	229 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	GRX5	Q02784	150 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	CCE1	Q03702	353 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	VHS1	Q03785	461 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	RIM13	Q03792	727 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	APC4	Q04601	652 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	YMR034C	Q05131	434 aa	Predicted RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	VPS74	Q06385	345 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	SYO1	Q07395	620 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	RPN8	Q08723	338 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	GLE1	Q12315	538 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	YDL199C	Q12407	687 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	STT4	P37297	1900 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	RPS14A	P06367	137 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	RPC40	P07703	335 aa	Known RBP	2.97	□□□□□ -1.93
YPS6	YIR039C	GAL3	P13045	520 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	KSS1	P14681	368 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	YSR3	P23501	404 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	MGR1	P25573	417 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	ITR2	P30606	609 aa		2.97	□□□□□ -1.93
YPS6	YIR039C	NUP2	P32499	720 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 529.7 ms