RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	EGT2	P42835	1041 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	NCA3	P46955	337 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	YJR142W	P47173	342 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	UBC13	P52490	153 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	RBG2	P53295	368 aa	Known RBP	3.22	□□□□□ -1.89
SGN1	YIR001C	SNF12	P53628	566 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	YNL181W	P53878	407 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
SGN1	YIR001C	RAD33	Q04231	177 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	MFG1	Q07684	458 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	MSA1	Q08471	629 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	RLM1	Q12224	676 aa		3.22	□□□□□ -1.89
SGN1	YIR001C	YER145C-A	A0A023PYF4	145 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	TPK2	P06245	380 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	MSI1	P13712	422 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	SPO7	P18410	259 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	EXO70	P19658	623 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	GFD2	P25370	566 aa	Known RBP	3.21	□□□□□ -1.9
SGN1	YIR001C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
SGN1	YIR001C	TIM12	P32830	109 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	MNS1	P32906	549 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	NUF2	P33895	451 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	YKL102C	P34249	101 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	YHR097C	P38809	366 aa	Known RBP	3.21	□□□□□ -1.9
SGN1	YIR001C	YNL195C	P40168	261 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	DPB11	P47027	764 aa	Predicted RBP	3.21	□□□□□ -1.9
SGN1	YIR001C	NUP57	P48837	541 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	BRR6	P53062	197 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	MTM1	P53320	366 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	SMX3	P54999	86 aa	Predicted RBP	3.21	□□□□□ -1.9
SGN1	YIR001C	SED1	Q01589	338 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	FMN1	Q03778	218 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	ASM4	Q05166	528 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	CTS2	Q06350	511 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	YPR147C	Q06522	304 aa	Known RBP	3.21	□□□□□ -1.9
SGN1	YIR001C	SYO1	Q07395	620 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	COQ10	Q08058	207 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	NSL1	Q12143	216 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	RDL1	Q12305	139 aa	Known RBP	3.21	□□□□□ -1.9
SGN1	YIR001C	SFM1	Q12314	213 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	RTN2	Q12443	393 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	YOR343C	Q12484	108 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	YHR214C-E	Q8TGK0	99 aa		3.21	□□□□□ -1.9
SGN1	YIR001C	THP2	O13539	261 aa	Known RBP	3.2	□□□□□ -1.9
SGN1	YIR001C	UGA1	P17649	471 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	YPK2	P18961	677 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	RPB8	P20436	146 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	CAM1	P29547	415 aa	Known RBP	3.2	□□□□□ -1.9
SGN1	YIR001C	TRS65	P32893	560 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	CLB6	P32943	380 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	JEN1	P36035	616 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	IST2	P38250	946 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	MTW1	P39731	289 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	TDA10	P42938	290 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	GCN20	P43535	752 aa	Known RBP	3.2	□□□□□ -1.9
SGN1	YIR001C	YIP4	P53093	235 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	MPC1	P53157	130 aa	Known RBP	3.2	□□□□□ -1.9
SGN1	YIR001C	COS1	P53822	381 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	HMO1	Q03973	246 aa	Known RBP	3.2	□□□□□ -1.9
SGN1	YIR001C	VPS36	Q06696	566 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	RRT8	Q08219	342 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	DIA2	Q08496	732 aa	Predicted RBP	3.2	□□□□□ -1.9
SGN1	YIR001C	FIT3	Q08907	204 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	ULA1	Q12059	462 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	ERP4	Q12450	207 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	YPT6	Q99260	215 aa		3.2	□□□□□ -1.9
SGN1	YIR001C	RAD7	P06779	565 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	YOL163W	P0CF20	169 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	URE2	P23202	354 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	CNA1	P23287	553 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	RER1	P25560	188 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	RPS5	P26783	225 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	ARP2	P32381	391 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	YBR138C	P38277	524 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	GDI1	P39958	451 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	ISC1	P40015	477 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	ATF1	P40353	525 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	SNM1	P40993	198 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	IRC7	P43623	340 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	YHC3	P47040	408 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	DIA3	P52290	468 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	SYF2	P53277	215 aa	Predicted RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	YNR062C	P53748	327 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	TPS1	Q00764	495 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	YPL077C	Q02831	240 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	PRM15	Q03262	622 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	YDR102C	Q03864	110 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	RIM9	Q04734	239 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	SFH1	Q06168	426 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	DBP9	Q06218	594 aa	Known RBP	3.19	□□□□□ -1.9
SGN1	YIR001C	YPR127W	Q06494	345 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	TAZ1	Q06510	381 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	CSI2	Q08054	341 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	YPR202W	Q08993	238 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	FRE8	Q12209	686 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	HMS1	Q12398	434 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	IZH2	Q12442	317 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	FSH3	Q99369	266 aa		3.19	□□□□□ -1.9
SGN1	YIR001C	RPN13	O13563	156 aa		3.18	□□□□□ -1.9
SGN1	YIR001C	ATP6	P00854	259 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms