RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W VNX1P42839 908 aa12.48□□□□□ -0.41
RPN10YHR200W SCS7Q03529 384 aa12.48□□□□□ -0.41
RPN10YHR200W GPI17Q04080 534 aa12.48□□□□□ -0.41
RPN10YHR200W NGL1Q08213 363 aaKnown RBP12.48□□□□□ -0.41
RPN10YHR200W RDL2Q08742 149 aaKnown RBP12.48□□□□□ -0.41
RPN10YHR200W SIR2P06700 562 aa12.47□□□□□ -0.41
RPN10YHR200W YFR010W-AP0C5N0 62 aa12.47□□□□□ -0.41
RPN10YHR200W SCO1P23833 295 aa12.47□□□□□ -0.41
RPN10YHR200W PUT3P25502 979 aaPredicted RBP12.47□□□□□ -0.41
RPN10YHR200W SHE2P36068 246 aaKnown RBP RIP-Chip data12.47□□□□□ -0.41not detected
RPN10YHR200W MRPL16P38064 232 aa12.47□□□□□ -0.41
RPN10YHR200W THI2P38141 450 aa12.47□□□□□ -0.41
RPN10YHR200W PAU24P38155 120 aa12.47□□□□□ -0.41
RPN10YHR200W ECO1P43605 281 aa12.47□□□□□ -0.41
RPN10YHR200W RPE1P46969 238 aa12.47□□□□□ -0.41
RPN10YHR200W IKS1P47042 667 aa12.47□□□□□ -0.41
RPN10YHR200W SCW11P53189 542 aa12.47□□□□□ -0.41
RPN10YHR200W MIX14Q04341 121 aa12.47□□□□□ -0.41
RPN10YHR200W RRP9Q06506 573 aaKnown RBP12.47□□□□□ -0.41
RPN10YHR200W YPR147CQ06522 304 aaKnown RBP12.47□□□□□ -0.41
RPN10YHR200W MDM32Q12171 622 aa12.47□□□□□ -0.41
RPN10YHR200W SWM1Q12379 170 aa12.47□□□□□ -0.41
RPN10YHR200W MSW1P04803 379 aa12.46□□□□□ -0.41
RPN10YHR200W CYT1P07143 309 aa12.46□□□□□ -0.41
RPN10YHR200W MBA1P38300 278 aa12.46□□□□□ -0.41
RPN10YHR200W SEC24P40482 926 aaKnown RBP12.46□□□□□ -0.41
RPN10YHR200W YDR209CQ03480 137 aa12.46□□□□□ -0.41
RPN10YHR200W YOR378WQ08902 515 aa12.46□□□□□ -0.41
RPN10YHR200W NUM1Q00402 2748 aa12.45□□□□□ -0.42
RPN10YHR200W NFT1P0CE68 1218 aa12.45□□□□□ -0.42
RPN10YHR200W DOA4P32571 926 aa12.45□□□□□ -0.42
RPN10YHR200W SRP102P36057 244 aaPredicted RBP12.45□□□□□ -0.42
RPN10YHR200W APD1P38281 316 aa12.45□□□□□ -0.42
RPN10YHR200W ATG18P43601 500 aa12.45□□□□□ -0.42
RPN10YHR200W IMD3P50095 523 aaKnown RBP12.45□□□□□ -0.42
RPN10YHR200W PPT1P53043 513 aa12.45□□□□□ -0.42
RPN10YHR200W BRR6P53062 197 aa12.45□□□□□ -0.42
RPN10YHR200W YAL064W-BO13512 126 aa12.44□□□□□ -0.42
RPN10YHR200W COX9P07255 59 aa12.44□□□□□ -0.42
RPN10YHR200W MRP1P10662 321 aaKnown RBP12.44□□□□□ -0.42
RPN10YHR200W PDR3P33200 976 aa12.44□□□□□ -0.42
RPN10YHR200W SHO1P40073 367 aa12.44□□□□□ -0.42
RPN10YHR200W PMT6P42934 759 aa12.44□□□□□ -0.42
RPN10YHR200W NIT2P47016 307 aa12.44□□□□□ -0.42
RPN10YHR200W YJL055WP47044 245 aa12.44□□□□□ -0.42
RPN10YHR200W YGR126WP53274 230 aa12.44□□□□□ -0.42
RPN10YHR200W SDC1Q03323 175 aa12.44□□□□□ -0.42
RPN10YHR200W BNA7Q04066 261 aa12.44□□□□□ -0.42
RPN10YHR200W NIP7Q08962 181 aaKnown RBP12.44□□□□□ -0.42
RPN10YHR200W YPL278CQ08990 100 aa12.44□□□□□ -0.42
RPN10YHR200W SPO7P18410 259 aa12.43□□□□□ -0.42
RPN10YHR200W UTR1P21373 530 aa12.43□□□□□ -0.42
RPN10YHR200W RPB10P22139 70 aa12.43□□□□□ -0.42
RPN10YHR200W SBA1P28707 216 aaKnown RBP12.43□□□□□ -0.42
RPN10YHR200W MTH1P35198 433 aa12.43□□□□□ -0.42
RPN10YHR200W CCZ1P38273 704 aa12.43□□□□□ -0.42
RPN10YHR200W SER2P42941 309 aa12.43□□□□□ -0.42
RPN10YHR200W CCC1P47818 322 aa12.43□□□□□ -0.42
RPN10YHR200W PMT5P52867 743 aa12.43□□□□□ -0.42
RPN10YHR200W GIS1Q03833 894 aa12.43□□□□□ -0.42
RPN10YHR200W MRX8Q05473 314 aa12.43□□□□□ -0.42
RPN10YHR200W RGC1Q06108 1083 aaKnown RBP12.43□□□□□ -0.42
RPN10YHR200W TSR2Q06672 205 aaKnown RBP12.43□□□□□ -0.42
RPN10YHR200W YLR099W-AQ3E798 87 aa12.43□□□□□ -0.42
RPN10YHR200W CSF1Q12150 2958 aa12.42□□□□□ -0.42
RPN10YHR200W RPA135P22138 1203 aaKnown RBP12.42□□□□□ -0.42
RPN10YHR200W NAS2P40555 220 aa12.42□□□□□ -0.42
RPN10YHR200W CWC23P52868 283 aaPredicted RBP12.42□□□□□ -0.42
RPN10YHR200W RAI1P53063 387 aaKnown RBP12.42□□□□□ -0.42
RPN10YHR200W SAY1P53324 424 aa12.42□□□□□ -0.42
RPN10YHR200W RVB1Q03940 463 aaKnown RBP12.42□□□□□ -0.42
RPN10YHR200W VBA4Q04602 768 aaKnown RBP12.42□□□□□ -0.42
RPN10YHR200W GRE1Q08969 168 aa12.42□□□□□ -0.42
RPN10YHR200W STE12P13574 688 aa12.41□□□□□ -0.42
RPN10YHR200W BOS1P25385 244 aa12.41□□□□□ -0.42
RPN10YHR200W MIM1Q08176 113 aa12.41□□□□□ -0.42
RPN10YHR200W CAM1P29547 415 aaKnown RBP12.4□□□□□ -0.42
RPN10YHR200W THI4P32318 326 aa12.4□□□□□ -0.42
RPN10YHR200W PAU2P32612 120 aa12.4□□□□□ -0.42
RPN10YHR200W KAE1P36132 386 aa12.4□□□□□ -0.42
RPN10YHR200W YBR137WP38276 179 aa12.4□□□□□ -0.42
RPN10YHR200W IPI1P38803 334 aaPredicted RBP12.4□□□□□ -0.42
RPN10YHR200W BPL1P48445 690 aaPredicted RBP12.4□□□□□ -0.42
RPN10YHR200W PBP1P53297 722 aaKnown RBP12.4□□□□□ -0.42
RPN10YHR200W SYC1Q08553 188 aaPredicted RBP12.4□□□□□ -0.42
RPN10YHR200W PEX27Q08580 376 aa12.4□□□□□ -0.42
RPN10YHR200W NOP56Q12460 504 aaKnown RBP RIP-Chip data12.4□□□□□ -0.42not detected
RPN10YHR200W KRR1P25586 316 aaPredicted RBP12.39□□□□□ -0.43
RPN10YHR200W SPT10P35208 640 aa12.39□□□□□ -0.43
RPN10YHR200W TMA19P35691 167 aaKnown RBP12.39□□□□□ -0.43
RPN10YHR200W ANR2P36090 516 aaPredicted RBP12.39□□□□□ -0.43
RPN10YHR200W MNN5P46982 586 aa12.39□□□□□ -0.43
RPN10YHR200W IMO32P53219 342 aa12.39□□□□□ -0.43
RPN10YHR200W YGR066CP53242 292 aa12.39□□□□□ -0.43
RPN10YHR200W RSM28Q03430 361 aa12.39□□□□□ -0.43
RPN10YHR200W RBS1Q05672 457 aaKnown RBP12.39□□□□□ -0.43
RPN10YHR200W NNT1Q05874 261 aa12.39□□□□□ -0.43
RPN10YHR200W YPR109WQ06104 294 aa12.39□□□□□ -0.43
RPN10YHR200W IRA1P18963 3092 aa12.39□□□□□ -0.43
RPN10YHR200W GCN4P03069 281 aa12.38□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 243.4 ms