RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W SRO7Q12038 1033 aa3.92□□□□□ -1.78
PMC1YGL006W LAA1P39526 2014 aa3.92□□□□□ -1.78
PMC1YGL006W TDH2P00358 332 aaKnown RBP3.92□□□□□ -1.78
PMC1YGL006W ATG15P25641 520 aa3.92□□□□□ -1.78
PMC1YGL006W PFA3P42836 336 aa3.92□□□□□ -1.78
PMC1YGL006W VNX1P42839 908 aa3.92□□□□□ -1.78
PMC1YGL006W NIT2P47016 307 aa3.92□□□□□ -1.78
PMC1YGL006W NUP57P48837 541 aa3.92□□□□□ -1.78
PMC1YGL006W TOS2P50078 622 aa3.92□□□□□ -1.78
PMC1YGL006W HCH1P53834 153 aa3.92□□□□□ -1.78
PMC1YGL006W ARR2Q06597 130 aa3.92□□□□□ -1.78
PMC1YGL006W YOR289WQ12012 251 aaPredicted RBP3.92□□□□□ -1.78
PMC1YGL006W YLR046CQ12253 270 aa3.92□□□□□ -1.78
PMC1YGL006W YPR145C-AQ2V2P0 78 aa3.92□□□□□ -1.78
PMC1YGL006W ODC2Q99297 307 aa3.92□□□□□ -1.78
PMC1YGL006W SGA1P08019 549 aa3.92□□□□□ -1.78
PMC1YGL006W RIP1P08067 215 aa3.92□□□□□ -1.78
PMC1YGL006W AFT1P22149 690 aa3.92□□□□□ -1.78
PMC1YGL006W CPR3P25719 182 aa3.92□□□□□ -1.78
PMC1YGL006W CNE1P27825 502 aa3.92□□□□□ -1.78
PMC1YGL006W MDL1P33310 695 aa3.92□□□□□ -1.78
PMC1YGL006W SGE1P33335 543 aa3.92□□□□□ -1.78
PMC1YGL006W MRPL16P38064 232 aa3.92□□□□□ -1.78
PMC1YGL006W RFC2P40348 353 aa3.92□□□□□ -1.78
PMC1YGL006W PKP2P53170 491 aa3.92□□□□□ -1.78
PMC1YGL006W MDM30Q05930 598 aa3.92□□□□□ -1.78
PMC1YGL006W HBN1Q96VH4 193 aa3.92□□□□□ -1.78
PMC1YGL006W MRP1P10662 321 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W SEC12P11655 471 aa3.91□□□□□ -1.78
PMC1YGL006W STE4P18851 423 aa3.91□□□□□ -1.78
PMC1YGL006W GEX1P25596 615 aa3.91□□□□□ -1.78
PMC1YGL006W COQ2P32378 372 aa3.91□□□□□ -1.78
PMC1YGL006W GEX2P36173 615 aa3.91□□□□□ -1.78
PMC1YGL006W SOL2P37262 315 aa3.91□□□□□ -1.78
PMC1YGL006W CHS7P38843 316 aa3.91□□□□□ -1.78
PMC1YGL006W ASP1P38986 381 aaPredicted RBP3.91□□□□□ -1.78
PMC1YGL006W NEO1P40527 1151 aa3.91□□□□□ -1.78
PMC1YGL006W HXT14P42833 540 aa3.91□□□□□ -1.78
PMC1YGL006W CIN2P46670 268 aa3.91□□□□□ -1.78
PMC1YGL006W MRX5P47007 382 aa3.91□□□□□ -1.78
PMC1YGL006W BAT2P47176 376 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W BUL1P48524 976 aa3.91□□□□□ -1.78
PMC1YGL006W ERG26P53199 349 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W YCL001W-AP87012 153 aa3.91□□□□□ -1.78
PMC1YGL006W YMR178WQ03219 274 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W YDR387CQ04162 555 aa3.91□□□□□ -1.78
PMC1YGL006W KEI1Q06346 221 aa3.91□□□□□ -1.78
PMC1YGL006W MHR1Q06630 226 aa3.91□□□□□ -1.78
PMC1YGL006W NDJ1Q12366 352 aa3.91□□□□□ -1.78
PMC1YGL006W YPR014CQ6B0W2 109 aa3.91□□□□□ -1.78
PMC1YGL006W OLE1P21147 510 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W POF1P25576 258 aa3.91□□□□□ -1.78
PMC1YGL006W YCR100CP25606 316 aa3.91□□□□□ -1.78
PMC1YGL006W EMP24P32803 203 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W YKL162CP36052 402 aa3.91□□□□□ -1.78
PMC1YGL006W ARC40P38328 384 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W FAA3P39002 694 aa3.91□□□□□ -1.78
PMC1YGL006W TIM17P39515 158 aa3.91□□□□□ -1.78
PMC1YGL006W LSM4P40070 187 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W NAS2P40555 220 aa3.91□□□□□ -1.78
PMC1YGL006W YJR056CP47115 236 aa3.91□□□□□ -1.78
PMC1YGL006W MRX6P48564 524 aa3.91□□□□□ -1.78
PMC1YGL006W AVT4P50944 713 aa3.91□□□□□ -1.78
PMC1YGL006W CDH1P53197 566 aa3.91□□□□□ -1.78
PMC1YGL006W DUS1P53759 423 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W CTL1Q03220 320 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W VBA4Q04602 768 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W YLR012CQ07927 99 aa3.91□□□□□ -1.78
PMC1YGL006W TGL5Q12043 749 aa3.91□□□□□ -1.78
PMC1YGL006W RPS31P05759 152 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W YOL163WP0CF20 169 aa3.91□□□□□ -1.78
PMC1YGL006W UBI4P0CG63 381 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W RPL40AP0CH08 128 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W RPL40BP0CH09 128 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W NHP6BP11633 99 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W FUN14P18411 198 aa3.91□□□□□ -1.78
PMC1YGL006W PRE7P23724 241 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W ADH7P25377 361 aa3.91□□□□□ -1.78
PMC1YGL006W PUT3P25502 979 aaPredicted RBP3.91□□□□□ -1.78
PMC1YGL006W SSH4P32343 579 aa3.91□□□□□ -1.78
PMC1YGL006W EDS1P38073 919 aa3.91□□□□□ -1.78
PMC1YGL006W YHR127WP38833 243 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W MET30P39014 640 aa3.91□□□□□ -1.78
PMC1YGL006W APQ12P40532 138 aa3.91□□□□□ -1.78
PMC1YGL006W YJR107WP47145 328 aa3.91□□□□□ -1.78
PMC1YGL006W PBP1P53297 722 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W FMP41P53889 259 aaKnown RBP3.91□□□□□ -1.78
PMC1YGL006W CTF19Q02732 369 aa3.91□□□□□ -1.78
PMC1YGL006W BOP2Q06150 570 aa3.91□□□□□ -1.78
PMC1YGL006W TRM8Q12009 286 aa3.91□□□□□ -1.78
PMC1YGL006W FSH3Q99369 266 aa3.91□□□□□ -1.78
PMC1YGL006W DFR1P07807 211 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
PMC1YGL006W SPS4P09937 338 aa3.9□□□□□ -1.78
PMC1YGL006W YOL162WP0CF19 215 aa3.9□□□□□ -1.78
PMC1YGL006W EPT1P22140 391 aa3.9□□□□□ -1.78
PMC1YGL006W SEC22P22214 214 aa3.9□□□□□ -1.78
PMC1YGL006W ATS1P31386 333 aa3.9□□□□□ -1.78
PMC1YGL006W YEF1P32622 495 aa3.9□□□□□ -1.78
PMC1YGL006W PHO11P35842 467 aa3.9□□□□□ -1.78
PMC1YGL006W EMC3P36039 253 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms