RNA–Protein interactions for RNA: YER180C-A

SLO1, Transcript of Protein interacting with Arl3p, yeast

Gene SLO1, Length 258 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLO1	YER180C-A	SIC1	P38634	284 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	YER184C	P39961	794 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	MOB2	P43563	287 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	IRC7	P43623	340 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	CHA4	P43634	648 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	MRK1	P50873	501 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	YGL101W	P53144	215 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	RCE1	Q03530	315 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	DML1	Q03652	475 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	YAP6	Q03935	383 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	HMO1	Q03973	246 aa	Known RBP	4.66	□□□□□ -1.66
SLO1	YER180C-A	SNO4	Q04902	237 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	RSA3	Q05942	220 aa	Known RBP	4.66	□□□□□ -1.66
SLO1	YER180C-A	HSP33	Q08914	237 aa	Known RBP	4.66	□□□□□ -1.66
SLO1	YER180C-A	HSP32	Q08992	237 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	RTC5	Q12108	567 aa	Known RBP	4.66	□□□□□ -1.66
SLO1	YER180C-A	SIA1	Q12212	622 aa		4.66	□□□□□ -1.66
SLO1	YER180C-A	SIR3	P06701	978 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	CNA1	P23287	553 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	APE2	P32454	952 aa	Known RBP	4.65	□□□□□ -1.67
SLO1	YER180C-A	DPH5	P32469	300 aa	Predicted RBP	4.65	□□□□□ -1.67
SLO1	YER180C-A	YKL187C	P34231	750 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	YKL077W	P36081	392 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	PDX3	P38075	228 aa	Known RBP	4.65	□□□□□ -1.67
SLO1	YER180C-A	YBR220C	P38318	560 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	MLH1	P38920	769 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	SWD1	P39706	426 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	SPO73	P40031	143 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	LSM4	P40070	187 aa	Known RBP	4.65	□□□□□ -1.67
SLO1	YER180C-A	VHR1	P40522	640 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	GDS1	P41913	522 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	AGP3	P43548	558 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	SIP18	P50263	79 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	ASI1	P54074	624 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	APM1	Q00776	475 aa	Predicted RBP	4.65	□□□□□ -1.67
SLO1	YER180C-A	MRP51	Q02950	344 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	SSY1	Q03770	852 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	RSM24	Q03976	319 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	HFD1	Q04458	532 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	SWA2	Q06677	668 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	WHI5	Q12416	295 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	SPO24	Q3E752	67 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	Q0297	Q9ZZV8	51 aa		4.65	□□□□□ -1.67
SLO1	YER180C-A	RPS16A	P0CX51	143 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	RPS16B	P0CX52	143 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	RPL35A	P0CX84	120 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	RPL35B	P0CX85	120 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	URE2	P23202	354 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	CLB2	P24869	491 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	GIT1	P25346	518 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	PRP19	P32523	503 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	MRPL6	P32904	214 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SLO1	YER180C-A	CTF8	P38877	133 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	ISC1	P40015	477 aa	Known RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	YER084W	P40057	128 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	DPB11	P47027	764 aa	Predicted RBP	4.64	□□□□□ -1.67
SLO1	YER180C-A	SAM37	P50110	327 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	EXG2	P52911	562 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	RMR1	P53060	241 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	BRR6	P53062	197 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	PRM8	P53174	237 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	PET191	Q02772	108 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	ABZ2	Q03266	374 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	YDR239C	Q03780	787 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	MIM1	Q08176	113 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	HRT1	Q08273	121 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	MED2	Q12124	431 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	SPC3	Q12133	184 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	HMS1	Q12398	434 aa		4.64	□□□□□ -1.67
SLO1	YER180C-A	POL4	P25615	582 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	DBF20	P32328	564 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SLO1	YER180C-A	YBR096W	P38256	230 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	PRE6	P40303	254 aa	Known RBP	4.63	□□□□□ -1.67
SLO1	YER180C-A	MPH1	P40562	993 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	STB1	P42845	420 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	QRI1	P43123	477 aa	Known RBP	4.63	□□□□□ -1.67
SLO1	YER180C-A	FAR7	P43592	221 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	NIT3	P49954	291 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	COS1	P53822	381 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	RSM28	Q03430	361 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	YDR102C	Q03864	110 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	SPC19	Q03954	165 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	CTS2	Q06350	511 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	UIP4	Q08926	304 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	VIK1	Q12045	647 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	YDL007C-A	Q2V2Q0	85 aa		4.63	□□□□□ -1.67
SLO1	YER180C-A	RPL24A	P04449	155 aa	Known RBP	4.62	□□□□□ -1.67
SLO1	YER180C-A	PHO4	P07270	312 aa	Known RBP	4.62	□□□□□ -1.67
SLO1	YER180C-A	RPC40	P07703	335 aa	Known RBP	4.62	□□□□□ -1.67
SLO1	YER180C-A	SNF6	P18888	332 aa		4.62	□□□□□ -1.67
SLO1	YER180C-A	BUD5	P25300	642 aa	Predicted RBP	4.62	□□□□□ -1.67
SLO1	YER180C-A	PPA2	P28239	310 aa		4.62	□□□□□ -1.67
SLO1	YER180C-A	NAS2	P40555	220 aa		4.62	□□□□□ -1.67
SLO1	YER180C-A	SLS1	P42900	643 aa		4.62	□□□□□ -1.67
SLO1	YER180C-A	IRC5	P43610	853 aa		4.62	□□□□□ -1.67
SLO1	YER180C-A	YGR045C	P53229	120 aa		4.62	□□□□□ -1.67
SLO1	YER180C-A	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SLO1	YER180C-A	NUP116	Q02630	1113 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms