RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C MAK3Q03503 176 aa4.29□□□□□ -1.72
CNL1YDR357C HER2Q03557 464 aa4.29□□□□□ -1.72
CNL1YDR357C AIM34Q03673 198 aa4.29□□□□□ -1.72
CNL1YDR357C YML108WQ03759 105 aa4.29□□□□□ -1.72
CNL1YDR357C VBA1Q04301 562 aa4.29□□□□□ -1.72
CNL1YDR357C SEC13Q04491 297 aaKnown RBP4.29□□□□□ -1.72
CNL1YDR357C YML053CQ04978 212 aa4.29□□□□□ -1.72
CNL1YDR357C CTR3Q06686 241 aa4.29□□□□□ -1.72
CNL1YDR357C ASA1Q06822 443 aa4.29□□□□□ -1.72
CNL1YDR357C SSK1Q07084 712 aa4.29□□□□□ -1.72
CNL1YDR357C RPS10AQ08745 105 aaPredicted RBP4.29□□□□□ -1.72
CNL1YDR357C MLH3Q12083 715 aa4.29□□□□□ -1.72
CNL1YDR357C RKI1Q12189 258 aa4.29□□□□□ -1.72
CNL1YDR357C ATG34Q12292 412 aa4.29□□□□□ -1.72
CNL1YDR357C SNU23Q12368 194 aaPredicted RBP4.29□□□□□ -1.72
CNL1YDR357C HMS1Q12398 434 aa4.29□□□□□ -1.72
CNL1YDR357C IZH4Q99393 312 aa4.29□□□□□ -1.72
CNL1YDR357C VPS15P22219 1454 aa4.29□□□□□ -1.72
CNL1YDR357C CDC28P00546 298 aaKnown RBP4.28□□□□□ -1.72
CNL1YDR357C NMT1P14743 455 aa4.28□□□□□ -1.72
CNL1YDR357C MBR1P23493 339 aa4.28□□□□□ -1.72
CNL1YDR357C DCC1P25559 380 aa4.28□□□□□ -1.72
CNL1YDR357C SEC1P30619 724 aaKnown RBP4.28□□□□□ -1.72
CNL1YDR357C COX13P32799 129 aa4.28□□□□□ -1.72
CNL1YDR357C CSG2P35206 410 aa4.28□□□□□ -1.72
CNL1YDR357C JEN1P36035 616 aa4.28□□□□□ -1.72
CNL1YDR357C YCR087C-AP37263 153 aa4.28□□□□□ -1.72
CNL1YDR357C CTP1P38152 299 aa4.28□□□□□ -1.72
CNL1YDR357C YBP1P38315 674 aa4.28□□□□□ -1.72
CNL1YDR357C GRE3P38715 327 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
CNL1YDR357C YHR035WP38769 630 aa4.28□□□□□ -1.72
CNL1YDR357C RBG1P39729 369 aa4.28□□□□□ -1.72
CNL1YDR357C HPM1P40481 377 aa4.28□□□□□ -1.72
CNL1YDR357C YIA6P40556 373 aa4.28□□□□□ -1.72
CNL1YDR357C CHA4P43634 648 aa4.28□□□□□ -1.72
CNL1YDR357C YJR012CP47087 207 aa4.28□□□□□ -1.72
CNL1YDR357C JHD2P47156 728 aaPredicted RBP4.28□□□□□ -1.72
CNL1YDR357C TIS11P47977 285 aa4.28□□□□□ -1.72
CNL1YDR357C NBP1P52919 319 aaPredicted RBP4.28□□□□□ -1.72
CNL1YDR357C ALG13P53178 202 aa4.28□□□□□ -1.72
CNL1YDR357C DUG3P53871 357 aa4.28□□□□□ -1.72
CNL1YDR357C YNL095CP53932 642 aa4.28□□□□□ -1.72
CNL1YDR357C AAT1Q01802 451 aa4.28□□□□□ -1.72
CNL1YDR357C YVH1Q02256 364 aaKnown RBP4.28□□□□□ -1.72
CNL1YDR357C SNT309Q06091 175 aaPredicted RBP4.28□□□□□ -1.72
CNL1YDR357C NCE102Q12207 173 aaRIP-Chip data4.28□□□□□ -1.72not detected
CNL1YDR357C YCT1Q12235 531 aa4.28□□□□□ -1.72
CNL1YDR357C ICT1Q12385 394 aa4.28□□□□□ -1.72
CNL1YDR357C RDI1Q12434 202 aa4.28□□□□□ -1.72
CNL1YDR357C PAN1P32521 1480 aa4.28□□□□□ -1.72
CNL1YDR357C SIN3P22579 1536 aa4.27□□□□□ -1.73
CNL1YDR357C TPK3P05986 398 aa4.27□□□□□ -1.73
CNL1YDR357C IMA3P0CW40 589 aa4.27□□□□□ -1.73
CNL1YDR357C IMA4P0CW41 589 aa4.27□□□□□ -1.73
CNL1YDR357C TYR1P20049 452 aa4.27□□□□□ -1.73
CNL1YDR357C YCR101CP25607 182 aa4.27□□□□□ -1.73
CNL1YDR357C APE2P32454 952 aaKnown RBP4.27□□□□□ -1.73
CNL1YDR357C RAD5P32849 1169 aaPredicted RBP4.27□□□□□ -1.73
CNL1YDR357C RPS1AP33442 255 aaKnown RBP4.27□□□□□ -1.73
CNL1YDR357C MSN2P33748 704 aa4.27□□□□□ -1.73
CNL1YDR357C ELF1P36053 145 aa4.27□□□□□ -1.73
CNL1YDR357C HEK2P38199 381 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
CNL1YDR357C IST2P38250 946 aa4.27□□□□□ -1.73
CNL1YDR357C GOS1P38736 223 aa4.27□□□□□ -1.73
CNL1YDR357C YHI9P38765 294 aa4.27□□□□□ -1.73
CNL1YDR357C YAL037WP39728 267 aa4.27□□□□□ -1.73
CNL1YDR357C RGI1P40043 161 aaPredicted RBP4.27□□□□□ -1.73
CNL1YDR357C RPS10BP46784 105 aaKnown RBP4.27□□□□□ -1.73
CNL1YDR357C ARL3Q02804 198 aa4.27□□□□□ -1.73
CNL1YDR357C SNU56Q03782 492 aaKnown RBP4.27□□□□□ -1.73
CNL1YDR357C YDR387CQ04162 555 aa4.27□□□□□ -1.73
CNL1YDR357C GRX8Q05926 109 aa4.27□□□□□ -1.73
CNL1YDR357C FRQ1Q06389 190 aa4.27□□□□□ -1.73
CNL1YDR357C NOC4Q06512 552 aaPredicted RBP4.27□□□□□ -1.73
CNL1YDR357C YPR091CQ06833 770 aa4.27□□□□□ -1.73
CNL1YDR357C IMA2Q08295 589 aa4.27□□□□□ -1.73
CNL1YDR357C MES1P00958 751 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C RPL20AP0CX23 172 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C RPL20BP0CX24 172 aaPredicted RBP4.26□□□□□ -1.73
CNL1YDR357C CUP2P15315 225 aa4.26□□□□□ -1.73
CNL1YDR357C BUD23P25627 275 aaPredicted RBP4.26□□□□□ -1.73
CNL1YDR357C HOM6P31116 359 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C GSP1P32835 219 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C GSP2P32836 220 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C YKL187CP34231 750 aa4.26□□□□□ -1.73
CNL1YDR357C ECM15P35195 104 aa4.26□□□□□ -1.73
CNL1YDR357C FLO10P36170 1169 aa4.26□□□□□ -1.73
CNL1YDR357C EFM1P38732 585 aa4.26□□□□□ -1.73
CNL1YDR357C RRG9P40156 214 aa4.26□□□□□ -1.73
CNL1YDR357C SYG1P40528 902 aa4.26□□□□□ -1.73
CNL1YDR357C FMP32P43557 207 aa4.26□□□□□ -1.73
CNL1YDR357C SOL4P53315 255 aa4.26□□□□□ -1.73
CNL1YDR357C CAF40P53829 373 aa4.26□□□□□ -1.73
CNL1YDR357C ASI3P53983 676 aa4.26□□□□□ -1.73
CNL1YDR357C YMR279CQ03263 540 aa4.26□□□□□ -1.73
CNL1YDR357C PKR1Q03880 122 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C CSN9Q03981 162 aa4.26□□□□□ -1.73
CNL1YDR357C YMR315WQ04869 349 aaKnown RBP4.26□□□□□ -1.73
CNL1YDR357C INM2Q05533 292 aa4.26□□□□□ -1.73
CNL1YDR357C HRD3Q05787 833 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms