RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W YLR460CP54007 376 aa2.29□□□□□ -2.04
SWR1YDR334W MPS1P54199 764 aa2.29□□□□□ -2.04
SWR1YDR334W ERG13P54839 491 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W YMR102CQ03177 834 aa2.29□□□□□ -2.04
SWR1YDR334W BNA5Q05979 453 aa2.29□□□□□ -2.04
SWR1YDR334W CLP1Q08685 445 aaPredicted RBP2.29□□□□□ -2.04
SWR1YDR334W PSF1Q12488 208 aa2.29□□□□□ -2.04
SWR1YDR334W YNL162W-AQ3E7A8 72 aa2.29□□□□□ -2.04
SWR1YDR334W RPL28P02406 149 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W PBI2P0CT04 75 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W RSR1P13856 272 aa2.29□□□□□ -2.04
SWR1YDR334W IDP1P21954 428 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W RAD14P28519 371 aa2.29□□□□□ -2.04
SWR1YDR334W EHD3P28817 500 aa2.29□□□□□ -2.04
SWR1YDR334W MSS51P32335 436 aa2.29□□□□□ -2.04
SWR1YDR334W MVD1P32377 396 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W SFC1P33303 322 aa2.29□□□□□ -2.04
SWR1YDR334W IST2P38250 946 aa2.29□□□□□ -2.04
SWR1YDR334W PSD1P39006 500 aa2.29□□□□□ -2.04
SWR1YDR334W SEC72P39742 193 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W PRP24P49960 444 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W SED5Q01590 340 aa2.29□□□□□ -2.04
SWR1YDR334W YDL242WQ07746 117 aa2.29□□□□□ -2.04
SWR1YDR334W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SWR1YDR334W PRS5Q12265 496 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W RGS2Q99188 309 aa2.29□□□□□ -2.04
SWR1YDR334W TAD3Q9URQ3 322 aa2.29□□□□□ -2.04
SWR1YDR334W RPS25BP0C0T4 108 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W ANB1P19211 157 aa2.29□□□□□ -2.04
SWR1YDR334W RPL24BP24000 155 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W AST1P35183 429 aa2.29□□□□□ -2.04
SWR1YDR334W OCT1P35999 772 aa2.29□□□□□ -2.04
SWR1YDR334W PRS3P38689 320 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W MTC6P38849 526 aa2.29□□□□□ -2.04
SWR1YDR334W LYS12P40495 371 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W NBP1P52919 319 aaPredicted RBP2.29□□□□□ -2.04
SWR1YDR334W DIP5P53388 608 aa2.29□□□□□ -2.04
SWR1YDR334W YNL092WP53934 400 aa2.29□□□□□ -2.04
SWR1YDR334W MOT3P54785 490 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W DML1Q03652 475 aa2.29□□□□□ -2.04
SWR1YDR334W CNL1Q06333 122 aa2.29□□□□□ -2.04
SWR1YDR334W SDO1Q07953 250 aaKnown RBP2.29□□□□□ -2.04
SWR1YDR334W RTR2Q12378 196 aa2.29□□□□□ -2.04
SWR1YDR334W RPS25AQ3E792 108 aaPredicted RBP2.29□□□□□ -2.04
SWR1YDR334W DYN1P36022 4092 aa2.28□□□□□ -2.04
SWR1YDR334W MDM35O60200 86 aa2.28□□□□□ -2.04
SWR1YDR334W COX5AP00424 153 aa2.28□□□□□ -2.04
SWR1YDR334W ADE3P07245 946 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W YML003WP0CF16 290 aa2.28□□□□□ -2.04
SWR1YDR334W RPS16AP0CX51 143 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W RPS16BP0CX52 143 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W SPT15P13393 240 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W CBS1P14066 229 aa2.28□□□□□ -2.04
SWR1YDR334W YCR101CP25607 182 aa2.28□□□□□ -2.04
SWR1YDR334W YBL055CP34220 418 aaPredicted RBP2.28□□□□□ -2.04
SWR1YDR334W ROT2P38138 954 aa2.28□□□□□ -2.04
SWR1YDR334W SDS24P38314 527 aa2.28□□□□□ -2.04
SWR1YDR334W URA8P38627 578 aaPredicted RBP2.28□□□□□ -2.04
SWR1YDR334W DBP8P38719 431 aa2.28□□□□□ -2.04
SWR1YDR334W YPI1P43587 155 aa2.28□□□□□ -2.04
SWR1YDR334W HOC1P47124 396 aa2.28□□□□□ -2.04
SWR1YDR334W YJR154WP47181 346 aa2.28□□□□□ -2.04
SWR1YDR334W CWC23P52868 283 aaPredicted RBP2.28□□□□□ -2.04
SWR1YDR334W TPN1P53099 579 aa2.28□□□□□ -2.04
SWR1YDR334W OST6Q03723 332 aa2.28□□□□□ -2.04
SWR1YDR334W URC2Q04411 772 aa2.28□□□□□ -2.04
SWR1YDR334W ATG10Q07879 167 aa2.28□□□□□ -2.04
SWR1YDR334W SWT1Q12104 458 aa2.28□□□□□ -2.04
SWR1YDR334W TRM10Q12400 293 aa2.28□□□□□ -2.04
SWR1YDR334W SPE4Q12455 300 aa2.28□□□□□ -2.04
SWR1YDR334W TDH3P00359 332 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SWR1YDR334W SAM1P10659 382 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W STE12P13574 688 aa2.28□□□□□ -2.04
SWR1YDR334W RSA4P25382 515 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W WBP1P33767 430 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W YHR182WP38870 785 aa2.28□□□□□ -2.04
SWR1YDR334W YAL037WP39728 267 aa2.28□□□□□ -2.04
SWR1YDR334W YIL161WP40449 235 aaKnown RBP2.28□□□□□ -2.04
SWR1YDR334W YJR011CP47086 261 aaPredicted RBP2.28□□□□□ -2.04
SWR1YDR334W SDS23P53172 527 aa2.28□□□□□ -2.04
SWR1YDR334W CPD1P53314 239 aa2.28□□□□□ -2.04
SWR1YDR334W SWP1Q02795 286 aa2.28□□□□□ -2.04
SWR1YDR334W ATC1Q04005 294 aa2.28□□□□□ -2.04
SWR1YDR334W AIM33Q04516 312 aa2.28□□□□□ -2.04
SWR1YDR334W SML1Q04964 104 aa2.28□□□□□ -2.04
SWR1YDR334W YPR127WQ06494 345 aa2.28□□□□□ -2.04
SWR1YDR334W ZPS1Q12512 249 aa2.28□□□□□ -2.04
SWR1YDR334W SCEIP03882 235 aa2.28□□□□□ -2.04
SWR1YDR334W PUT2P07275 575 aa2.28□□□□□ -2.04
SWR1YDR334W PET111P08468 800 aa2.28□□□□□ -2.04
SWR1YDR334W MATALPHA2P0CY08 210 aa2.28□□□□□ -2.04
SWR1YDR334W HMLALPHA2P0CY09 210 aa2.28□□□□□ -2.04
SWR1YDR334W RAP1P11938 827 aa2.28□□□□□ -2.04
SWR1YDR334W CTA1P15202 515 aa2.28□□□□□ -2.04
SWR1YDR334W HEM15P16622 393 aa2.28□□□□□ -2.04
SWR1YDR334W RML2P32611 393 aa2.28□□□□□ -2.04
SWR1YDR334W YPK3P38070 525 aa2.28□□□□□ -2.04
SWR1YDR334W MOH1P38191 138 aa2.28□□□□□ -2.04
SWR1YDR334W YHR045WP38775 560 aa2.28□□□□□ -2.04
SWR1YDR334W SPL2P38839 148 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 114.7 ms