RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	ARG81	P05085	880 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	TKL1	P23254	680 aa	Known RBP	4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	YGP1	P38616	354 aa	Known RBP	4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	COS10	P52924	374 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	LSC2	P53312	427 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	DET1	Q99288	334 aa	Known RBP	4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	AI2	P03876	854 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	MSW1	P04803	379 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
YDR261C-D	YDR261C-D	NAR1	P23503	491 aa	Known RBP	4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	PCL2	P25693	308 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	RIM1	P32445	135 aa	Known RBP	4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	ECM31	P38122	312 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	GCV1	P48015	400 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	YNL143C	P53908	130 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	DOT1	Q04089	582 aa	Known RBP	4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	YOL019W	Q08157	551 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPL150W	Q12152	901 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	PNS1	Q12412	539 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	EAF3	Q12432	401 aa		4.26	□□□□□ -1.73
YDR261C-D	YDR261C-D	SPO7	P18410	259 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YOX1	P34161	385 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	TRR2	P38816	342 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	PSD1	P39006	500 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	NGL2	Q03264	515 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	ARX1	Q03862	593 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	CST9	Q06032	482 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	SWC7	Q06707	132 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	MHT1	Q12525	324 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	UBA3	Q99344	299 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	RAD10	P06838	210 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	SLY41	P22215	453 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YKL070W	P36087	169 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	GMH1	P36125	273 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YBR056W	P38081	501 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YBR062C	P38239	180 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	AVT4	P50944	713 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	TMA23	Q03525	211 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YDR249C	Q03787	373 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	PLM2	Q04383	521 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	RNH202	Q05635	350 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YLR363W-A	Q3E747	85 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY1A-H	P0C2I4	478 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	URA5	P13298	226 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	BAS1	P22035	811 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YKL107W	P34251	309 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	ASK1	P35734	292 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	BTT1	P40314	149 aa	Predicted RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	IST3	P40565	148 aa	Predicted RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	VMA21	P41806	77 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YJR124C	P47159	448 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YGL159W	P53110	370 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	DUO1	P53168	247 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	CDC14	Q00684	551 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	MEC3	Q02574	474 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	PLB2	Q03674	706 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YLR040C	Q07988	224 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	HIS1	P00498	297 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	VAR1	P02381	398 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	RPS25B	P0C0T4	108 aa	Known RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	TIR1	P10863	254 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	RPD3	P32561	433 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	CHS7	P38843	316 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YGL138C	P53122	345 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	SAM50	P53969	484 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	PRP38	Q00723	242 aa	Predicted RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPL068C	Q02749	293 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPR098C	Q06089	161 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	NUT2	Q06213	157 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	WSC3	Q12215	556 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	NPC2	Q12408	173 aa		4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	RPS25A	Q3E792	108 aa	Predicted RBP	4.25	□□□□□ -1.73
YDR261C-D	YDR261C-D	AMD1	P15274	810 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	OSM1	P21375	501 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	THI80	P35202	319 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	OMA1	P36163	345 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	ECM21	P38167	1117 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	RRT2	P38332	387 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	GAT1	P43574	510 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	ERG26	P53199	349 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	OST6	Q03723	332 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	OPI10	Q08202	246 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	SMT3	Q12306	101 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YIR021W-A	Q3E739	70 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	RTG1	P32607	177 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	SPC29	P33419	253 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	FRE2	P36033	711 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YKL071W	P36086	256 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TAT1	P38085	619 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	SNU13	P39990	126 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	VHS2	P40463	436 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	SSU1	P41930	458 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	CDH1	P53197	566 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	BIO4	P53630	237 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	CRR1	Q05790	422 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YLR446W	Q06204	433 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	THI22	Q06490	572 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	CDC73	Q06697	393 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	INP54	Q08227	384 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPR202W	Q08993	238 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms