RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	MYO3	P36006	1272 aa		0.97	□□□□□ -2.25
SWF1	YDR126W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	not detected
SWF1	YDR126W	YIL089W	P40500	205 aa		0.97	□□□□□ -2.25
SWF1	YDR126W	YFL064C	P43540	174 aa		0.97	□□□□□ -2.25
SWF1	YDR126W	EBS1	Q03466	884 aa	Known RBP	0.97	□□□□□ -2.25
SWF1	YDR126W	PAR32	Q12515	295 aa	Known RBP	0.97	□□□□□ -2.25
SWF1	YDR126W	PUP2	P32379	260 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	VMA8	P32610	256 aa	Known RBP	0.96	□□□□□ -2.26
SWF1	YDR126W	GCG1	P32656	232 aa	Known RBP	0.96	□□□□□ -2.26
SWF1	YDR126W	GPX1	P36014	167 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	YHR045W	P38775	560 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	GDI1	P39958	451 aa	Known RBP	0.96	□□□□□ -2.26
SWF1	YDR126W	MND1	P53102	219 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	PXR1	P53335	271 aa	Predicted RBP	0.96	□□□□□ -2.26
SWF1	YDR126W	GRH1	Q04410	372 aa	Known RBP	0.96	□□□□□ -2.26
SWF1	YDR126W	NNT1	Q05874	261 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	EMC6	Q12431	108 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	AGC1	Q12482	902 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	DCP1	Q12517	231 aa	Predicted RBP	0.96	□□□□□ -2.26
SWF1	YDR126W	RGS2	Q99188	309 aa		0.96	□□□□□ -2.26
SWF1	YDR126W	ERD1	P16151	362 aa		0.95	□□□□□ -2.26
SWF1	YDR126W	COY1	P34237	679 aa		0.95	□□□□□ -2.26
SWF1	YDR126W	COS6	P53344	381 aa		0.95	□□□□□ -2.26
SWF1	YDR126W	TVP15	Q03860	143 aa		0.95	□□□□□ -2.26
SWF1	YDR126W	CTS2	Q06350	511 aa		0.95	□□□□□ -2.26
SWF1	YDR126W	YLL053C	P0CD98	152 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	HXT2	P23585	541 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	YSW1	P38280	609 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	MBA1	P38300	278 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	SOP4	P39543	234 aa	Predicted RBP	0.94	□□□□□ -2.26
SWF1	YDR126W	BTT1	P40314	149 aa	Predicted RBP	0.94	□□□□□ -2.26
SWF1	YDR126W	YIL012W	P40551	113 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	OST3	P48439	350 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	TAF6	P53040	516 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	SLM2	P53955	656 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	YDL144C	Q07589	356 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	LAG2	Q92325	660 aa		0.94	□□□□□ -2.26
SWF1	YDR126W	TDH1	P00360	332 aa	Known RBP	0.93	□□□□□ -2.26
SWF1	YDR126W	GAL7	P08431	366 aa		0.93	□□□□□ -2.26
SWF1	YDR126W	ACB1	P31787	87 aa		0.93	□□□□□ -2.26
SWF1	YDR126W	MRPL3	P36516	390 aa		0.93	□□□□□ -2.26
SWF1	YDR126W	LSM4	P40070	187 aa	Known RBP	0.93	□□□□□ -2.26
SWF1	YDR126W	AVT6	P40074	448 aa		0.93	□□□□□ -2.26
SWF1	YDR126W	MRPL49	P40858	161 aa	Predicted RBP	0.93	□□□□□ -2.26
SWF1	YDR126W	RPA34	P47006	233 aa	Predicted RBP	0.93	□□□□□ -2.26
SWF1	YDR126W	PRP24	P49960	444 aa	Known RBP	0.93	□□□□□ -2.26
SWF1	YDR126W	FCF1	Q05498	189 aa	Predicted RBP	0.93	□□□□□ -2.26
SWF1	YDR126W	YPL278C	Q08990	100 aa		0.93	□□□□□ -2.26
SWF1	YDR126W	YPL150W	Q12152	901 aa		0.93	□□□□□ -2.26
SWF1	YDR126W	CDC13	P32797	924 aa	Known RBP	0.92	□□□□□ -2.26
SWF1	YDR126W	LRP1	P38801	184 aa	Known RBP	0.92	□□□□□ -2.26
SWF1	YDR126W	SPL2	P38839	148 aa		0.92	□□□□□ -2.26
SWF1	YDR126W	RCF1	Q03713	159 aa		0.92	□□□□□ -2.26
SWF1	YDR126W	IFM1	P25038	676 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	YCR025C	P25352	136 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	BLI1	P35727	113 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	SUR2	P38992	349 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	COG3	P40094	801 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	YGR016W	P53209	190 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	YLR446W	Q06204	433 aa		0.91	□□□□□ -2.26
SWF1	YDR126W	IMP1	P28627	190 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	YOR062C	P36025	268 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	PRP39	P39682	629 aa	Known RBP	0.9	□□□□□ -2.27
SWF1	YDR126W	UTP25	P40498	721 aa	Known RBP	0.9	□□□□□ -2.27
SWF1	YDR126W	SEC28	P40509	296 aa	Known RBP	0.9	□□□□□ -2.27
SWF1	YDR126W	YFL040W	P43562	540 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	RVB1	Q03940	463 aa	Known RBP	0.9	□□□□□ -2.27
SWF1	YDR126W	YOR268C	Q08734	132 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	ATG5	Q12380	294 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	ERP4	Q12450	207 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	SKS1	Q12505	502 aa		0.9	□□□□□ -2.27
SWF1	YDR126W	VMA5	P31412	392 aa	Known RBP	0.89	□□□□□ -2.27
SWF1	YDR126W	DAD2	P36162	133 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	YBR062C	P38239	180 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	ALP1	P38971	573 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	CAJ1	P39101	391 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	TPN1	P53099	579 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	YLL007C	Q07799	665 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	BOL1	Q3E793	110 aa		0.89	□□□□□ -2.27
SWF1	YDR126W	PAN1	P32521	1480 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	NUP157	P40064	1391 aa	Known RBP	0.88	□□□□□ -2.27
SWF1	YDR126W	OSM1	P21375	501 aa	Known RBP	0.88	□□□□□ -2.27
SWF1	YDR126W	TPO5	P36029	618 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	KRE29	P40026	464 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	JEM1	P40358	645 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	YJL016W	P47072	561 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	EOS1	P53938	366 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	SNX41	Q04053	625 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	SPO24	Q3E752	67 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	NBL1	Q3E7Y6	73 aa		0.88	□□□□□ -2.27
SWF1	YDR126W	RAD10	P06838	210 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	RPL16B	P26785	198 aa	Known RBP	0.87	□□□□□ -2.27
SWF1	YDR126W	SWI3	P32591	825 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	YHL026C	P38740	315 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	YHR035W	P38769	630 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	CAB4	P53332	305 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	SWT21	P53873	357 aa	Predicted RBP	0.87	□□□□□ -2.27
SWF1	YDR126W	YNL143C	P53908	130 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	IRC4	Q03036	179 aa		0.87	□□□□□ -2.27
SWF1	YDR126W	UTP23	Q12339	254 aa	Known RBP	0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 81.4 ms