RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C UTP25P40498 721 aaKnown RBP1.54□□□□□ -2.16
ASM4YDL088C LIA1P47120 325 aaKnown RBP1.54□□□□□ -2.16
ASM4YDL088C LSG1P53145 640 aaKnown RBP1.54□□□□□ -2.16
ASM4YDL088C YNL260CP53846 198 aa1.54□□□□□ -2.16
ASM4YDL088C CWC21Q03375 135 aaKnown RBP1.54□□□□□ -2.16
ASM4YDL088C SMP3Q04174 516 aa1.54□□□□□ -2.16
ASM4YDL088C DXO1Q06349 442 aa1.54□□□□□ -2.16
ASM4YDL088C YPL264CQ08980 353 aa1.54□□□□□ -2.16
ASM4YDL088C MRPL23Q12487 163 aaPredicted RBP1.54□□□□□ -2.16
ASM4YDL088C TDH1P00360 332 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C RPL24AP04449 155 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C RPS16AP0CX51 143 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C RPS16BP0CX52 143 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C ARF2P19146 181 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C NTG1P31378 399 aa1.53□□□□□ -2.16
ASM4YDL088C ACB1P31787 87 aa1.53□□□□□ -2.16
ASM4YDL088C BUD2P33314 1104 aa1.53□□□□□ -2.16
ASM4YDL088C YKL070WP36087 169 aa1.53□□□□□ -2.16
ASM4YDL088C HSM3P38348 480 aa1.53□□□□□ -2.16
ASM4YDL088C SMF2P38778 549 aa1.53□□□□□ -2.16
ASM4YDL088C BFR1P38934 470 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
ASM4YDL088C BTT1P40314 149 aaPredicted RBP1.53□□□□□ -2.16
ASM4YDL088C INA22P40576 216 aa1.53□□□□□ -2.16
ASM4YDL088C GCN20P43535 752 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C AGX1P43567 385 aa1.53□□□□□ -2.16
ASM4YDL088C MND1P53102 219 aa1.53□□□□□ -2.16
ASM4YDL088C PNC1P53184 216 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C GRX3Q03835 250 aa1.53□□□□□ -2.16
ASM4YDL088C RVB1Q03940 463 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C ATC1Q04005 294 aa1.53□□□□□ -2.16
ASM4YDL088C BCP1Q06338 283 aa1.53□□□□□ -2.16
ASM4YDL088C RRT8Q08219 342 aa1.53□□□□□ -2.16
ASM4YDL088C APC5Q08683 685 aa1.53□□□□□ -2.16
ASM4YDL088C SGT2Q12118 346 aaKnown RBP1.53□□□□□ -2.16
ASM4YDL088C MED4Q12343 284 aa1.53□□□□□ -2.16
ASM4YDL088C IES3Q12345 250 aa1.53□□□□□ -2.16
ASM4YDL088C SPO24Q3E752 67 aa1.53□□□□□ -2.16
ASM4YDL088C CAR2P07991 424 aaKnown RBP1.52□□□□□ -2.17
ASM4YDL088C KRE1P17260 313 aa1.52□□□□□ -2.17
ASM4YDL088C CKI1P20485 582 aa1.52□□□□□ -2.17
ASM4YDL088C CIN8P27895 1000 aa1.52□□□□□ -2.17
ASM4YDL088C ERG9P29704 444 aa1.52□□□□□ -2.17
ASM4YDL088C VMA5P31412 392 aaKnown RBP1.52□□□□□ -2.17
ASM4YDL088C MRPS5P33759 307 aa1.52□□□□□ -2.17
ASM4YDL088C TPO5P36029 618 aa1.52□□□□□ -2.17
ASM4YDL088C MED8P38304 223 aa1.52□□□□□ -2.17
ASM4YDL088C CTM1P38818 585 aa1.52□□□□□ -2.17
ASM4YDL088C RCY1P39531 840 aa1.52□□□□□ -2.17
ASM4YDL088C COX16P47081 118 aa1.52□□□□□ -2.17
ASM4YDL088C YGR266WP53326 701 aa1.52□□□□□ -2.17
ASM4YDL088C YNL050CP53952 270 aa1.52□□□□□ -2.17
ASM4YDL088C SRL4Q03085 281 aa1.52□□□□□ -2.17
ASM4YDL088C BOP2Q06150 570 aa1.52□□□□□ -2.17
ASM4YDL088C YOR012WQ12351 137 aa1.52□□□□□ -2.17
ASM4YDL088C RSR1P13856 272 aa1.51□□□□□ -2.17
ASM4YDL088C MEK1P24719 497 aaPredicted RBP1.51□□□□□ -2.17
ASM4YDL088C RBK1P25332 333 aa1.51□□□□□ -2.17
ASM4YDL088C DCC1P25559 380 aa1.51□□□□□ -2.17
ASM4YDL088C MXR2P25566 168 aa1.51□□□□□ -2.17
ASM4YDL088C ARO4P32449 370 aaKnown RBP1.51□□□□□ -2.17
ASM4YDL088C MRPL37P36532 105 aa1.51□□□□□ -2.17
ASM4YDL088C SLM1P40485 686 aa1.51□□□□□ -2.17
ASM4YDL088C KEL2P50090 882 aa1.51□□□□□ -2.17
ASM4YDL088C TAF6P53040 516 aa1.51□□□□□ -2.17
ASM4YDL088C BUR2Q05949 395 aa1.51□□□□□ -2.17
ASM4YDL088C YLR173WQ06247 608 aa1.51□□□□□ -2.17
ASM4YDL088C SIA1Q12212 622 aa1.51□□□□□ -2.17
ASM4YDL088C PAA1Q12447 191 aaKnown RBP1.51□□□□□ -2.17
ASM4YDL088C YPR1Q12458 312 aa1.51□□□□□ -2.17
ASM4YDL088C MRX4Q12467 430 aa1.51□□□□□ -2.17
ASM4YDL088C FMP16Q12497 93 aa1.51□□□□□ -2.17
ASM4YDL088C RPB4P20433 221 aaPredicted RBP1.51□□□□□ -2.17
ASM4YDL088C COT1P32798 439 aa1.51□□□□□ -2.17
ASM4YDL088C RPT5P33297 434 aaKnown RBP1.51□□□□□ -2.17
ASM4YDL088C MYO3P36006 1272 aa1.51□□□□□ -2.17
ASM4YDL088C YFR045WP43617 309 aa1.51□□□□□ -2.17
ASM4YDL088C MRX5P47007 382 aa1.51□□□□□ -2.17
ASM4YDL088C KAP114P53067 1004 aa1.51□□□□□ -2.17
ASM4YDL088C YGL185CP53100 379 aa1.51□□□□□ -2.17
ASM4YDL088C YGR168CP53293 376 aa1.51□□□□□ -2.17
ASM4YDL088C CSM3Q04659 317 aa1.51□□□□□ -2.17
ASM4YDL088C NAT4Q04751 285 aa1.51□□□□□ -2.17
ASM4YDL088C YLL007CQ07799 665 aa1.51□□□□□ -2.17
ASM4YDL088C RPN6Q12377 434 aa1.51□□□□□ -2.17
ASM4YDL088C SSK22P25390 1331 aaPredicted RBP1.5□□□□□ -2.17
ASM4YDL088C RAD1P06777 1100 aa1.5□□□□□ -2.17
ASM4YDL088C RPL18AP0CX49 186 aaKnown RBP1.5□□□□□ -2.17
ASM4YDL088C RPL18BP0CX50 186 aaKnown RBP1.5□□□□□ -2.17
ASM4YDL088C FRS2P15625 503 aaKnown RBP1.5□□□□□ -2.17
ASM4YDL088C UTR1P21373 530 aa1.5□□□□□ -2.17
ASM4YDL088C RSA4P25382 515 aaKnown RBP1.5□□□□□ -2.17
ASM4YDL088C GCG1P32656 232 aaKnown RBP1.5□□□□□ -2.17
ASM4YDL088C IML3P38265 245 aa1.5□□□□□ -2.17
ASM4YDL088C MED6P38782 295 aa1.5□□□□□ -2.17
ASM4YDL088C ASP1P38986 381 aaPredicted RBP1.5□□□□□ -2.17
ASM4YDL088C YAR1P46683 200 aa1.5□□□□□ -2.17
ASM4YDL088C OKP1P53298 406 aa1.5□□□□□ -2.17
ASM4YDL088C GMC2Q06201 188 aa1.5□□□□□ -2.17
ASM4YDL088C ARV1Q06541 321 aa1.5□□□□□ -2.17
ASM4YDL088C GPN3Q06543 272 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms