RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	YBR220C	P38318	560 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	BNA3	P47039	444 aa	Known RBP	3.76	□□□□□ -1.81
RDH54	YBR073W	COX18	P53239	316 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	YGR079W	P53249	370 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	YNL040W	P53960	456 aa	Predicted RBP	3.76	□□□□□ -1.81
RDH54	YBR073W	HSK3	P69852	69 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	HOF1	Q05080	669 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	FRQ1	Q06389	190 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	LOA1	Q06508	300 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	YDL218W	Q07629	317 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	YOR283W	Q12040	230 aa	Known RBP	3.76	□□□□□ -1.81
RDH54	YBR073W	FOL3	Q12676	427 aa	Predicted RBP	3.76	□□□□□ -1.81
RDH54	YBR073W	ECM3	Q99252	613 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	FSH3	Q99369	266 aa		3.76	□□□□□ -1.81
RDH54	YBR073W	DOP1	Q03921	1698 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	YSR3	P23501	404 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	SPS18	P32572	300 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	ECM15	P35195	104 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	HES1	P35843	434 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	FMP23	P38231	175 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	TRM7	P38238	310 aa	Known RBP	3.75	□□□□□ -1.81
RDH54	YBR073W	RIO2	P40160	425 aa	Known RBP	3.75	□□□□□ -1.81
RDH54	YBR073W	TOS8	P53147	276 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	YNL184C	P53876	108 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	YPL068C	Q02749	293 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	PEX27	Q08580	376 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	AKR2	Q12013	749 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	YOR114W	Q12219	294 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	VPS15	P22219	1454 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	NHP6A	P11632	93 aa	Known RBP	3.75	□□□□□ -1.81
RDH54	YBR073W	HEM15	P16622	393 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	FEN2	P25621	512 aa	Known RBP	3.75	□□□□□ -1.81
RDH54	YBR073W	GAC1	P28006	793 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	HYM1	P32464	399 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	RAD5	P32849	1169 aa	Predicted RBP	3.75	□□□□□ -1.81
RDH54	YBR073W	YKL097C	P34245	136 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	SRY1	P36007	326 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	YBR241C	P38142	488 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	INM1	P38710	295 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	IPI1	P38803	334 aa	Predicted RBP	3.75	□□□□□ -1.81
RDH54	YBR073W	MET30	P39014	640 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	YER076C	P40049	302 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	FAR3	P46671	204 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	ORC5	P50874	479 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	ABF2	Q02486	183 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	TDA6	Q06466	467 aa		3.75	□□□□□ -1.81
RDH54	YBR073W	GAL10	P04397	699 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	NSP1	P14907	823 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	SCO2	P38072	301 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	YPT10	P38146	199 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	SAS2	P40963	338 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	VEL1	P53058	206 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	TEX1	P53851	422 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	CWC27	Q02770	301 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	YDR391C	Q04170	232 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	RAV1	P47104	1357 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	CDC8	P00572	216 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	YMR085W	P0CF18	432 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	YPK1	P12688	680 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	GAR1	P28007	205 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	NUP2	P32499	720 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	GDA1	P32621	518 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	TMT1	P32643	299 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	GSP1	P32835	219 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	GSP2	P32836	220 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	PPZ2	P33329	710 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	SKN1	P33336	771 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	IST2	P38250	946 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	SHG1	P38337	142 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	PHM8	P40025	321 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	IMD3	P50095	523 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	SMP3	Q04174	516 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	HRD1	Q08109	551 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	MRH1	Q12117	320 aa	Predicted RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	FRE7	Q12333	620 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	LPX1	Q12405	387 aa	Known RBP	3.74	□□□□□ -1.81
RDH54	YBR073W	YKL033W-A	Q86ZR7	236 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	PAN1	P32521	1480 aa		3.74	□□□□□ -1.81
RDH54	YBR073W	OPI3	P05375	206 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	SPT3	P06844	337 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	URE2	P23202	354 aa	Known RBP	3.73	□□□□□ -1.81
RDH54	YBR073W	MTR2	P34232	184 aa	Known RBP	3.73	□□□□□ -1.81
RDH54	YBR073W	LSM12	P38828	187 aa	Known RBP	3.73	□□□□□ -1.81
RDH54	YBR073W	PGD1	P40356	397 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	IRC18	P47056	224 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	BIR1	P47134	954 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	YPT32	P51996	222 aa	Known RBP	3.73	□□□□□ -1.81
RDH54	YBR073W	POP6	P53218	158 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	MPA43	P53583	542 aa	Predicted RBP	3.73	□□□□□ -1.81
RDH54	YBR073W	AIM41	Q12032	185 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	APC9	Q12107	265 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	COR1	P07256	457 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	YOL163W	P0CF20	169 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	IMA3	P0CW40	589 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	IMA4	P0CW41	589 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	CAP2	P13517	287 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	CTA1	P15202	515 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	DSS4	P32601	143 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	RPA43	P46669	326 aa		3.73	□□□□□ -1.81
RDH54	YBR073W	GUF1	P46943	645 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms