RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MEF2AQ02078 507 aaPredicted RBP7.65□□□□□ -1.18
VPS50-212ENST00000476413 MESP2Q0VG99 397 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 SSPNQ14714 243 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 LARP4Q71RC2 724 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS50-212ENST00000476413 UNC5BQ8IZJ1 945 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 FAM43AQ8N2R8 423 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 GPR156Q8NFN8 814 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 PJA1Q8NG27 643 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 KAT5Q92993 513 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 SIGLEC10Q96LC7 697 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 LRFN3Q9BTN0 628 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 ADI1Q9BV57 179 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 ZNF700Q9H0M5 742 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 TPP1O14773 563 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 PLIN1O60240 522 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 DTNBO60941 627 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 RPL13P26373 211 aaKnown RBP7.64□□□□□ -1.19
VPS50-212ENST00000476413 SLC6A9P48067 706 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 Q6ZVL8 140 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 SAPCD2Q86UD0 394 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 DENND1CQ8IV53 801 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 MSL3Q8N5Y2 521 aaKnown RBP7.64□□□□□ -1.19
VPS50-212ENST00000476413 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 KCNN1Q92952 543 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 PAWRQ96IZ0 340 aaKnown RBP7.64□□□□□ -1.19
VPS50-212ENST00000476413 KATNBL1Q9H079 304 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 MAN1C1Q9NR34 630 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 SIK3Q9Y2K2 1263 aa7.64□□□□□ -1.19
VPS50-212ENST00000476413 APAF1O14727 1248 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 B3GALT2O43825 422 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 UBXN7O94888 489 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 HRGP04196 525 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 LTA4HP09960 611 aaKnown RBP7.63□□□□□ -1.19
VPS50-212ENST00000476413 MED14OSP0DP75 135 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 RHCEP18577 417 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 GLDCP23378 1020 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 RHDQ02161 417 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 NOMO1Q15155 1222 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 UBE3CQ15386 1083 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-212ENST00000476413 FBXO41Q8TF61 875 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 SNX33Q8WV41 574 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 HDAC10Q969S8 669 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 YTHDC1Q96MU7 727 aaKnown RBP7.63□□□□□ -1.19
VPS50-212ENST00000476413 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 TMEM60Q9H2L4 133 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 VWA7Q9Y334 891 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 PCDHB1Q9Y5F3 818 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 PCDHA13Q9Y5I0 950 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 IRAK3Q9Y616 596 aa7.63□□□□□ -1.19
VPS50-212ENST00000476413 RPTORQ8N122 1335 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 FSBPO95073 299 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 ZBED1O96006 694 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 HMGCRP04035 888 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 MAN2A1Q16706 1144 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 ZNF827Q17R98 1081 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 MST1LQ2TV78 715 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 TAS1R1Q7RTX1 841 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 CLEC14AQ86T13 490 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 LILRA3Q8N6C8 439 aaPredicted RBP7.62□□□□□ -1.19
VPS50-212ENST00000476413 NSUN6Q8TEA1 469 aaKnown RBP7.62□□□□□ -1.19
VPS50-212ENST00000476413 ZNF526Q8TF50 670 aaPredicted RBP7.62□□□□□ -1.19
VPS50-212ENST00000476413 DMRTA2Q96SC8 542 aa7.62□□□□□ -1.19
VPS50-212ENST00000476413 CFAP20Q9Y6A4 193 aaKnown RBP7.62□□□□□ -1.19
VPS50-212ENST00000476413 C2orf78A6NCI8 922 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 FAM171A2A8MVW0 826 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 DDX3XO00571 662 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS50-212ENST00000476413 PI3P19957 117 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 CAP1Q01518 475 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 LLGL1Q15334 1064 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 COBLL1Q53SF7 1204 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 C19orf54Q5BKX5 351 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 PPP4R4Q6NUP7 873 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 CNKSR3Q6P9H4 555 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 Q6ZUG5 572 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 MIGA2Q7L4E1 593 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 SRGAP1Q7Z6B7 1085 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 KIAA0319LQ8IZA0 1049 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 CAMKK1Q8N5S9 505 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 FAM156AQ8NDB6 213 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 TTC17Q96AE7 1141 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 AJUBAQ96IF1 538 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 RPS6KC1Q96S38 1066 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 CGRRF1Q99675 332 aa7.61□□□□□ -1.19
VPS50-212ENST00000476413 CTDP1Q9Y5B0 961 aaPredicted RBP7.61□□□□□ -1.19
VPS50-212ENST00000476413 ANO9A1A5B4 782 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 SH3D21A4FU49 640 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 FAM227AF5H4B4 570 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 AKR1B10O60218 316 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 PHKG2P15735 406 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 MAP2K6P52564 334 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 AGFG1P52594 562 aaKnown RBP7.6□□□□□ -1.19
VPS50-212ENST00000476413 ADAM15Q13444 863 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 PCOLCEQ15113 449 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 IL31Q6EBC2 164 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 IFNL2Q8IZJ0 200 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 PWWP2AQ96N64 755 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 B3GNT5Q9BYG0 378 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 KIAA1683Q9H0B3 1180 aa7.6□□□□□ -1.19
VPS50-212ENST00000476413 SGTAO43765 313 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms