RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Snip1Q8BIZ6 383 aaKnown RBP17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tldc1Q8K0P3 455 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Matr3Q8K310 846 aaKnown RBP17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Calml4Q91WQ9 153 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Fam187aQ9D3R5 417 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gyg1Q9R062 333 aa17.18■□□□□ 0.34
Trim39-203ENSMUST00000113706 Clca3bE9PUL3 1044 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Kif3cO35066 796 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Cops5O35864 334 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Lrrc6O88978 473 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Fmr1P35922 614 aaKnown RBP17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Evi5P97366 809 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Drp2Q05AA6 957 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Q3TTJ4 293 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tgfbrap1Q3UR70 860 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 PpatQ8CIH9 517 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ubxn1Q922Y1 297 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Peg12Q9WVA7 283 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Clk2O35491 499 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Pja1O55176 578 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Nhej1Q3KNJ2 295 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Lrrc14bQ3UJB3 510 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Fam214aQ69ZK7 1075 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Olfml3Q8BK62 406 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 AsphQ8BSY0 741 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Kat5Q8CHK4 513 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Arfgap2Q99K28 520 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Golph3Q9CRA5 298 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ankef1Q9D2J7 775 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Rnf103Q9R1W3 683 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 FechP22315 420 aaKnown RBP17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Sh3bp1P55194 680 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Polr2fP61219 127 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Mfsd14aP70187 490 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 RenbpP82343 430 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 BC051142Q3V0M8 400 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tas2r134Q7TQB0 298 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Sppl3Q9CUS9 384 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Trmt10bQ9D075 318 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Sh2b2Q9JID9 621 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Limd1Q9QXD8 668 aa17.17■□□□□ 0.34
Trim39-203ENSMUST00000113706 Fndc3c1Q6DFV6 1356 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Osbpl7A2A716 963 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Serpinb2P12388 415 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 HmmrQ00547 794 aaKnown RBP17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 FntaQ61239 377 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Gja3Q64448 417 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Lin9Q8C735 542 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Zfp623Q9CY99 499 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 JmyQ9QXM1 983 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tjp2Q9Z0U1 1167 aaKnown RBP17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 1700017N19RikA0A087WPJ1 469 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Dnajc21E9Q8D0 531 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Mrgprb1Q3UG61 350 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Q6PD19 689 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Psmd5Q8BJY1 504 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Pkn2Q8BWW9 983 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Fbxo43Q8CDI2 640 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Nmrk1Q91W63 195 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 1700129C05RikQ9CQ77 218 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Adgrf4Q9D2L6 698 aa17.16■□□□□ 0.34
Trim39-203ENSMUST00000113706 Zfp457L7N1X4 647 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Xirp1O70373 1129 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Mt-CybP00158 381 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 XlrP05531 208 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Pik3caP42337 1068 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Irf3P70671 419 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 DeptorQ570Y9 409 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ccdc157Q5SPX1 718 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Ncapg2Q6DFV1 1138 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 NrcamQ810U4 1256 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Trim65Q8BFW4 522 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tdp1Q8BJ37 609 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Klhl11Q8CE33 709 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Usp29Q9ES63 869 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Prg3Q9JL95 222 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Hic1Q9R1Y5 733 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Rabgap1A2AWA9 1064 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Krt35Q497I4 455 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Rhox12Q4TU81 186 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Angptl3Q9R182 455 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tnfsf13bQ9WU72 309 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 StamP70297 548 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Pla2g4cQ64GA5 597 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Zcchc2Q69ZB8 1166 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Tcaf1Q8BNE1 924 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 1700016D06RikQ9DAA5 166 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Rnf6Q9DBU5 667 aa17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Twf2Q9Z0P5 349 aaKnown RBP17.15■□□□□ 0.34
Trim39-203ENSMUST00000113706 Odf2A3KGV1 830 aaKnown RBP17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Olfr67F8VPJ8 320 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 EdnrbP48302 442 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 MafP54843 370 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Mkrn3Q60764 544 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Trnp1Q80ZI1 223 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Vipas39Q8BGQ1 491 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Tbx20Q9ES03 445 aa17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 AatfQ9JKX4 526 aaKnown RBP17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Myo5aQ99104 1853 aaKnown RBP17.14■□□□□ 0.33
Trim39-203ENSMUST00000113706 Gm10110D3Z5M2 615 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms