Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm25239-201ENSMUST00000174915 86 ntBASIC37.45■■■■□ 3.59
Nhej1Q3KNJ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Nhej1Q3KNJ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Nhej1Q3KNJ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
Nhej1Q3KNJ2 Psd-208ENSMUST00000224556 2034 ntBASIC34.53■■■■□ 3.12
Nhej1Q3KNJ2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Nhej1Q3KNJ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Nhej1Q3KNJ2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Nhej1Q3KNJ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Nhej1Q3KNJ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Nhej1Q3KNJ2 Gm15042-201ENSMUST00000120212 883 ntBASIC33.61■■■□□ 2.97
Nhej1Q3KNJ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Nhej1Q3KNJ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Nhej1Q3KNJ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Nhej1Q3KNJ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.14■■■□□ 2.89
Nhej1Q3KNJ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Nhej1Q3KNJ2 Gm15045-201ENSMUST00000117359 883 ntBASIC33.02■■■□□ 2.88
Nhej1Q3KNJ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Nhej1Q3KNJ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Nhej1Q3KNJ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Nhej1Q3KNJ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Nhej1Q3KNJ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Nhej1Q3KNJ2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Nhej1Q3KNJ2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Nhej1Q3KNJ2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Nhej1Q3KNJ2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Nhej1Q3KNJ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.17■■■□□ 2.74
Nhej1Q3KNJ2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
Nhej1Q3KNJ2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Nhej1Q3KNJ2 Gm24109-201ENSMUST00000175489 103 ntBASIC32.05■■■□□ 2.72
Nhej1Q3KNJ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Nhej1Q3KNJ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.97■■■□□ 2.71
Nhej1Q3KNJ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Nhej1Q3KNJ2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Nhej1Q3KNJ2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Nhej1Q3KNJ2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Nhej1Q3KNJ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nhej1Q3KNJ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.63■■■□□ 2.65
Nhej1Q3KNJ2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Nhej1Q3KNJ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.43■■■□□ 2.62
Nhej1Q3KNJ2 Gm23366-201ENSMUST00000175022 89 ntBASIC31.42■■■□□ 2.62
Nhej1Q3KNJ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.42■■■□□ 2.62
Nhej1Q3KNJ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Nhej1Q3KNJ2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Nhej1Q3KNJ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Nhej1Q3KNJ2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Nhej1Q3KNJ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Nhej1Q3KNJ2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Nhej1Q3KNJ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Nhej1Q3KNJ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.9■■■□□ 2.54
Nhej1Q3KNJ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.89■■■□□ 2.54
Nhej1Q3KNJ2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Nhej1Q3KNJ2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Nhej1Q3KNJ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Nhej1Q3KNJ2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Nhej1Q3KNJ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.63■■■□□ 2.49
Nhej1Q3KNJ2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.59■■■□□ 2.49
Nhej1Q3KNJ2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Nhej1Q3KNJ2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Nhej1Q3KNJ2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Nhej1Q3KNJ2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Nhej1Q3KNJ2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Nhej1Q3KNJ2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Nhej1Q3KNJ2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Nhej1Q3KNJ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Nhej1Q3KNJ2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Nhej1Q3KNJ2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Nhej1Q3KNJ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nhej1Q3KNJ2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Nhej1Q3KNJ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Nhej1Q3KNJ2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Nhej1Q3KNJ2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Nhej1Q3KNJ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
Nhej1Q3KNJ2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Nhej1Q3KNJ2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Nhej1Q3KNJ2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Nhej1Q3KNJ2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Nhej1Q3KNJ2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.84■■■□□ 2.37
Nhej1Q3KNJ2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
Nhej1Q3KNJ2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Nhej1Q3KNJ2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Nhej1Q3KNJ2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Nhej1Q3KNJ2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Nhej1Q3KNJ2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Nhej1Q3KNJ2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
Nhej1Q3KNJ2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Nhej1Q3KNJ2 Gm27325-201ENSMUST00000175467 74 ntBASIC29.64■■■□□ 2.34
Nhej1Q3KNJ2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Nhej1Q3KNJ2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Nhej1Q3KNJ2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Nhej1Q3KNJ2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Nhej1Q3KNJ2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Nhej1Q3KNJ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Nhej1Q3KNJ2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Nhej1Q3KNJ2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.54■■■□□ 2.32
Nhej1Q3KNJ2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Nhej1Q3KNJ2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Nhej1Q3KNJ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.37■■■□□ 2.29
Nhej1Q3KNJ2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Nhej1Q3KNJ2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms