Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Gm25239-201ENSMUST00000174915 86 ntBASIC39.44■■■■□ 3.9
Trim65Q8BFW4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Trim65Q8BFW4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Trim65Q8BFW4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Trim65Q8BFW4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Trim65Q8BFW4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
Trim65Q8BFW4 Gm15042-201ENSMUST00000120212 883 ntBASIC34.98■■■■□ 3.19
Trim65Q8BFW4 Gm15045-201ENSMUST00000117359 883 ntBASIC34.31■■■■□ 3.08
Trim65Q8BFW4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Trim65Q8BFW4 Psd-208ENSMUST00000224556 2034 ntBASIC34.22■■■■□ 3.07
Trim65Q8BFW4 Gm24109-201ENSMUST00000175489 103 ntBASIC33.94■■■■□ 3.02
Trim65Q8BFW4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Trim65Q8BFW4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Trim65Q8BFW4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.63■■■□□ 2.97
Trim65Q8BFW4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Trim65Q8BFW4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Trim65Q8BFW4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Trim65Q8BFW4 Gm23366-201ENSMUST00000175022 89 ntBASIC32.99■■■□□ 2.87
Trim65Q8BFW4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Trim65Q8BFW4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Trim65Q8BFW4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Trim65Q8BFW4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Trim65Q8BFW4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Trim65Q8BFW4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Trim65Q8BFW4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
Trim65Q8BFW4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Trim65Q8BFW4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Trim65Q8BFW4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Trim65Q8BFW4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.73■■■□□ 2.83
Trim65Q8BFW4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Trim65Q8BFW4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Trim65Q8BFW4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Trim65Q8BFW4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.37■■■□□ 2.77
Trim65Q8BFW4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Trim65Q8BFW4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Trim65Q8BFW4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Trim65Q8BFW4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.14■■■□□ 2.74
Trim65Q8BFW4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Trim65Q8BFW4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Trim65Q8BFW4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Trim65Q8BFW4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Trim65Q8BFW4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.76■■■□□ 2.67
Trim65Q8BFW4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.51■■■□□ 2.63
Trim65Q8BFW4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim65Q8BFW4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trim65Q8BFW4 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.44■■■□□ 2.62
Trim65Q8BFW4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trim65Q8BFW4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.38■■■□□ 2.61
Trim65Q8BFW4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Trim65Q8BFW4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Trim65Q8BFW4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim65Q8BFW4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim65Q8BFW4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim65Q8BFW4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Trim65Q8BFW4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Trim65Q8BFW4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Trim65Q8BFW4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.99■■■□□ 2.55
Trim65Q8BFW4 Gm25238-201ENSMUST00000174914 89 ntBASIC30.97■■■□□ 2.55
Trim65Q8BFW4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Trim65Q8BFW4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Trim65Q8BFW4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Trim65Q8BFW4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.85■■■□□ 2.53
Trim65Q8BFW4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.85■■■□□ 2.53
Trim65Q8BFW4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.79■■■□□ 2.52
Trim65Q8BFW4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trim65Q8BFW4 Gm27325-201ENSMUST00000175467 74 ntBASIC30.76■■■□□ 2.51
Trim65Q8BFW4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Trim65Q8BFW4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim65Q8BFW4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim65Q8BFW4 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.72■■■□□ 2.51
Trim65Q8BFW4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.71■■■□□ 2.51
Trim65Q8BFW4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.57■■■□□ 2.48
Trim65Q8BFW4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.56■■■□□ 2.48
Trim65Q8BFW4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Trim65Q8BFW4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Trim65Q8BFW4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Trim65Q8BFW4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
Trim65Q8BFW4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Trim65Q8BFW4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Trim65Q8BFW4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Trim65Q8BFW4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trim65Q8BFW4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim65Q8BFW4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trim65Q8BFW4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trim65Q8BFW4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.13■■■□□ 2.41
Trim65Q8BFW4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim65Q8BFW4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Trim65Q8BFW4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim65Q8BFW4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.1■■■□□ 2.41
Trim65Q8BFW4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Trim65Q8BFW4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.08■■■□□ 2.41
Trim65Q8BFW4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim65Q8BFW4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Trim65Q8BFW4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Trim65Q8BFW4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Trim65Q8BFW4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Trim65Q8BFW4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trim65Q8BFW4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
Trim65Q8BFW4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.85■■■□□ 2.37
Trim65Q8BFW4 Rab21-202ENSMUST00000218831 843 ntBASIC29.84■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms