Protein–RNA interactions for Protein: Q3UR70

Tgfbrap1, Transforming growth factor-beta receptor-associated protein 1, mousemouse

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbrap1Q3UR70 Gm25239-201ENSMUST00000174915 86 ntBASIC41.58■■■■■ 4.25
Tgfbrap1Q3UR70 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
Tgfbrap1Q3UR70 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Tgfbrap1Q3UR70 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Tgfbrap1Q3UR70 Gm15042-201ENSMUST00000120212 883 ntBASIC36.48■■■■□ 3.43
Tgfbrap1Q3UR70 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Tgfbrap1Q3UR70 Gm24109-201ENSMUST00000175489 103 ntBASIC35.98■■■■□ 3.35
Tgfbrap1Q3UR70 Gm15045-201ENSMUST00000117359 883 ntBASIC35.76■■■■□ 3.32
Tgfbrap1Q3UR70 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.55■■■■□ 3.28
Tgfbrap1Q3UR70 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Tgfbrap1Q3UR70 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
Tgfbrap1Q3UR70 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Tgfbrap1Q3UR70 Gm23366-201ENSMUST00000175022 89 ntBASIC34.68■■■■□ 3.14
Tgfbrap1Q3UR70 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Tgfbrap1Q3UR70 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Tgfbrap1Q3UR70 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.23■■■■□ 3.07
Tgfbrap1Q3UR70 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Tgfbrap1Q3UR70 Psd-208ENSMUST00000224556 2034 ntBASIC33.99■■■■□ 3.03
Tgfbrap1Q3UR70 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.96■■■■□ 3.03
Tgfbrap1Q3UR70 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Tgfbrap1Q3UR70 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
Tgfbrap1Q3UR70 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Tgfbrap1Q3UR70 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Tgfbrap1Q3UR70 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
Tgfbrap1Q3UR70 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.6■■■□□ 2.97
Tgfbrap1Q3UR70 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Tgfbrap1Q3UR70 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.5■■■□□ 2.95
Tgfbrap1Q3UR70 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.42■■■□□ 2.94
Tgfbrap1Q3UR70 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Tgfbrap1Q3UR70 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.34■■■□□ 2.93
Tgfbrap1Q3UR70 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.03■■■□□ 2.88
Tgfbrap1Q3UR70 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Tgfbrap1Q3UR70 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Tgfbrap1Q3UR70 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.88■■■□□ 2.85
Tgfbrap1Q3UR70 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Tgfbrap1Q3UR70 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Tgfbrap1Q3UR70 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Tgfbrap1Q3UR70 Gm25238-201ENSMUST00000174914 89 ntBASIC32.79■■■□□ 2.84
Tgfbrap1Q3UR70 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Tgfbrap1Q3UR70 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Tgfbrap1Q3UR70 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.62■■■□□ 2.81
Tgfbrap1Q3UR70 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Tgfbrap1Q3UR70 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Tgfbrap1Q3UR70 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.22■■■□□ 2.75
Tgfbrap1Q3UR70 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Tgfbrap1Q3UR70 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Tgfbrap1Q3UR70 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Tgfbrap1Q3UR70 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.11■■■□□ 2.73
Tgfbrap1Q3UR70 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Tgfbrap1Q3UR70 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
Tgfbrap1Q3UR70 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.04■■■□□ 2.72
Tgfbrap1Q3UR70 Gm27325-201ENSMUST00000175467 74 ntBASIC32.01■■■□□ 2.71
Tgfbrap1Q3UR70 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tgfbrap1Q3UR70 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tgfbrap1Q3UR70 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Tgfbrap1Q3UR70 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Tgfbrap1Q3UR70 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Tgfbrap1Q3UR70 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.69■■■□□ 2.66
Tgfbrap1Q3UR70 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tgfbrap1Q3UR70 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.67■■■□□ 2.66
Tgfbrap1Q3UR70 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.61■■■□□ 2.65
Tgfbrap1Q3UR70 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Tgfbrap1Q3UR70 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.55■■■□□ 2.64
Tgfbrap1Q3UR70 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
Tgfbrap1Q3UR70 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
Tgfbrap1Q3UR70 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Tgfbrap1Q3UR70 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tgfbrap1Q3UR70 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tgfbrap1Q3UR70 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tgfbrap1Q3UR70 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tgfbrap1Q3UR70 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Tgfbrap1Q3UR70 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Tgfbrap1Q3UR70 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tgfbrap1Q3UR70 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tgfbrap1Q3UR70 Rab21-202ENSMUST00000218831 843 ntBASIC31.27■■■□□ 2.6
Tgfbrap1Q3UR70 Gm25262-201ENSMUST00000174934 133 ntBASIC31.21■■■□□ 2.59
Tgfbrap1Q3UR70 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.17■■■□□ 2.58
Tgfbrap1Q3UR70 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.16■■■□□ 2.58
Tgfbrap1Q3UR70 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.16■■■□□ 2.58
Tgfbrap1Q3UR70 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.16■■■□□ 2.58
Tgfbrap1Q3UR70 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tgfbrap1Q3UR70 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tgfbrap1Q3UR70 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31■■■□□ 2.55
Tgfbrap1Q3UR70 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Tgfbrap1Q3UR70 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Tgfbrap1Q3UR70 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.98■■■□□ 2.55
Tgfbrap1Q3UR70 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tgfbrap1Q3UR70 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Tgfbrap1Q3UR70 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Tgfbrap1Q3UR70 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Tgfbrap1Q3UR70 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.83■■■□□ 2.53
Tgfbrap1Q3UR70 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tgfbrap1Q3UR70 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tgfbrap1Q3UR70 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tgfbrap1Q3UR70 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Tgfbrap1Q3UR70 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
Tgfbrap1Q3UR70 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Tgfbrap1Q3UR70 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.63■■■□□ 2.49
Tgfbrap1Q3UR70 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.59■■■□□ 2.49
Tgfbrap1Q3UR70 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms