RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 MED6P38782 295 aa2.66□□□□□ -1.98
snR78snR78 CTM1P38818 585 aa2.66□□□□□ -1.98
snR78snR78 YER084WP40057 128 aa2.66□□□□□ -1.98
snR78snR78 RSC1P53236 928 aa2.66□□□□□ -1.98
snR78snR78 ACT1P60010 375 aaKnown RBP2.66□□□□□ -1.98
snR78snR78 MRX9Q07349 420 aaKnown RBP2.66□□□□□ -1.98
snR78snR78 ERP3Q12403 225 aa2.66□□□□□ -1.98
snR78snR78 SFG1Q12507 346 aa2.66□□□□□ -1.98
snR78snR78 DCC1P25559 380 aa2.65□□□□□ -1.99
snR78snR78 RDS1P25611 832 aa2.65□□□□□ -1.99
snR78snR78 PEX32P38292 413 aa2.65□□□□□ -1.99
snR78snR78 YHR122WP38829 231 aa2.65□□□□□ -1.99
snR78snR78 DTD1Q07648 150 aaKnown RBP2.65□□□□□ -1.99
snR78snR78 CBP2P03874 630 aaPredicted RBP2.64□□□□□ -1.99
snR78snR78 SPS100P13130 326 aa2.64□□□□□ -1.99
snR78snR78 EDC2P40023 145 aaPredicted RBP2.64□□□□□ -1.99
snR78snR78 YMR134WP40207 237 aa2.64□□□□□ -1.99
snR78snR78 FEX1Q08913 375 aa2.64□□□□□ -1.99
snR78snR78 FEX2Q08991 375 aa2.64□□□□□ -1.99
snR78snR78 PRM4Q12498 284 aa2.64□□□□□ -1.99
snR78snR78 CIN8P27895 1000 aa2.63□□□□□ -1.99
snR78snR78 MNN5P46982 586 aa2.63□□□□□ -1.99
snR78snR78 YLL053CP0CD98 152 aa2.62□□□□□ -1.99
snR78snR78 MYO3P36006 1272 aa2.62□□□□□ -1.99
snR78snR78 RPA34P47006 233 aaPredicted RBP2.62□□□□□ -1.99
snR78snR78 YPL245WQ12179 454 aaKnown RBP2.62□□□□□ -1.99
snR78snR78 HXT2P23585 541 aa2.61□□□□□ -1.99
snR78snR78 PUP2P32379 260 aa2.61□□□□□ -1.99
snR78snR78 YER188WP40103 239 aa2.61□□□□□ -1.99
snR78snR78 PCL7P40186 285 aa2.61□□□□□ -1.99
snR78snR78 RGS2Q99188 309 aa2.61□□□□□ -1.99
snR78snR78 BUD2P33314 1104 aa2.6□□□□□ -1.99
snR78snR78 RDL2Q08742 149 aaKnown RBP2.6□□□□□ -1.99
snR78snR78 CDC42P19073 191 aa2.59□□□□□ -1.99
snR78snR78 PRE7P23724 241 aaKnown RBP2.59□□□□□ -1.99
snR78snR78 MEI5P32489 222 aa2.59□□□□□ -1.99
snR78snR78 SUR1P33300 382 aa2.59□□□□□ -1.99
snR78snR78 DAD2P36162 133 aa2.59□□□□□ -1.99
snR78snR78 FYV8P46949 817 aaKnown RBP2.59□□□□□ -1.99
snR78snR78 YNR066CP53752 436 aa2.59□□□□□ -1.99
snR78snR78 YNL095CP53932 642 aa2.59□□□□□ -1.99
snR78snR78 YAK1P14680 807 aa2.58□□□□□ -2
snR78snR78 SAG1P20840 650 aa2.58□□□□□ -2
snR78snR78 JEM1P40358 645 aa2.58□□□□□ -2
snR78snR78 YOL163WP0CF20 169 aa2.57□□□□□ -2
snR78snR78 RBK1P25332 333 aa2.57□□□□□ -2
snR78snR78 PET8P38921 284 aa2.57□□□□□ -2
snR78snR78 UFD1P53044 361 aa2.57□□□□□ -2
snR78snR78 SYF2P53277 215 aaPredicted RBP2.57□□□□□ -2
snR78snR78 STE3P06783 470 aa2.55□□□□□ -2
snR78snR78 ALP1P38971 573 aa2.55□□□□□ -2
snR78snR78 BTT1P40314 149 aaPredicted RBP2.55□□□□□ -2
snR78snR78 NBP1P52919 319 aaPredicted RBP2.55□□□□□ -2
snR78snR78 PXR1P53335 271 aaPredicted RBP2.55□□□□□ -2
snR78snR78 EOS1P53938 366 aa2.55□□□□□ -2
snR78snR78 SKS1Q12505 502 aa2.55□□□□□ -2
snR78snR78 VPS1P21576 704 aaKnown RBP2.54□□□□□ -2
snR78snR78 AIM29P36154 155 aa2.54□□□□□ -2
snR78snR78 PRP39P39682 629 aaKnown RBP2.54□□□□□ -2
snR78snR78 YNL143CP53908 130 aa2.54□□□□□ -2
snR78snR78 VIK1Q12045 647 aa2.54□□□□□ -2
snR78snR78 ERD1P16151 362 aa2.53□□□□□ -2
snR78snR78 CAB3P36076 571 aa2.53□□□□□ -2
snR78snR78 ADH5P38113 351 aaKnown RBP2.53□□□□□ -2
snR78snR78 TAF6P53040 516 aa2.53□□□□□ -2
snR78snR78 YOR292CQ08743 309 aa2.53□□□□□ -2
snR78snR78 TIM22Q12328 207 aa2.53□□□□□ -2
snR78snR78 FRE6Q12473 712 aa2.53□□□□□ -2
snR78snR78 ARC18Q05933 178 aaKnown RBP2.52□□□□□ -2.01
snR78snR78 YLR012CQ07927 99 aa2.52□□□□□ -2.01
snR78snR78 NBL1Q3E7Y6 73 aa2.52□□□□□ -2.01
snR78snR78 RXT2P38255 430 aa2.51□□□□□ -2.01
snR78snR78 PFK27Q12471 397 aaPredicted RBP2.51□□□□□ -2.01
snR78snR78 SPO24Q3E752 67 aa2.51□□□□□ -2.01
snR78snR78 VMA5P31412 392 aaKnown RBP2.5□□□□□ -2.01
snR78snR78 VPH2P32341 215 aa2.5□□□□□ -2.01
snR78snR78 PES4P39684 611 aa2.5□□□□□ -2.01
snR78snR78 YIL089WP40500 205 aa2.5□□□□□ -2.01
snR78snR78 YNL146WP53906 100 aa2.5□□□□□ -2.01
snR78snR78 SEC13Q04491 297 aaKnown RBP2.5□□□□□ -2.01
snR78snR78 ACB1P31787 87 aa2.49□□□□□ -2.01
snR78snR78 MRPL6P32904 214 aa2.49□□□□□ -2.01
snR78snR78 MIG2P53035 382 aa2.49□□□□□ -2.01
snR78snR78 YGR016WP53209 190 aa2.49□□□□□ -2.01
snR78snR78 AQR1P53943 586 aa2.49□□□□□ -2.01
snR78snR78 ERP4Q12450 207 aa2.49□□□□□ -2.01
snR78snR78 YHL044WP38727 235 aa2.48□□□□□ -2.01
snR78snR78 UBX2Q04228 584 aa2.48□□□□□ -2.01
snR78snR78 YOR283WQ12040 230 aaKnown RBP2.48□□□□□ -2.01
snR78snR78 YGL114WP53134 725 aa2.47□□□□□ -2.01
snR78snR78 OSH6Q02201 448 aa2.47□□□□□ -2.01
snR78snR78 RVB1Q03940 463 aaKnown RBP2.47□□□□□ -2.01
snR78snR78 BUR2Q05949 395 aa2.47□□□□□ -2.01
snR78snR78 PLB3Q08108 686 aa2.47□□□□□ -2.01
snR78snR78 SSU72P53538 206 aaPredicted RBP2.46□□□□□ -2.02
snR78snR78 YPL278CQ08990 100 aa2.46□□□□□ -2.02
snR78snR78 PRR2Q12310 699 aa2.46□□□□□ -2.02
snR78snR78 CLB6P32943 380 aa2.45□□□□□ -2.02
snR78snR78 SOP4P39543 234 aaPredicted RBP2.45□□□□□ -2.02
snR78snR78 SYS1P41544 203 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms