RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 SMF1P38925 575 aa-0.46□□□□□ -2.48
snR50snR50 YHB1P39676 399 aaKnown RBP-0.46□□□□□ -2.48
snR50snR50 PES4P39684 611 aa-0.46□□□□□ -2.48
snR50snR50 SYS1P41544 203 aa-0.46□□□□□ -2.48
snR50snR50 LIF1P53150 421 aa-0.46□□□□□ -2.48
snR50snR50 MPA43P53583 542 aaPredicted RBP-0.46□□□□□ -2.48
snR50snR50 OCA2P53949 197 aa-0.46□□□□□ -2.48
snR50snR50 BUD25P85052 153 aa-0.46□□□□□ -2.48
snR50snR50 TVP15Q03860 143 aa-0.46□□□□□ -2.48
snR50snR50 YMR130WQ04223 302 aa-0.46□□□□□ -2.48
snR50snR50 NAT4Q04751 285 aa-0.46□□□□□ -2.48
snR50snR50 YDR341CQ05506 607 aaKnown RBP-0.46□□□□□ -2.48
snR50snR50 NOP6Q07623 225 aaKnown RBP-0.46□□□□□ -2.48
snR50snR50 LCL2Q08045 131 aa-0.46□□□□□ -2.48
snR50snR50 TAF10Q12030 206 aa-0.46□□□□□ -2.48
snR50snR50 GLE1Q12315 538 aa-0.46□□□□□ -2.48
snR50snR50 ISA2Q12425 185 aa-0.46□□□□□ -2.48
snR50snR50 MTR10Q99189 972 aa-0.46□□□□□ -2.48
snR50snR50 GAL7P08431 366 aa-0.47□□□□□ -2.48
snR50snR50 GPA2P10823 449 aa-0.47□□□□□ -2.48
snR50snR50 SCL1P21243 252 aaKnown RBP-0.47□□□□□ -2.48
snR50snR50 SPL2P38839 148 aa-0.47□□□□□ -2.48
snR50snR50 SUR2P38992 349 aa-0.47□□□□□ -2.48
snR50snR50 BMT5P40493 336 aa-0.47□□□□□ -2.48
snR50snR50 SPO22P40511 975 aa-0.47□□□□□ -2.48
snR50snR50 PAC11P40960 533 aa-0.47□□□□□ -2.48
snR50snR50 COG7P53195 279 aa-0.47□□□□□ -2.48
snR50snR50 TPC1P53257 314 aa-0.47□□□□□ -2.48
snR50snR50 UBC7Q02159 165 aa-0.47□□□□□ -2.48
snR50snR50 SHS1Q07657 551 aa-0.47□□□□□ -2.48
snR50snR50 RPN5Q12250 445 aaKnown RBP-0.47□□□□□ -2.48
snR50snR50 OPI3P05375 206 aa-0.48□□□□□ -2.49
snR50snR50 ARO3P14843 370 aaKnown RBP-0.48□□□□□ -2.49
snR50snR50 RNA15P25299 296 aaPredicted RBP-0.48□□□□□ -2.49
snR50snR50 BUD2P33314 1104 aa-0.48□□□□□ -2.49
snR50snR50 MBA1P38300 278 aa-0.48□□□□□ -2.49
snR50snR50 DOG1P38774 246 aa-0.48□□□□□ -2.49
snR50snR50 YHR182WP38870 785 aa-0.48□□□□□ -2.49
snR50snR50 YJR079WP47126 109 aa-0.48□□□□□ -2.49
snR50snR50 RTT102P53330 157 aa-0.48□□□□□ -2.49
snR50snR50 MDM1Q01846 1127 aa-0.48□□□□□ -2.49
snR50snR50 YDR541CQ03049 344 aa-0.48□□□□□ -2.49
snR50snR50 PRM15Q03262 622 aa-0.48□□□□□ -2.49
snR50snR50 ACL4Q03771 387 aa-0.48□□□□□ -2.49
snR50snR50 ERB1Q04660 807 aaKnown RBP-0.48□□□□□ -2.49
snR50snR50 AAD15Q08361 143 aa-0.48□□□□□ -2.49
snR50snR50 RRI2Q12348 645 aa-0.48□□□□□ -2.49
snR50snR50 MHP1P43638 1398 aa-0.48□□□□□ -2.49
snR50snR50 REP1P03871 373 aa-0.49□□□□□ -2.49
snR50snR50 DDI2P0CH63 225 aa-0.49□□□□□ -2.49
snR50snR50 DDI3P0CH64 225 aa-0.49□□□□□ -2.49
snR50snR50 GFD2P25370 566 aaKnown RBP-0.49□□□□□ -2.49
snR50snR50 PEX4P29340 183 aa-0.49□□□□□ -2.49
snR50snR50 QDR3P38227 689 aa-0.49□□□□□ -2.49
snR50snR50 EFM4P40516 257 aa-0.49□□□□□ -2.49
snR50snR50 YNL320WP42840 284 aa-0.49□□□□□ -2.49
snR50snR50 FYV8P46949 817 aaKnown RBP-0.49□□□□□ -2.49
snR50snR50 ERG25P53045 309 aa-0.49□□□□□ -2.49
snR50snR50 YNR062CP53748 327 aa-0.49□□□□□ -2.49
snR50snR50 VPS72Q03388 795 aa-0.49□□□□□ -2.49
snR50snR50 SMP3Q04174 516 aa-0.49□□□□□ -2.49
snR50snR50 NNT1Q05874 261 aa-0.49□□□□□ -2.49
snR50snR50 ARC18Q05933 178 aaKnown RBP-0.49□□□□□ -2.49
snR50snR50 DTD1Q07648 150 aaKnown RBP-0.49□□□□□ -2.49
snR50snR50 MIM1Q08176 113 aa-0.49□□□□□ -2.49
snR50snR50 YPL245WQ12179 454 aaKnown RBP-0.49□□□□□ -2.49
snR50snR50 RPN6Q12377 434 aa-0.49□□□□□ -2.49
snR50snR50 PRM4Q12498 284 aa-0.49□□□□□ -2.49
snR50snR50 NOT5Q12514 560 aaPredicted RBP-0.49□□□□□ -2.49
snR50snR50 AQY2P0CD90 149 aa-0.5□□□□□ -2.49
snR50snR50 AAC3P18238 307 aa-0.5□□□□□ -2.49
snR50snR50 CCA1P21269 546 aa-0.5□□□□□ -2.49
snR50snR50 EFB1P32471 206 aaKnown RBP-0.5□□□□□ -2.49
snR50snR50 GCG1P32656 232 aaKnown RBP-0.5□□□□□ -2.49
snR50snR50 NRP1P32770 719 aaKnown RBP RIP-Chip data-0.5□□□□□ -2.49not detected
snR50snR50 SUR1P33300 382 aa-0.5□□□□□ -2.49
snR50snR50 TPO5P36029 618 aa-0.5□□□□□ -2.49
snR50snR50 DRE2P36152 348 aa-0.5□□□□□ -2.49
snR50snR50 SPT8P38915 602 aa-0.5□□□□□ -2.49
snR50snR50 YER076CP40049 302 aa-0.5□□□□□ -2.49
snR50snR50 PRM10P42946 383 aa-0.5□□□□□ -2.49
snR50snR50 YFL064CP43540 174 aa-0.5□□□□□ -2.49
snR50snR50 SNX4P47057 423 aa-0.5□□□□□ -2.49
snR50snR50 PEX12Q04370 399 aa-0.5□□□□□ -2.49
snR50snR50 YDL144CQ07589 356 aa-0.5□□□□□ -2.49
snR50snR50 YLL007CQ07799 665 aa-0.5□□□□□ -2.49
snR50snR50 MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.5□□□□□ -2.49not detected
snR50snR50 SCM3Q12334 223 aa-0.5□□□□□ -2.49
snR50snR50 ISD11Q6Q560 94 aa-0.5□□□□□ -2.49
snR50snR50 DET1Q99288 334 aaKnown RBP-0.5□□□□□ -2.49
snR50snR50 SAS5Q99314 248 aa-0.5□□□□□ -2.49
snR50snR50 ARG3P05150 338 aa-0.51□□□□□ -2.49
snR50snR50 MAS1P10507 462 aa-0.51□□□□□ -2.49
snR50snR50 POX1P13711 748 aa-0.51□□□□□ -2.49
snR50snR50 VMA2P16140 517 aaKnown RBP-0.51□□□□□ -2.49
snR50snR50 HXT2P23585 541 aa-0.51□□□□□ -2.49
snR50snR50 TOM40P23644 387 aaKnown RBP-0.51□□□□□ -2.49
snR50snR50 PBN1P25580 416 aa-0.51□□□□□ -2.49
snR50snR50 RPL16BP26785 198 aaKnown RBP-0.51□□□□□ -2.49
snR50snR50 PUP2P32379 260 aa-0.51□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms