RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 YOR214CQ12282 236 aa2.23□□□□□ -2.05
snR43snR43 SET6Q12529 373 aa2.23□□□□□ -2.05
snR43snR43 BPH1P25356 2167 aa2.22□□□□□ -2.05
snR43snR43 ATP4P05626 244 aa2.22□□□□□ -2.05
snR43snR43 ZWF1P11412 505 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 RPO26P20435 155 aa2.22□□□□□ -2.05
snR43snR43 CLB2P24869 491 aa2.22□□□□□ -2.05
snR43snR43 NUP2P32499 720 aa2.22□□□□□ -2.05
snR43snR43 MTC7P32633 139 aa2.22□□□□□ -2.05
snR43snR43 TEF4P36008 412 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 YHL044WP38727 235 aa2.22□□□□□ -2.05
snR43snR43 ARN1P38731 627 aa2.22□□□□□ -2.05
snR43snR43 RRP4P38792 359 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 LIN1P38852 340 aaPredicted RBP2.22□□□□□ -2.05
snR43snR43 VPS41P38959 992 aa2.22□□□□□ -2.05
snR43snR43 MIT1P40002 666 aa2.22□□□□□ -2.05
snR43snR43 YER188WP40103 239 aa2.22□□□□□ -2.05
snR43snR43 PMT6P42934 759 aa2.22□□□□□ -2.05
snR43snR43 MOB2P43563 287 aa2.22□□□□□ -2.05
snR43snR43 NCA3P46955 337 aa2.22□□□□□ -2.05
snR43snR43 YDL183CP48569 320 aa2.22□□□□□ -2.05
snR43snR43 MRK1P50873 501 aa2.22□□□□□ -2.05
snR43snR43 PEF1P53238 335 aa2.22□□□□□ -2.05
snR43snR43 YGR126WP53274 230 aa2.22□□□□□ -2.05
snR43snR43 DCP2P53550 970 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 SNF12P53628 566 aa2.22□□□□□ -2.05
snR43snR43 DUG3P53871 357 aa2.22□□□□□ -2.05
snR43snR43 YNL010WP53981 241 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 RPL6AQ02326 176 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 RSM28Q03430 361 aa2.22□□□□□ -2.05
snR43snR43 SSQ1Q05931 657 aaPredicted RBP2.22□□□□□ -2.05
snR43snR43 UTP21Q06078 939 aaPredicted RBP2.22□□□□□ -2.05
snR43snR43 YTH1Q06102 208 aaPredicted RBP2.22□□□□□ -2.05
snR43snR43 YPR147CQ06522 304 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 YEH2Q07950 538 aa2.22□□□□□ -2.05
snR43snR43 IZH3Q07959 543 aa2.22□□□□□ -2.05
snR43snR43 YOR378WQ08902 515 aa2.22□□□□□ -2.05
snR43snR43 NIP7Q08962 181 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 TAF3Q12297 353 aa2.22□□□□□ -2.05
snR43snR43 RDL1Q12305 139 aaKnown RBP2.22□□□□□ -2.05
snR43snR43 NOT5Q12514 560 aaPredicted RBP2.22□□□□□ -2.05
snR43snR43 MHF1Q3E835 90 aa2.22□□□□□ -2.05
snR43snR43 SAS5Q99314 248 aa2.22□□□□□ -2.05
snR43snR43 CAR1P00812 333 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 ATP2P00830 511 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 PHO81P17442 1178 aa2.21□□□□□ -2.06
snR43snR43 NUP1P20676 1076 aa2.21□□□□□ -2.06
snR43snR43 CLB3P24870 427 aa2.21□□□□□ -2.06
snR43snR43 DAL80P26343 269 aa2.21□□□□□ -2.06
snR43snR43 SOF1P33750 489 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 FLO10P36170 1169 aa2.21□□□□□ -2.06
snR43snR43 APL3P38065 1025 aa2.21□□□□□ -2.06
snR43snR43 YBR032WP38223 100 aa2.21□□□□□ -2.06
snR43snR43 YER084WP40057 128 aa2.21□□□□□ -2.06
snR43snR43 HXT9P40885 567 aa2.21□□□□□ -2.06
snR43snR43 SIP18P50263 79 aa2.21□□□□□ -2.06
snR43snR43 IMA1P53051 589 aa2.21□□□□□ -2.06
snR43snR43 YGR054WP53235 642 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 CUS2P53830 285 aaPredicted RBP2.21□□□□□ -2.06
snR43snR43 HXT11P54862 567 aa2.21□□□□□ -2.06
snR43snR43 LAP3Q01532 483 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
snR43snR43 SED1Q01589 338 aa2.21□□□□□ -2.06
snR43snR43 SKO1Q02100 647 aa2.21□□□□□ -2.06
snR43snR43 KAP120Q02932 1032 aa2.21□□□□□ -2.06
snR43snR43 YML122CQ03207 126 aa2.21□□□□□ -2.06
snR43snR43 CTL1Q03220 320 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 PRM15Q03262 622 aa2.21□□□□□ -2.06
snR43snR43 RSN1Q03516 953 aa2.21□□□□□ -2.06
snR43snR43 SCS7Q03529 384 aa2.21□□□□□ -2.06
snR43snR43 RCE1Q03530 315 aa2.21□□□□□ -2.06
snR43snR43 YKU80Q04437 629 aa2.21□□□□□ -2.06
snR43snR43 YHC1Q05900 231 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 IRC19Q07843 230 aa2.21□□□□□ -2.06
snR43snR43 BRX1Q08235 291 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 SRL2Q12020 392 aa2.21□□□□□ -2.06
snR43snR43 SLF1Q12034 447 aaKnown RBP2.21□□□□□ -2.06
snR43snR43 RLM1Q12224 676 aa2.21□□□□□ -2.06
snR43snR43 RTR2Q12378 196 aa2.21□□□□□ -2.06
snR43snR43 SNF8Q12483 233 aa2.21□□□□□ -2.06
snR43snR43 YAL064W-BO13512 126 aa2.2□□□□□ -2.06
snR43snR43 UGA1P17649 471 aa2.2□□□□□ -2.06
snR43snR43 SPO7P18410 259 aa2.2□□□□□ -2.06
snR43snR43 DBF2P22204 572 aa2.2□□□□□ -2.06
snR43snR43 RPS1BP23248 255 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 EXG1P23776 448 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 RPS5P26783 225 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 MNS1P32906 549 aa2.2□□□□□ -2.06
snR43snR43 RPT5P33297 434 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 HCS1P34243 683 aa2.2□□□□□ -2.06
snR43snR43 PTC1P35182 281 aa2.2□□□□□ -2.06
snR43snR43 COS9P36034 407 aa2.2□□□□□ -2.06
snR43snR43 ROT2P38138 954 aa2.2□□□□□ -2.06
snR43snR43 YBL029WP38201 376 aa2.2□□□□□ -2.06
snR43snR43 TSC10P38342 320 aa2.2□□□□□ -2.06
snR43snR43 ECM34P38728 170 aa2.2□□□□□ -2.06
snR43snR43 ECM14P38836 430 aa2.2□□□□□ -2.06
snR43snR43 YHR180WP38868 163 aa2.2□□□□□ -2.06
snR43snR43 MNN9P39107 395 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 POP1P41812 875 aa2.2□□□□□ -2.06
snR43snR43 EGT2P42835 1041 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms