RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH49, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH49	YOR319W	YKL071W	P36086	256 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	HSM3	P38348	480 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	SOP4	P39543	234 aa	Predicted RBP	3.22	□□□□□ -1.89
HSH49	YOR319W	OXA1	P39952	402 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	HEM14	P40012	539 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	YIA6	P40556	373 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	LSB1	P53281	241 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	PRP38	Q00723	242 aa	Predicted RBP	3.22	□□□□□ -1.89
HSH49	YOR319W	SLT2	Q00772	484 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	SRL4	Q03085	281 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	FAR10	Q06001	478 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	BTS1	Q12051	335 aa		3.22	□□□□□ -1.89
HSH49	YOR319W	ADH2	P00331	348 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	ILV1	P00927	576 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	RPS14A	P06367	137 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	POL30	P15873	258 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	URA10	P30402	227 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	CHL4	P38907	458 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	RPS14B	P39516	138 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	PRM9	P39551	298 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	SHQ1	P40486	507 aa	Predicted RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	GDS1	P41913	522 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	YPI1	P43587	155 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	BNA6	P43619	295 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	UBC13	P52490	153 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	YNL134C	P53912	376 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	PET117	Q02771	107 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	GRX3	Q03835	250 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	YET2	Q04210	160 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	ADH6	Q04894	360 aa	Known RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	CTS2	Q06350	511 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	ARV1	Q06541	321 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	TLG2	Q08144	397 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	RSA1	Q08932	381 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	POM33	Q12164	279 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	RBD2	Q12270	262 aa		3.21	□□□□□ -1.9
HSH49	YOR319W	RRP42	Q12277	265 aa	Predicted RBP	3.21	□□□□□ -1.9
HSH49	YOR319W	SPS100	P13130	326 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	ERD1	P16151	362 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	MET16	P18408	261 aa	Predicted RBP	3.2	□□□□□ -1.9
HSH49	YOR319W	RRT12	P25381	491 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	BMT2	P38278	337 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	DED81	P38707	554 aa	Known RBP	3.2	□□□□□ -1.9
HSH49	YOR319W	BAT1	P38891	393 aa	Known RBP	3.2	□□□□□ -1.9
HSH49	YOR319W	COA1	P40452	197 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	FMC1	P40491	155 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	YJL118W	P47022	219 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	BIO3	P50277	480 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	CWC21	Q03375	135 aa	Known RBP	3.2	□□□□□ -1.9
HSH49	YOR319W	ENT5	Q03769	411 aa	Known RBP	3.2	□□□□□ -1.9
HSH49	YOR319W	YPR064W	Q12492	139 aa		3.2	□□□□□ -1.9
HSH49	YOR319W	RAD3	P06839	778 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	VPS1	P21576	704 aa	Known RBP	3.19	□□□□□ -1.9
HSH49	YOR319W	IFM1	P25038	676 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	CDC50	P25656	391 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	INO2	P26798	304 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	NTG1	P31378	399 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	MRPL10	P36520	322 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	SOL2	P37262	315 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	SHE1	P38200	338 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	OM14	P38325	134 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	RCK1	P38622	512 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	YHR045W	P38775	560 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
HSH49	YOR319W	PEX22	P39718	180 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	MIG3	P39943	394 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	UTP18	P40362	594 aa	Predicted RBP	3.19	□□□□□ -1.9
HSH49	YOR319W	GAB1	P41733	394 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	GCN20	P43535	752 aa	Known RBP	3.19	□□□□□ -1.9
HSH49	YOR319W	TIS11	P47977	285 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	YGR015C	P53208	328 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	VHT1	P53241	593 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	SCS7	Q03529	384 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	YMR209C	Q03648	457 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	YLR177W	Q06251	628 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	MHP1	P43638	1398 aa		3.19	□□□□□ -1.9
HSH49	YOR319W	CMK2	P22517	447 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	ZIP1	P31111	875 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
HSH49	YOR319W	YPC1	P38298	316 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	EFM1	P38732	585 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	NPT1	P39683	429 aa	Known RBP	3.18	□□□□□ -1.9
HSH49	YOR319W	YJR054W	P47114	497 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	CDH1	P53197	566 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	CPD1	P53314	239 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	RNH201	P53942	307 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	VBA1	Q04301	562 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	YLR446W	Q06204	433 aa		3.18	□□□□□ -1.9
HSH49	YOR319W	RRG7	Q08774	242 aa	Predicted RBP	3.18	□□□□□ -1.9
HSH49	YOR319W	YPL245W	Q12179	454 aa	Known RBP	3.18	□□□□□ -1.9
HSH49	YOR319W	PRB1	P09232	635 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	TFS1	P14306	219 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	ZRC1	P20107	442 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	ISY1	P21374	235 aa	Predicted RBP	3.17	□□□□□ -1.9
HSH49	YOR319W	DAL82	P21705	255 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	CWP1	P28319	239 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	ARO4	P32449	370 aa	Known RBP	3.17	□□□□□ -1.9
HSH49	YOR319W	PFS1	P38872	237 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	TIM17	P39515	158 aa		3.17	□□□□□ -1.9
HSH49	YOR319W	DDI1	P40087	428 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms